Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
ATPAF1Q5TC12 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ATPAF1Q5TC12 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC17.33■□□□□ 0.36
ATPAF1Q5TC12 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC17.33■□□□□ 0.36
ATPAF1Q5TC12 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ATPAF1Q5TC12 AC007322.4-201ENST00000509611 723 ntBASIC17.33■□□□□ 0.36
ATPAF1Q5TC12 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC17.33■□□□□ 0.36
ATPAF1Q5TC12 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC17.33■□□□□ 0.36
ATPAF1Q5TC12 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
ATPAF1Q5TC12 AC092666.2-201ENST00000613287 246 ntBASIC17.33■□□□□ 0.36
ATPAF1Q5TC12 AC013268.1-206ENST00000638368 961 ntBASIC17.33■□□□□ 0.36
ATPAF1Q5TC12 AC112229.1-201ENST00000639295 961 ntBASIC17.33■□□□□ 0.36
ATPAF1Q5TC12 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.33■□□□□ 0.36
ATPAF1Q5TC12 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATPAF1Q5TC12 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATPAF1Q5TC12 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.33■□□□□ 0.36
ATPAF1Q5TC12 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
ATPAF1Q5TC12 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATPAF1Q5TC12 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ATPAF1Q5TC12 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ATPAF1Q5TC12 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.33■□□□□ 0.36
ATPAF1Q5TC12 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATPAF1Q5TC12 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATPAF1Q5TC12 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATPAF1Q5TC12 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATPAF1Q5TC12 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATPAF1Q5TC12 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATPAF1Q5TC12 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATPAF1Q5TC12 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
ATPAF1Q5TC12 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATPAF1Q5TC12 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.32■□□□□ 0.36
ATPAF1Q5TC12 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATPAF1Q5TC12 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
ATPAF1Q5TC12 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATPAF1Q5TC12 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATPAF1Q5TC12 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
ATPAF1Q5TC12 AC091799.1-201ENST00000422823 811 ntBASIC17.32■□□□□ 0.36
ATPAF1Q5TC12 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC17.32■□□□□ 0.36
ATPAF1Q5TC12 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC17.32■□□□□ 0.36
ATPAF1Q5TC12 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ATPAF1Q5TC12 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ATPAF1Q5TC12 AL162412.1-201ENST00000567129 965 ntBASIC17.32■□□□□ 0.36
ATPAF1Q5TC12 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC17.32■□□□□ 0.36
ATPAF1Q5TC12 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
ATPAF1Q5TC12 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
ATPAF1Q5TC12 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ATPAF1Q5TC12 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATPAF1Q5TC12 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.32■□□□□ 0.36
ATPAF1Q5TC12 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ATPAF1Q5TC12 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATPAF1Q5TC12 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATPAF1Q5TC12 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.32■□□□□ 0.36
ATPAF1Q5TC12 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ATPAF1Q5TC12 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
ATPAF1Q5TC12 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATPAF1Q5TC12 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.31■□□□□ 0.36
ATPAF1Q5TC12 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.31■□□□□ 0.36
ATPAF1Q5TC12 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
ATPAF1Q5TC12 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATPAF1Q5TC12 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATPAF1Q5TC12 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATPAF1Q5TC12 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
ATPAF1Q5TC12 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATPAF1Q5TC12 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATPAF1Q5TC12 AC004911.1-201ENST00000416316 871 ntBASIC17.31■□□□□ 0.36
ATPAF1Q5TC12 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC17.31■□□□□ 0.36
ATPAF1Q5TC12 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.31■□□□□ 0.36
ATPAF1Q5TC12 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ATPAF1Q5TC12 AC231657.2-201ENST00000624556 255 ntBASIC17.31■□□□□ 0.36
ATPAF1Q5TC12 PARP1-210ENST00000629232 477 ntTSL 5 BASIC17.31■□□□□ 0.36
ATPAF1Q5TC12 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATPAF1Q5TC12 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.31■□□□□ 0.36
ATPAF1Q5TC12 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
ATPAF1Q5TC12 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
ATPAF1Q5TC12 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATPAF1Q5TC12 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ATPAF1Q5TC12 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ATPAF1Q5TC12 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
ATPAF1Q5TC12 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATPAF1Q5TC12 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATPAF1Q5TC12 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATPAF1Q5TC12 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATPAF1Q5TC12 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.3■□□□□ 0.36
ATPAF1Q5TC12 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
ATPAF1Q5TC12 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ATPAF1Q5TC12 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ATPAF1Q5TC12 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.3■□□□□ 0.36
ATPAF1Q5TC12 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATPAF1Q5TC12 UQCRFS1P1-201ENST00000435169 820 ntBASIC17.3■□□□□ 0.36
ATPAF1Q5TC12 VPS53-216ENST00000574029 585 ntTSL 4 BASIC17.3■□□□□ 0.36
ATPAF1Q5TC12 AC080038.1-201ENST00000611274 1154 ntBASIC17.3■□□□□ 0.36
ATPAF1Q5TC12 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
ATPAF1Q5TC12 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.3■□□□□ 0.36
ATPAF1Q5TC12 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
ATPAF1Q5TC12 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATPAF1Q5TC12 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
ATPAF1Q5TC12 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATPAF1Q5TC12 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
ATPAF1Q5TC12 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ATPAF1Q5TC12 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms