Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
CTC1Q2NKJ3 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CTC1Q2NKJ3 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.47■■□□□ 1.03
CTC1Q2NKJ3 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.47■■□□□ 1.03
CTC1Q2NKJ3 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CTC1Q2NKJ3 AC005521.1-201ENST00000393351 872 ntBASIC21.47■■□□□ 1.03
CTC1Q2NKJ3 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CTC1Q2NKJ3 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC21.47■■□□□ 1.03
CTC1Q2NKJ3 NME3-204ENST00000563498 920 ntTSL 2 BASIC21.47■■□□□ 1.03
CTC1Q2NKJ3 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC21.47■■□□□ 1.03
CTC1Q2NKJ3 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.47■■□□□ 1.03
CTC1Q2NKJ3 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.47■■□□□ 1.03
CTC1Q2NKJ3 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CTC1Q2NKJ3 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CTC1Q2NKJ3 HTR7P1-201ENST00000538670 1336 ntBASIC21.47■■□□□ 1.03
CTC1Q2NKJ3 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.47■■□□□ 1.03
CTC1Q2NKJ3 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CTC1Q2NKJ3 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
CTC1Q2NKJ3 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
CTC1Q2NKJ3 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
CTC1Q2NKJ3 AC092667.1-201ENST00000434301 2586 ntBASIC21.46■■□□□ 1.03
CTC1Q2NKJ3 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.46■■□□□ 1.03
CTC1Q2NKJ3 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CTC1Q2NKJ3 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CTC1Q2NKJ3 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CTC1Q2NKJ3 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CTC1Q2NKJ3 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CTC1Q2NKJ3 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CTC1Q2NKJ3 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.46■■□□□ 1.03
CTC1Q2NKJ3 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.46■■□□□ 1.03
CTC1Q2NKJ3 PGM5P4-201ENST00000421970 445 ntBASIC21.46■■□□□ 1.03
CTC1Q2NKJ3 AL353807.1-201ENST00000427475 662 ntBASIC21.46■■□□□ 1.03
CTC1Q2NKJ3 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC21.46■■□□□ 1.03
CTC1Q2NKJ3 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CTC1Q2NKJ3 KRT16P5-201ENST00000455284 522 ntBASIC21.46■■□□□ 1.03
CTC1Q2NKJ3 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC21.46■■□□□ 1.03
CTC1Q2NKJ3 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.46■■□□□ 1.03
CTC1Q2NKJ3 SRI-203ENST00000419179 1307 ntTSL 2 BASIC21.46■■□□□ 1.03
CTC1Q2NKJ3 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CTC1Q2NKJ3 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
CTC1Q2NKJ3 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CTC1Q2NKJ3 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CTC1Q2NKJ3 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CTC1Q2NKJ3 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CTC1Q2NKJ3 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CTC1Q2NKJ3 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.45■■□□□ 1.02
CTC1Q2NKJ3 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CTC1Q2NKJ3 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
CTC1Q2NKJ3 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CTC1Q2NKJ3 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.45■■□□□ 1.02
CTC1Q2NKJ3 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CTC1Q2NKJ3 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC21.45■■□□□ 1.02
CTC1Q2NKJ3 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
CTC1Q2NKJ3 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
CTC1Q2NKJ3 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CTC1Q2NKJ3 RNF146-204ENST00000476956 884 ntTSL 2 BASIC21.45■■□□□ 1.02
CTC1Q2NKJ3 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
CTC1Q2NKJ3 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
CTC1Q2NKJ3 Six3os1_6.1-201ENST00000620790 196 ntBASIC21.45■■□□□ 1.02
CTC1Q2NKJ3 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CTC1Q2NKJ3 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CTC1Q2NKJ3 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CTC1Q2NKJ3 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CTC1Q2NKJ3 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CTC1Q2NKJ3 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CTC1Q2NKJ3 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CTC1Q2NKJ3 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CTC1Q2NKJ3 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.44■■□□□ 1.02
CTC1Q2NKJ3 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
CTC1Q2NKJ3 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CTC1Q2NKJ3 FAM197Y1-201ENST00000421178 764 ntBASIC21.44■■□□□ 1.02
CTC1Q2NKJ3 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.44■■□□□ 1.02
CTC1Q2NKJ3 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC21.44■■□□□ 1.02
CTC1Q2NKJ3 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CTC1Q2NKJ3 KRT8P9-201ENST00000558927 1449 ntBASIC21.44■■□□□ 1.02
CTC1Q2NKJ3 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.43■■□□□ 1.02
CTC1Q2NKJ3 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.43■■□□□ 1.02
CTC1Q2NKJ3 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CTC1Q2NKJ3 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CTC1Q2NKJ3 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CTC1Q2NKJ3 RBM17P1-201ENST00000453646 1190 ntBASIC21.43■■□□□ 1.02
CTC1Q2NKJ3 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC21.43■■□□□ 1.02
CTC1Q2NKJ3 AL121829.2-201ENST00000620908 328 ntBASIC21.43■■□□□ 1.02
CTC1Q2NKJ3 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.43■■□□□ 1.02
CTC1Q2NKJ3 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CTC1Q2NKJ3 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CTC1Q2NKJ3 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.43■■□□□ 1.02
CTC1Q2NKJ3 AC079598.2-202ENST00000546624 1451 ntBASIC21.43■■□□□ 1.02
CTC1Q2NKJ3 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
CTC1Q2NKJ3 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
CTC1Q2NKJ3 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CTC1Q2NKJ3 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.43■■□□□ 1.02
CTC1Q2NKJ3 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.43■■□□□ 1.02
CTC1Q2NKJ3 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CTC1Q2NKJ3 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CTC1Q2NKJ3 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CTC1Q2NKJ3 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CTC1Q2NKJ3 AC113347.1-201ENST00000413321 391 ntBASIC21.42■■□□□ 1.02
CTC1Q2NKJ3 AL157384.1-201ENST00000445995 2473 ntBASIC21.42■■□□□ 1.02
CTC1Q2NKJ3 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms