Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
LRRC38Q5VT99 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
LRRC38Q5VT99 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.82■□□□□ 0.92
LRRC38Q5VT99 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LRRC38Q5VT99 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LRRC38Q5VT99 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.81■□□□□ 0.92
LRRC38Q5VT99 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.81■□□□□ 0.92
LRRC38Q5VT99 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.81■□□□□ 0.92
LRRC38Q5VT99 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.81■□□□□ 0.92
LRRC38Q5VT99 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LRRC38Q5VT99 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LRRC38Q5VT99 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.81■□□□□ 0.92
LRRC38Q5VT99 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
LRRC38Q5VT99 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
LRRC38Q5VT99 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
LRRC38Q5VT99 AC023632.3-201ENST00000521633 145 ntBASIC20.81■□□□□ 0.92
LRRC38Q5VT99 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.81■□□□□ 0.92
LRRC38Q5VT99 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.81■□□□□ 0.92
LRRC38Q5VT99 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.81■□□□□ 0.92
LRRC38Q5VT99 AC133552.2-202ENST00000575694 574 ntBASIC20.81■□□□□ 0.92
LRRC38Q5VT99 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.81■□□□□ 0.92
LRRC38Q5VT99 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.81■□□□□ 0.92
LRRC38Q5VT99 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LRRC38Q5VT99 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.81■□□□□ 0.92
LRRC38Q5VT99 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LRRC38Q5VT99 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
LRRC38Q5VT99 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
LRRC38Q5VT99 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LRRC38Q5VT99 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
LRRC38Q5VT99 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LRRC38Q5VT99 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
LRRC38Q5VT99 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
LRRC38Q5VT99 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
LRRC38Q5VT99 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LRRC38Q5VT99 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
LRRC38Q5VT99 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LRRC38Q5VT99 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.8■□□□□ 0.92
LRRC38Q5VT99 HLA-G-202ENST00000376815 851 ntBASIC20.8■□□□□ 0.92
LRRC38Q5VT99 HLA-G-203ENST00000376818 1127 ntBASIC20.8■□□□□ 0.92
LRRC38Q5VT99 AC004911.1-201ENST00000416316 871 ntBASIC20.8■□□□□ 0.92
LRRC38Q5VT99 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.8■□□□□ 0.92
LRRC38Q5VT99 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.8■□□□□ 0.92
LRRC38Q5VT99 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.8■□□□□ 0.92
LRRC38Q5VT99 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LRRC38Q5VT99 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.8■□□□□ 0.92
LRRC38Q5VT99 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LRRC38Q5VT99 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRRC38Q5VT99 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRRC38Q5VT99 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LRRC38Q5VT99 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
LRRC38Q5VT99 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRRC38Q5VT99 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRRC38Q5VT99 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRRC38Q5VT99 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LRRC38Q5VT99 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRRC38Q5VT99 AC093787.1-201ENST00000450396 207 ntBASIC20.79■□□□□ 0.92
LRRC38Q5VT99 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.79■□□□□ 0.92
LRRC38Q5VT99 AC092437.1-201ENST00000624794 1048 ntBASIC20.79■□□□□ 0.92
LRRC38Q5VT99 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.79■□□□□ 0.92
LRRC38Q5VT99 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
LRRC38Q5VT99 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LRRC38Q5VT99 TREX1-205ENST00000625293 1783 ntBASIC20.79■□□□□ 0.92
LRRC38Q5VT99 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.79■□□□□ 0.92
LRRC38Q5VT99 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
LRRC38Q5VT99 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRRC38Q5VT99 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.78■□□□□ 0.92
LRRC38Q5VT99 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.78■□□□□ 0.92
LRRC38Q5VT99 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
LRRC38Q5VT99 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LRRC38Q5VT99 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.78■□□□□ 0.92
LRRC38Q5VT99 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRRC38Q5VT99 AL158211.5-201ENST00000623583 2518 ntBASIC20.78■□□□□ 0.92
LRRC38Q5VT99 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRRC38Q5VT99 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRRC38Q5VT99 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LRRC38Q5VT99 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.78■□□□□ 0.92
LRRC38Q5VT99 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRRC38Q5VT99 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LRRC38Q5VT99 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRRC38Q5VT99 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.78■□□□□ 0.92
LRRC38Q5VT99 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LRRC38Q5VT99 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.78■□□□□ 0.92
LRRC38Q5VT99 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRRC38Q5VT99 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.78■□□□□ 0.92
LRRC38Q5VT99 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LRRC38Q5VT99 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.78■□□□□ 0.92
LRRC38Q5VT99 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
LRRC38Q5VT99 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.78■□□□□ 0.92
LRRC38Q5VT99 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.78■□□□□ 0.92
LRRC38Q5VT99 AC007952.6-201ENST00000573168 2673 ntBASIC20.78■□□□□ 0.92
LRRC38Q5VT99 AC003957.1-201ENST00000625108 2673 ntBASIC20.78■□□□□ 0.92
LRRC38Q5VT99 KRT17P1-201ENST00000399211 1546 ntBASIC20.78■□□□□ 0.92
LRRC38Q5VT99 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LRRC38Q5VT99 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRRC38Q5VT99 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRRC38Q5VT99 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LRRC38Q5VT99 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
LRRC38Q5VT99 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LRRC38Q5VT99 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.77■□□□□ 0.92
LRRC38Q5VT99 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms