Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC01554Q52M75 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC01554Q52M75 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
LINC01554Q52M75 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
LINC01554Q52M75 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC10.05□□□□□ -0.8
LINC01554Q52M75 AC084018.2-201ENST00000613093 2607 ntBASIC10.04□□□□□ -0.8
LINC01554Q52M75 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
LINC01554Q52M75 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC10.04□□□□□ -0.8
LINC01554Q52M75 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC10.04□□□□□ -0.8
LINC01554Q52M75 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC01554Q52M75 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC01554Q52M75 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC10.04□□□□□ -0.8
LINC01554Q52M75 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC10.04□□□□□ -0.8
LINC01554Q52M75 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC10.04□□□□□ -0.8
LINC01554Q52M75 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC01554Q52M75 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC01554Q52M75 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
LINC01554Q52M75 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
LINC01554Q52M75 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
LINC01554Q52M75 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC01554Q52M75 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC01554Q52M75 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC01554Q52M75 AL353803.4-201ENST00000565882 1934 ntBASIC10.04□□□□□ -0.8
LINC01554Q52M75 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
LINC01554Q52M75 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC01554Q52M75 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC01554Q52M75 RARRES2P2-201ENST00000394842 485 ntBASIC10.04□□□□□ -0.8
LINC01554Q52M75 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC10.04□□□□□ -0.8
LINC01554Q52M75 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC01554Q52M75 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC10.04□□□□□ -0.8
LINC01554Q52M75 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC01554Q52M75 U85056.1-201ENST00000616429 682 ntBASIC10.04□□□□□ -0.8
LINC01554Q52M75 AC129492.7-201ENST00000622992 756 ntBASIC10.04□□□□□ -0.8
LINC01554Q52M75 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
LINC01554Q52M75 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC01554Q52M75 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC10.04□□□□□ -0.8
LINC01554Q52M75 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC01554Q52M75 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC01554Q52M75 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC01554Q52M75 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC10.04□□□□□ -0.8
LINC01554Q52M75 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC01554Q52M75 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
LINC01554Q52M75 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC01554Q52M75 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
LINC01554Q52M75 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC01554Q52M75 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC10.04□□□□□ -0.8
LINC01554Q52M75 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC10.04□□□□□ -0.8
LINC01554Q52M75 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
LINC01554Q52M75 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
LINC01554Q52M75 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC01554Q52M75 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
LINC01554Q52M75 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
LINC01554Q52M75 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC01554Q52M75 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC10.04□□□□□ -0.8
LINC01554Q52M75 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC01554Q52M75 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC01554Q52M75 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC10.04□□□□□ -0.8
LINC01554Q52M75 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC01554Q52M75 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC01554Q52M75 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
LINC01554Q52M75 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
LINC01554Q52M75 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
LINC01554Q52M75 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC01554Q52M75 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC01554Q52M75 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
LINC01554Q52M75 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
LINC01554Q52M75 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC01554Q52M75 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC01554Q52M75 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC10.03□□□□□ -0.8
LINC01554Q52M75 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC01554Q52M75 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC01554Q52M75 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC01554Q52M75 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC10.03□□□□□ -0.8
LINC01554Q52M75 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC01554Q52M75 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC10.03□□□□□ -0.8
LINC01554Q52M75 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC01554Q52M75 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
LINC01554Q52M75 THA1P-201ENST00000590384 1145 ntBASIC10.03□□□□□ -0.8
LINC01554Q52M75 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
LINC01554Q52M75 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC01554Q52M75 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC01554Q52M75 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC10.03□□□□□ -0.8
LINC01554Q52M75 AL662844.4-201ENST00000606367 2838 ntBASIC10.03□□□□□ -0.8
LINC01554Q52M75 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
LINC01554Q52M75 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC01554Q52M75 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC01554Q52M75 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC01554Q52M75 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC10.03□□□□□ -0.8
LINC01554Q52M75 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC01554Q52M75 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC01554Q52M75 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC01554Q52M75 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC01554Q52M75 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC01554Q52M75 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC01554Q52M75 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC10.03□□□□□ -0.8
LINC01554Q52M75 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC10.03□□□□□ -0.8
LINC01554Q52M75 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC01554Q52M75 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC10.03□□□□□ -0.8
LINC01554Q52M75 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
LINC01554Q52M75 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms