Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.1■□□□□ 0.33
EFNB3Q15768 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
EFNB3Q15768 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
EFNB3Q15768 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
EFNB3Q15768 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC17.1■□□□□ 0.33
EFNB3Q15768 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
EFNB3Q15768 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC17.1■□□□□ 0.33
EFNB3Q15768 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.1■□□□□ 0.33
EFNB3Q15768 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
EFNB3Q15768 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
EFNB3Q15768 MIR718-201ENST00000390190 70 ntBASIC17.1■□□□□ 0.33
EFNB3Q15768 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
EFNB3Q15768 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.1■□□□□ 0.33
EFNB3Q15768 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
EFNB3Q15768 RPS2P4-201ENST00000476944 856 ntBASIC17.1■□□□□ 0.33
EFNB3Q15768 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.1■□□□□ 0.33
EFNB3Q15768 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
EFNB3Q15768 AL023875.1-201ENST00000640777 796 ntBASIC17.1■□□□□ 0.33
EFNB3Q15768 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
EFNB3Q15768 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
EFNB3Q15768 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
EFNB3Q15768 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
EFNB3Q15768 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
EFNB3Q15768 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
EFNB3Q15768 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
EFNB3Q15768 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC17.1■□□□□ 0.33
EFNB3Q15768 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
EFNB3Q15768 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
EFNB3Q15768 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
EFNB3Q15768 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.09■□□□□ 0.33
EFNB3Q15768 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.09■□□□□ 0.33
EFNB3Q15768 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EFNB3Q15768 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.09■□□□□ 0.33
EFNB3Q15768 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
EFNB3Q15768 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EFNB3Q15768 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EFNB3Q15768 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
EFNB3Q15768 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
EFNB3Q15768 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EFNB3Q15768 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EFNB3Q15768 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EFNB3Q15768 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
EFNB3Q15768 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.09■□□□□ 0.33
EFNB3Q15768 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
EFNB3Q15768 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.09■□□□□ 0.33
EFNB3Q15768 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.09■□□□□ 0.33
EFNB3Q15768 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EFNB3Q15768 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EFNB3Q15768 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
EFNB3Q15768 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
EFNB3Q15768 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EFNB3Q15768 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
EFNB3Q15768 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EFNB3Q15768 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
EFNB3Q15768 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC17.09■□□□□ 0.33
EFNB3Q15768 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EFNB3Q15768 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EFNB3Q15768 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
EFNB3Q15768 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC17.08■□□□□ 0.33
EFNB3Q15768 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
EFNB3Q15768 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
EFNB3Q15768 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
EFNB3Q15768 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
EFNB3Q15768 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.08■□□□□ 0.32
EFNB3Q15768 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
EFNB3Q15768 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
EFNB3Q15768 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.08■□□□□ 0.32
EFNB3Q15768 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
EFNB3Q15768 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
EFNB3Q15768 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
EFNB3Q15768 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
EFNB3Q15768 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
EFNB3Q15768 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
EFNB3Q15768 AC110285.5-201ENST00000611501 352 ntBASIC17.08■□□□□ 0.32
EFNB3Q15768 AL121906.2-201ENST00000621597 723 ntBASIC17.08■□□□□ 0.32
EFNB3Q15768 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
EFNB3Q15768 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
EFNB3Q15768 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
EFNB3Q15768 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
EFNB3Q15768 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
EFNB3Q15768 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
EFNB3Q15768 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
EFNB3Q15768 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC17.07■□□□□ 0.32
EFNB3Q15768 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.07■□□□□ 0.32
EFNB3Q15768 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
EFNB3Q15768 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
EFNB3Q15768 KRASP1-201ENST00000407852 552 ntBASIC17.07■□□□□ 0.32
EFNB3Q15768 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.07■□□□□ 0.32
EFNB3Q15768 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
EFNB3Q15768 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.07■□□□□ 0.32
EFNB3Q15768 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.07■□□□□ 0.32
EFNB3Q15768 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
EFNB3Q15768 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
EFNB3Q15768 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
EFNB3Q15768 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.07■□□□□ 0.32
EFNB3Q15768 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC17.07■□□□□ 0.32
EFNB3Q15768 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
EFNB3Q15768 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
EFNB3Q15768 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
EFNB3Q15768 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms