Protein–RNA interactions for Protein: Q53RY4

KRTCAP3, Keratinocyte-associated protein 3, humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3Q53RY4 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
KRTCAP3Q53RY4 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
KRTCAP3Q53RY4 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC17.98■□□□□ 0.47
KRTCAP3Q53RY4 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
KRTCAP3Q53RY4 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
KRTCAP3Q53RY4 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
KRTCAP3Q53RY4 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
KRTCAP3Q53RY4 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.98■□□□□ 0.47
KRTCAP3Q53RY4 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.98■□□□□ 0.47
KRTCAP3Q53RY4 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.98■□□□□ 0.47
KRTCAP3Q53RY4 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
KRTCAP3Q53RY4 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
KRTCAP3Q53RY4 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
KRTCAP3Q53RY4 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
KRTCAP3Q53RY4 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
KRTCAP3Q53RY4 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
KRTCAP3Q53RY4 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
KRTCAP3Q53RY4 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
KRTCAP3Q53RY4 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
KRTCAP3Q53RY4 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
KRTCAP3Q53RY4 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC17.97■□□□□ 0.47
KRTCAP3Q53RY4 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.97■□□□□ 0.47
KRTCAP3Q53RY4 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.97■□□□□ 0.47
KRTCAP3Q53RY4 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.97■□□□□ 0.47
KRTCAP3Q53RY4 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.97■□□□□ 0.47
KRTCAP3Q53RY4 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.97■□□□□ 0.47
KRTCAP3Q53RY4 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
KRTCAP3Q53RY4 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
KRTCAP3Q53RY4 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
KRTCAP3Q53RY4 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
KRTCAP3Q53RY4 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
KRTCAP3Q53RY4 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
KRTCAP3Q53RY4 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC17.97■□□□□ 0.47
KRTCAP3Q53RY4 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
KRTCAP3Q53RY4 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
KRTCAP3Q53RY4 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
KRTCAP3Q53RY4 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
KRTCAP3Q53RY4 MYB-221ENST00000527615 2381 ntTSL 5 BASIC17.96■□□□□ 0.47
KRTCAP3Q53RY4 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.96■□□□□ 0.47
KRTCAP3Q53RY4 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
KRTCAP3Q53RY4 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC17.96■□□□□ 0.47
KRTCAP3Q53RY4 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
KRTCAP3Q53RY4 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
KRTCAP3Q53RY4 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
KRTCAP3Q53RY4 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
KRTCAP3Q53RY4 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
KRTCAP3Q53RY4 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.96■□□□□ 0.47
KRTCAP3Q53RY4 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.96■□□□□ 0.47
KRTCAP3Q53RY4 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
KRTCAP3Q53RY4 AC010331.1-201ENST00000611423 582 ntBASIC17.96■□□□□ 0.47
KRTCAP3Q53RY4 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.96■□□□□ 0.47
KRTCAP3Q53RY4 PTBP1P-201ENST00000554374 1601 ntBASIC17.96■□□□□ 0.47
KRTCAP3Q53RY4 AL024507.2-201ENST00000606070 2574 ntBASIC17.96■□□□□ 0.47
KRTCAP3Q53RY4 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC17.96■□□□□ 0.47
KRTCAP3Q53RY4 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
KRTCAP3Q53RY4 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
KRTCAP3Q53RY4 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
KRTCAP3Q53RY4 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC17.95■□□□□ 0.46
KRTCAP3Q53RY4 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
KRTCAP3Q53RY4 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
KRTCAP3Q53RY4 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
KRTCAP3Q53RY4 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
KRTCAP3Q53RY4 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
KRTCAP3Q53RY4 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.95■□□□□ 0.46
KRTCAP3Q53RY4 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.95■□□□□ 0.46
KRTCAP3Q53RY4 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
KRTCAP3Q53RY4 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.95■□□□□ 0.46
KRTCAP3Q53RY4 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
KRTCAP3Q53RY4 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
KRTCAP3Q53RY4 KRT8P17-201ENST00000453110 1448 ntBASIC17.95■□□□□ 0.46
KRTCAP3Q53RY4 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
KRTCAP3Q53RY4 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.95■□□□□ 0.46
KRTCAP3Q53RY4 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC17.95■□□□□ 0.46
KRTCAP3Q53RY4 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
KRTCAP3Q53RY4 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KRTCAP3Q53RY4 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KRTCAP3Q53RY4 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
KRTCAP3Q53RY4 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KRTCAP3Q53RY4 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
KRTCAP3Q53RY4 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KRTCAP3Q53RY4 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KRTCAP3Q53RY4 NUDT16P1-203ENST00000513809 620 ntBASIC17.94■□□□□ 0.46
KRTCAP3Q53RY4 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.94■□□□□ 0.46
KRTCAP3Q53RY4 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
KRTCAP3Q53RY4 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.94■□□□□ 0.46
KRTCAP3Q53RY4 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.94■□□□□ 0.46
KRTCAP3Q53RY4 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.94■□□□□ 0.46
KRTCAP3Q53RY4 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.94■□□□□ 0.46
KRTCAP3Q53RY4 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.94■□□□□ 0.46
KRTCAP3Q53RY4 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KRTCAP3Q53RY4 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KRTCAP3Q53RY4 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.94■□□□□ 0.46
KRTCAP3Q53RY4 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.94■□□□□ 0.46
KRTCAP3Q53RY4 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.94■□□□□ 0.46
KRTCAP3Q53RY4 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KRTCAP3Q53RY4 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KRTCAP3Q53RY4 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
KRTCAP3Q53RY4 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC17.93■□□□□ 0.46
KRTCAP3Q53RY4 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KRTCAP3Q53RY4 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms