Protein–RNA interactions for Protein: Q5T1V6

DDX59, Probable ATP-dependent RNA helicase DDX59, humanhuman

Known RBP eCLIP

Length 619 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX59Q5T1V6 PCBP2-210ENST00000547859 1919 ntTSL 210.71□□□□□ -0.697e-17■□□□□ 10.1
DDX59Q5T1V6 PCBP2-211ENST00000547987 681 ntTSL 38.14□□□□□ -1.117e-17■□□□□ 10.1
DDX59Q5T1V6 SREBF1-211ENST00000476994 591 ntTSL 216.31■□□□□ 0.23e-10■□□□□ 10
DDX59Q5T1V6 PCBP2-218ENST00000550585 2543 ntTSL 59.13□□□□□ -0.955e-17■□□□□ 10
DDX59Q5T1V6 RAB11FIP3-208ENST00000464263 329 ntTSL 314□□□□□ -0.171e-6■□□□□ 10
DDX59Q5T1V6 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.59■□□□□ 0.092e-13■□□□□ 10
DDX59Q5T1V6 SLC35C2-207ENST00000480329 919 ntTSL 217.2■□□□□ 0.343e-6■□□□□ 10
DDX59Q5T1V6 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.04■□□□□ -03e-6■□□□□ 10
DDX59Q5T1V6 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.033e-6■□□□□ 10
DDX59Q5T1V6 SLC35C2-211ENST00000487729 803 ntTSL 514.85□□□□□ -0.033e-6■□□□□ 10
DDX59Q5T1V6 SLC35C2-205ENST00000420518 588 ntTSL 314.44□□□□□ -0.13e-6■□□□□ 10
DDX59Q5T1V6 SLC35C2-208ENST00000481809 872 ntTSL 514.23□□□□□ -0.133e-6■□□□□ 10
DDX59Q5T1V6 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.153e-6■□□□□ 10
DDX59Q5T1V6 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.98□□□□□ -0.173e-6■□□□□ 10
DDX59Q5T1V6 SLC35C2-210ENST00000484318 971 ntTSL 513.86□□□□□ -0.193e-6■□□□□ 10
DDX59Q5T1V6 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.223e-6■□□□□ 10
DDX59Q5T1V6 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.46■■□□□ 1.037e-7■□□□□ 10
DDX59Q5T1V6 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.2■□□□□ 0.827e-7■□□□□ 10
DDX59Q5T1V6 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC5.94□□□□□ -1.467e-7■□□□□ 10
DDX59Q5T1V6 ZYX-206ENST00000449630 533 ntTSL 416.58■□□□□ 0.246e-11■□□□□ 10
DDX59Q5T1V6 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.383e-7■□□□□ 10
DDX59Q5T1V6 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.24e-9■□□□□ 10
DDX59Q5T1V6 PCBP2-212ENST00000548190 581 ntTSL 510.3□□□□□ -0.764e-21■□□□□ 9.9
DDX59Q5T1V6 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.62e-8■□□□□ 9.9
DDX59Q5T1V6 SPRED2-201ENST00000356388 4097 ntTSL 1 (best) BASIC12.35□□□□□ -0.438e-21■□□□□ 9.9
DDX59Q5T1V6 FASN-207ENST00000635197 627 ntTSL 314.18□□□□□ -0.142e-13■□□□□ 9.9
DDX59Q5T1V6 MAPK1IP1L-203ENST00000554364 565 ntTSL 28.08□□□□□ -1.126e-8■□□□□ 9.9
DDX59Q5T1V6 ATXN2L-219ENST00000566007 471 ntTSL 38.07□□□□□ -1.122e-15■□□□□ 9.9
DDX59Q5T1V6 MTSS1L-203ENST00000576338 518 ntTSL 316.15■□□□□ 0.186e-7■□□□□ 9.8
DDX59Q5T1V6 SORBS3-211ENST00000521554 858 ntTSL 214.01□□□□□ -0.174e-12■□□□□ 9.8
DDX59Q5T1V6 SORBS3-216ENST00000523348 680 ntTSL 211.74□□□□□ -0.534e-12■□□□□ 9.8
DDX59Q5T1V6 COL27A1-202ENST00000451716 2865 ntTSL 1 (best)11.59□□□□□ -0.553e-7■□□□□ 9.8
DDX59Q5T1V6 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.86■□□□□ 0.935e-10■□□□□ 9.8
DDX59Q5T1V6 RBMS1-211ENST00000477486 562 ntTSL 419.66■□□□□ 0.749e-6■□□□□ 9.8
DDX59Q5T1V6 C6orf136-204ENST00000446773 1496 ntTSL 1 (best)18.23■□□□□ 0.515e-10■□□□□ 9.8
DDX59Q5T1V6 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.493e-7■□□□□ 9.8
DDX59Q5T1V6 AUP1-207ENST00000472800 663 ntTSL 418.04■□□□□ 0.483e-7■□□□□ 9.8
DDX59Q5T1V6 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.313e-7■□□□□ 9.8
DDX59Q5T1V6 AUP1-204ENST00000463900 1645 ntTSL 1 (best)15.96■□□□□ 0.153e-7■□□□□ 9.8
DDX59Q5T1V6 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.145e-10■□□□□ 9.8
DDX59Q5T1V6 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.87■□□□□ 0.139e-6■□□□□ 9.8
DDX59Q5T1V6 AUP1-202ENST00000425118 1581 ntTSL 1 (best)15.54■□□□□ 0.083e-7■□□□□ 9.8
DDX59Q5T1V6 RBMS1-214ENST00000491781 1533 ntTSL 1 (best)15.31■□□□□ 0.049e-6■□□□□ 9.8
DDX59Q5T1V6 AUP1-206ENST00000466894 1658 ntTSL 515.06■□□□□ 03e-7■□□□□ 9.8
DDX59Q5T1V6 C6orf136-206ENST00000463794 445 ntTSL 314.94□□□□□ -0.025e-10■□□□□ 9.8
DDX59Q5T1V6 C6orf136-210ENST00000484551 613 ntTSL 314.66□□□□□ -0.065e-10■□□□□ 9.8
DDX59Q5T1V6 C6orf136-213ENST00000493705 715 ntTSL 514.53□□□□□ -0.085e-10■□□□□ 9.8
DDX59Q5T1V6 C6orf136-212ENST00000488383 1337 ntTSL 514.21□□□□□ -0.135e-10■□□□□ 9.8
DDX59Q5T1V6 GET4-205ENST00000441491 682 ntTSL 513.68□□□□□ -0.229e-6■□□□□ 9.8
DDX59Q5T1V6 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.229e-6■□□□□ 9.8
DDX59Q5T1V6 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC12.77□□□□□ -0.375e-10■□□□□ 9.8
DDX59Q5T1V6 RBMS1-201ENST00000348849 4273 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.379e-6■□□□□ 9.8
DDX59Q5T1V6 C6orf136-211ENST00000487873 464 ntTSL 312.73□□□□□ -0.375e-10■□□□□ 9.8
DDX59Q5T1V6 GCKR-205ENST00000472290 1302 ntTSL 1 (best)12.11□□□□□ -0.479e-6■□□□□ 9.8
DDX59Q5T1V6 SRP54-AS1-202ENST00000555015 561 ntTSL 311.76□□□□□ -0.539e-6■□□□□ 9.8
DDX59Q5T1V6 RBMS1-209ENST00000474820 4016 ntTSL 1 (best)4.56□□□□□ -1.689e-6■□□□□ 9.8
DDX59Q5T1V6 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.17□□□□□ -1.749e-6■□□□□ 9.8
DDX59Q5T1V6 SPRED2-205ENST00000440972 555 ntTSL 311.68□□□□□ -0.544e-9■□□□□ 9.8
DDX59Q5T1V6 COL27A1-207ENST00000494090 5329 ntTSL 1 (best)18.78■□□□□ 0.64e-7■□□□□ 9.7
DDX59Q5T1V6 SEMA4G-212ENST00000613292 1171 ntTSL 1 (best) BASIC10.01□□□□□ -0.812e-33■□□□□ 9.7
DDX59Q5T1V6 PBX2-203ENST00000480254 580 ntTSL 210.07□□□□□ -0.84e-9■□□□□ 9.7
DDX59Q5T1V6 IRF2-201ENST00000393593 2303 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91e-8■□□□□ 9.7
DDX59Q5T1V6 PLXNB1-209ENST00000466353 626 ntTSL 316.84■□□□□ 0.297e-7■□□□□ 9.7
DDX59Q5T1V6 TMC6-209ENST00000588087 2384 ntTSL 220.79■□□□□ 0.922e-8■□□□□ 9.7
DDX59Q5T1V6 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.21■□□□□ 0.832e-8■□□□□ 9.7
DDX59Q5T1V6 TMC6-206ENST00000586271 970 ntTSL 217.62■□□□□ 0.412e-8■□□□□ 9.7
DDX59Q5T1V6 HNF1A-AS1-201ENST00000433033 612 ntTSL 3 BASIC11.87□□□□□ -0.511e-14■□□□□ 9.7
DDX59Q5T1V6 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.051e-6■□□□□ 9.7
DDX59Q5T1V6 SLC16A3-218ENST00000583444 2882 nt18.5■□□□□ 0.558e-9■□□□□ 9.6
DDX59Q5T1V6 PLXNB1-206ENST00000462738 663 ntTSL 218.18■□□□□ 0.52e-7■□□□□ 9.6
DDX59Q5T1V6 AHCY-206ENST00000606061 1170 ntTSL 218.09■□□□□ 0.491e-7■□□□□ 9.6
DDX59Q5T1V6 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.421e-7■□□□□ 9.6
DDX59Q5T1V6 AL645608.8-201ENST00000606034 2086 ntBASIC16.98■□□□□ 0.311e-7■□□□□ 9.6
DDX59Q5T1V6 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.74■□□□□ 0.271e-7■□□□□ 9.6
DDX59Q5T1V6 PLXNB1-217ENST00000484485 560 ntTSL 416.36■□□□□ 0.212e-7■□□□□ 9.6
DDX59Q5T1V6 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.68■□□□□ 0.11e-7■□□□□ 9.6
DDX59Q5T1V6 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.061e-7■□□□□ 9.6
DDX59Q5T1V6 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.041e-7■□□□□ 9.6
DDX59Q5T1V6 AHCY-204ENST00000480653 2211 ntTSL 214.95□□□□□ -0.021e-7■□□□□ 9.6
DDX59Q5T1V6 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.51□□□□□ -0.091e-7■□□□□ 9.6
DDX59Q5T1V6 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.171e-7■□□□□ 9.6
DDX59Q5T1V6 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.261e-7■□□□□ 9.6
DDX59Q5T1V6 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC13.39□□□□□ -0.271e-7■□□□□ 9.6
DDX59Q5T1V6 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC13.08□□□□□ -0.321e-7■□□□□ 9.6
DDX59Q5T1V6 CDIP1-203ENST00000562579 577 ntTSL 513.04□□□□□ -0.321e-7■□□□□ 9.6
DDX59Q5T1V6 AHCY-202ENST00000468908 675 ntTSL 512.62□□□□□ -0.391e-7■□□□□ 9.6
DDX59Q5T1V6 RTEL1-206ENST00000425905 664 ntTSL 212.08□□□□□ -0.481e-7■□□□□ 9.6
DDX59Q5T1V6 AGPAT3-208ENST00000448287 454 ntTSL 311.5□□□□□ -0.571e-7■□□□□ 9.6
DDX59Q5T1V6 CDIP1-213ENST00000589159 838 ntTSL 511.4□□□□□ -0.581e-7■□□□□ 9.6
DDX59Q5T1V6 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.323e-27■□□□□ 9.6
DDX59Q5T1V6 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.083e-27■□□□□ 9.6
DDX59Q5T1V6 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.043e-27■□□□□ 9.6
DDX59Q5T1V6 LENG8-203ENST00000421200 594 ntTSL 313.74□□□□□ -0.213e-27■□□□□ 9.6
DDX59Q5T1V6 LENG8-201ENST00000326764 3991 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.383e-27■□□□□ 9.6
DDX59Q5T1V6 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.77□□□□□ -1.811e-323■□□□□ 9.6
DDX59Q5T1V6 ADNP-203ENST00000396029 6261 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.426e-9■□□□□ 9.6
DDX59Q5T1V6 ADNP-206ENST00000621696 6224 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.896e-9■□□□□ 9.6
DDX59Q5T1V6 ADNP-204ENST00000396032 4581 ntAPPRIS P1 TSL 2 BASIC9.16□□□□□ -0.946e-9■□□□□ 9.6
DDX59Q5T1V6 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.081e-85■□□□□ 9.6
DDX59Q5T1V6 ATXN2L-213ENST00000564162 770 ntTSL 515.38■□□□□ 0.052e-15■□□□□ 9.6
Retrieved 100 of 7,289 protein–RNA pairs in 189.5 ms