Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC30.54■■■□□ 2.48
CDC42BPAQ5VT25 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
CDC42BPAQ5VT25 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
CDC42BPAQ5VT25 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC30.54■■■□□ 2.48
CDC42BPAQ5VT25 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC30.54■■■□□ 2.48
CDC42BPAQ5VT25 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC30.54■■■□□ 2.48
CDC42BPAQ5VT25 CR392000.1-201ENST00000624770 1228 ntBASIC30.54■■■□□ 2.48
CDC42BPAQ5VT25 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC30.54■■■□□ 2.48
CDC42BPAQ5VT25 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC30.54■■■□□ 2.48
CDC42BPAQ5VT25 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC30.54■■■□□ 2.48
CDC42BPAQ5VT25 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC30.54■■■□□ 2.48
CDC42BPAQ5VT25 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC30.54■■■□□ 2.48
CDC42BPAQ5VT25 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
CDC42BPAQ5VT25 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
CDC42BPAQ5VT25 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC30.53■■■□□ 2.48
CDC42BPAQ5VT25 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
CDC42BPAQ5VT25 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
CDC42BPAQ5VT25 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
CDC42BPAQ5VT25 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC30.53■■■□□ 2.48
CDC42BPAQ5VT25 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC30.53■■■□□ 2.48
CDC42BPAQ5VT25 RNF146-204ENST00000476956 884 ntTSL 2 BASIC30.53■■■□□ 2.48
CDC42BPAQ5VT25 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC30.53■■■□□ 2.48
CDC42BPAQ5VT25 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
CDC42BPAQ5VT25 NME3-204ENST00000563498 920 ntTSL 2 BASIC30.53■■■□□ 2.48
CDC42BPAQ5VT25 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC30.53■■■□□ 2.48
CDC42BPAQ5VT25 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC30.53■■■□□ 2.48
CDC42BPAQ5VT25 DGCR10-201ENST00000609839 495 ntBASIC30.53■■■□□ 2.48
CDC42BPAQ5VT25 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC30.53■■■□□ 2.48
CDC42BPAQ5VT25 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC30.53■■■□□ 2.48
CDC42BPAQ5VT25 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC30.53■■■□□ 2.48
CDC42BPAQ5VT25 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
CDC42BPAQ5VT25 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC30.53■■■□□ 2.48
CDC42BPAQ5VT25 NAPSB-206ENST00000562112 1266 ntBASIC30.53■■■□□ 2.48
CDC42BPAQ5VT25 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC30.53■■■□□ 2.48
CDC42BPAQ5VT25 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
CDC42BPAQ5VT25 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
CDC42BPAQ5VT25 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
CDC42BPAQ5VT25 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC30.52■■■□□ 2.48
CDC42BPAQ5VT25 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
CDC42BPAQ5VT25 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
CDC42BPAQ5VT25 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
CDC42BPAQ5VT25 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC30.52■■■□□ 2.48
CDC42BPAQ5VT25 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
CDC42BPAQ5VT25 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC30.52■■■□□ 2.48
CDC42BPAQ5VT25 PRR31-201ENST00000371629 978 ntTSL 2 BASIC30.52■■■□□ 2.48
CDC42BPAQ5VT25 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC30.52■■■□□ 2.48
CDC42BPAQ5VT25 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC30.52■■■□□ 2.48
CDC42BPAQ5VT25 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC30.52■■■□□ 2.48
CDC42BPAQ5VT25 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC30.52■■■□□ 2.48
CDC42BPAQ5VT25 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC30.52■■■□□ 2.48
CDC42BPAQ5VT25 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC30.51■■■□□ 2.48
CDC42BPAQ5VT25 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC30.51■■■□□ 2.48
CDC42BPAQ5VT25 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC30.51■■■□□ 2.48
CDC42BPAQ5VT25 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC30.51■■■□□ 2.47
CDC42BPAQ5VT25 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC30.51■■■□□ 2.47
CDC42BPAQ5VT25 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
CDC42BPAQ5VT25 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC30.51■■■□□ 2.47
CDC42BPAQ5VT25 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
CDC42BPAQ5VT25 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC30.51■■■□□ 2.47
CDC42BPAQ5VT25 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC30.51■■■□□ 2.47
CDC42BPAQ5VT25 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC30.51■■■□□ 2.47
CDC42BPAQ5VT25 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
CDC42BPAQ5VT25 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
CDC42BPAQ5VT25 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
CDC42BPAQ5VT25 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
CDC42BPAQ5VT25 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC30.5■■■□□ 2.47
CDC42BPAQ5VT25 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC30.5■■■□□ 2.47
CDC42BPAQ5VT25 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC30.5■■■□□ 2.47
CDC42BPAQ5VT25 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
CDC42BPAQ5VT25 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC30.5■■■□□ 2.47
CDC42BPAQ5VT25 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
CDC42BPAQ5VT25 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
CDC42BPAQ5VT25 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
CDC42BPAQ5VT25 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
CDC42BPAQ5VT25 PPP1R14BP5-201ENST00000440334 435 ntBASIC30.49■■■□□ 2.47
CDC42BPAQ5VT25 C2orf69P3-201ENST00000565542 1120 ntBASIC30.49■■■□□ 2.47
CDC42BPAQ5VT25 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC30.49■■■□□ 2.47
CDC42BPAQ5VT25 AL031985.4-201ENST00000642138 673 ntBASIC30.49■■■□□ 2.47
CDC42BPAQ5VT25 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC30.49■■■□□ 2.47
CDC42BPAQ5VT25 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
CDC42BPAQ5VT25 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC30.48■■■□□ 2.47
CDC42BPAQ5VT25 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC30.48■■■□□ 2.47
CDC42BPAQ5VT25 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
CDC42BPAQ5VT25 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC30.48■■■□□ 2.47
CDC42BPAQ5VT25 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC30.48■■■□□ 2.47
CDC42BPAQ5VT25 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
CDC42BPAQ5VT25 HLA-G-202ENST00000376815 851 ntBASIC30.48■■■□□ 2.47
CDC42BPAQ5VT25 HLA-G-203ENST00000376818 1127 ntBASIC30.48■■■□□ 2.47
CDC42BPAQ5VT25 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC30.48■■■□□ 2.47
CDC42BPAQ5VT25 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
CDC42BPAQ5VT25 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC30.48■■■□□ 2.47
CDC42BPAQ5VT25 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
CDC42BPAQ5VT25 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC30.48■■■□□ 2.47
CDC42BPAQ5VT25 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC30.48■■■□□ 2.47
CDC42BPAQ5VT25 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC30.48■■■□□ 2.47
CDC42BPAQ5VT25 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC30.48■■■□□ 2.47
CDC42BPAQ5VT25 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
CDC42BPAQ5VT25 B3GAT3P1-201ENST00000471720 806 ntBASIC30.47■■■□□ 2.47
CDC42BPAQ5VT25 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC30.47■■■□□ 2.47
CDC42BPAQ5VT25 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC30.47■■■□□ 2.47
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms