Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.53■□□□□ 0.4
LRRK2Q5S007 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
LRRK2Q5S007 AL671883.3-201ENST00000603274 991 ntBASIC17.53■□□□□ 0.4
LRRK2Q5S007 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRK2Q5S007 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRK2Q5S007 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRK2Q5S007 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC17.53■□□□□ 0.4
LRRK2Q5S007 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRK2Q5S007 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRK2Q5S007 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRK2Q5S007 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRRK2Q5S007 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC17.52■□□□□ 0.4
LRRK2Q5S007 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
LRRK2Q5S007 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.52■□□□□ 0.4
LRRK2Q5S007 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.52■□□□□ 0.4
LRRK2Q5S007 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.52■□□□□ 0.4
LRRK2Q5S007 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.52■□□□□ 0.4
LRRK2Q5S007 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRRK2Q5S007 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRRK2Q5S007 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.52■□□□□ 0.4
LRRK2Q5S007 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.4
LRRK2Q5S007 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.52■□□□□ 0.4
LRRK2Q5S007 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
LRRK2Q5S007 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.52■□□□□ 0.39
LRRK2Q5S007 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LRRK2Q5S007 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.52■□□□□ 0.39
LRRK2Q5S007 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.52■□□□□ 0.39
LRRK2Q5S007 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.52■□□□□ 0.39
LRRK2Q5S007 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.52■□□□□ 0.39
LRRK2Q5S007 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
LRRK2Q5S007 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
LRRK2Q5S007 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
LRRK2Q5S007 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC17.52■□□□□ 0.39
LRRK2Q5S007 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRRK2Q5S007 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.51■□□□□ 0.39
LRRK2Q5S007 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.51■□□□□ 0.39
LRRK2Q5S007 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.51■□□□□ 0.39
LRRK2Q5S007 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC17.51■□□□□ 0.39
LRRK2Q5S007 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
LRRK2Q5S007 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.51■□□□□ 0.39
LRRK2Q5S007 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
LRRK2Q5S007 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRRK2Q5S007 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
LRRK2Q5S007 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LRRK2Q5S007 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.51■□□□□ 0.39
LRRK2Q5S007 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRRK2Q5S007 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.51■□□□□ 0.39
LRRK2Q5S007 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.51■□□□□ 0.39
LRRK2Q5S007 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.51■□□□□ 0.39
LRRK2Q5S007 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LRRK2Q5S007 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.51■□□□□ 0.39
LRRK2Q5S007 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.51■□□□□ 0.39
LRRK2Q5S007 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
LRRK2Q5S007 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
LRRK2Q5S007 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRRK2Q5S007 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC17.5■□□□□ 0.39
LRRK2Q5S007 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.5■□□□□ 0.39
LRRK2Q5S007 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
LRRK2Q5S007 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRRK2Q5S007 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.5■□□□□ 0.39
LRRK2Q5S007 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.5■□□□□ 0.39
LRRK2Q5S007 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.5■□□□□ 0.39
LRRK2Q5S007 AL023803.3-201ENST00000615559 522 ntBASIC17.5■□□□□ 0.39
LRRK2Q5S007 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRRK2Q5S007 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRRK2Q5S007 AL022342.1-201ENST00000400363 863 ntBASIC17.5■□□□□ 0.39
LRRK2Q5S007 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
LRRK2Q5S007 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.5■□□□□ 0.39
LRRK2Q5S007 CCR12P-201ENST00000446203 998 ntBASIC17.5■□□□□ 0.39
LRRK2Q5S007 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.5■□□□□ 0.39
LRRK2Q5S007 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.5■□□□□ 0.39
LRRK2Q5S007 VENTXP5-201ENST00000523979 775 ntBASIC17.5■□□□□ 0.39
LRRK2Q5S007 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
LRRK2Q5S007 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.5■□□□□ 0.39
LRRK2Q5S007 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
LRRK2Q5S007 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.5■□□□□ 0.39
LRRK2Q5S007 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRK2Q5S007 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.49■□□□□ 0.39
LRRK2Q5S007 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRK2Q5S007 AC092338.2-201ENST00000568827 1415 ntBASIC17.49■□□□□ 0.39
LRRK2Q5S007 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRK2Q5S007 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRK2Q5S007 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRK2Q5S007 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LRRK2Q5S007 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.49■□□□□ 0.39
LRRK2Q5S007 MIR3652-201ENST00000579335 131 ntBASIC17.49■□□□□ 0.39
LRRK2Q5S007 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRK2Q5S007 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRK2Q5S007 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRK2Q5S007 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC17.49■□□□□ 0.39
LRRK2Q5S007 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
LRRK2Q5S007 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LRRK2Q5S007 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.49■□□□□ 0.39
LRRK2Q5S007 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.49■□□□□ 0.39
LRRK2Q5S007 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
LRRK2Q5S007 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.49■□□□□ 0.39
LRRK2Q5S007 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.49■□□□□ 0.39
LRRK2Q5S007 HYMAI.1-201ENST00000620949 238 ntBASIC17.49■□□□□ 0.39
LRRK2Q5S007 AC012313.10-201ENST00000623509 926 ntBASIC17.49■□□□□ 0.39
LRRK2Q5S007 PKM-204ENST00000449901 2526 ntTSL 2 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms