Protein–RNA interactions for Protein: Q08919

TRE1, Uncharacterized protein TRE1, yeastyeast

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TRE1Q08919 RTT107YHR154W 3213 nt2.17□□□□□ -2.06
TRE1Q08919 GIP3YPL137C 3831 nt2.16□□□□□ -2.06
TRE1Q08919 IST2YBR086C 2841 nt2.16□□□□□ -2.06
TRE1Q08919 TRL1YJL087C 2484 nt2.15□□□□□ -2.06
TRE1Q08919 YHR180W-AYHR180W-A 183 nt2.15□□□□□ -2.07
TRE1Q08919 YLL020CYLL020C 306 nt2.15□□□□□ -2.07
TRE1Q08919 YBL039C-AYBL039C-A 84 nt2.15□□□□□ -2.07
TRE1Q08919 GYP5YPL249C 2685 nt2.15□□□□□ -2.07
TRE1Q08919 KOG1YHR186C 4674 nt2.15□□□□□ -2.07
TRE1Q08919 CTR9YOL145C 3234 nt2.14□□□□□ -2.07
TRE1Q08919 UTP8YGR128C 2142 nt2.14□□□□□ -2.07
TRE1Q08919 YDL206WYDL206W 2289 nt2.14□□□□□ -2.07
TRE1Q08919 BFR2YDR299W 1605 nt2.13□□□□□ -2.07
TRE1Q08919 SEC31YDL195W 3822 nt2.13□□□□□ -2.07
TRE1Q08919 SYH1YPL105C 2550 nt2.13□□□□□ -2.07
TRE1Q08919 SPP41YDR464W 4308 nt2.13□□□□□ -2.07
TRE1Q08919 HSL1YKL101W 4557 nt2.12□□□□□ -2.07
TRE1Q08919 ADR1YDR216W 3972 nt2.12□□□□□ -2.07
TRE1Q08919 snR81snR81 201 nt2.12□□□□□ -2.07
TRE1Q08919 RPL37BYDR500C 267 nt2.12□□□□□ -2.07
TRE1Q08919 YGL123C-AYGL123C-A 231 nt2.12□□□□□ -2.07
TRE1Q08919 UFD2YDL190C 2886 nt2.12□□□□□ -2.07
TRE1Q08919 CDC60YPL160W 3273 nt2.11□□□□□ -2.07
TRE1Q08919 USO1YDL058W 5373 nt2.11□□□□□ -2.07
TRE1Q08919 SEC63YOR254C 1992 nt2.1□□□□□ -2.07
TRE1Q08919 RGA1YOR127W 3024 nt2.1□□□□□ -2.07
TRE1Q08919 REV3YPL167C 4515 nt2.1□□□□□ -2.07
TRE1Q08919 YER172C-AYER172C-A 381 nt2.1□□□□□ -2.07
TRE1Q08919 RTT101YJL047C 2529 nt2.1□□□□□ -2.07
TRE1Q08919 EAF1YDR359C 2949 nt2.09□□□□□ -2.08
TRE1Q08919 POL5YEL055C 3069 nt2.09□□□□□ -2.08
TRE1Q08919 IRE1YHR079C 3348 nt2.08□□□□□ -2.08
TRE1Q08919 NEO1YIL048W 3456 nt2.08□□□□□ -2.08
TRE1Q08919 YOR161W-AYOR161W-A 81 nt2.08□□□□□ -2.08
TRE1Q08919 PET309YLR067C 2898 nt2.08□□□□□ -2.08
TRE1Q08919 FRK1YPL141C 2598 nt2.07□□□□□ -2.08
TRE1Q08919 HIR3YJR140C 4947 nt2.07□□□□□ -2.08
TRE1Q08919 YJR039WYJR039W 3366 nt2.07□□□□□ -2.08
TRE1Q08919 TAH1YCR060W 336 nt2.06□□□□□ -2.08
TRE1Q08919 TDA9YML081W 3756 nt2.06□□□□□ -2.08
TRE1Q08919 COG6YNL041C 2520 nt2.03□□□□□ -2.08
TRE1Q08919 TRM3YDL112W 4311 nt2.03□□□□□ -2.08
TRE1Q08919 NUP157YER105C 4176 nt2.03□□□□□ -2.08
TRE1Q08919 COX5BYIL111W 456 nt2.03□□□□□ -2.08
TRE1Q08919 YKL100W-AYKL100W-A 90 nt2.03□□□□□ -2.08
TRE1Q08919 SPO24YPR036W-A 204 nt2.03□□□□□ -2.08
TRE1Q08919 YMR045CYMR045C 5268 nt2.03□□□□□ -2.09
TRE1Q08919 tM(CAU)Q2tM(CAU)Q2 78 nt2.02□□□□□ -2.09
TRE1Q08919 YAL037C-AYAL037C-A 93 nt2.02□□□□□ -2.09
TRE1Q08919 COA6YMR244C-A 315 nt2.02□□□□□ -2.09
TRE1Q08919 FAB1YFR019W 6837 nt2.02□□□□□ -2.09
TRE1Q08919 TBS1YBR150C 3285 nt2.02□□□□□ -2.09
TRE1Q08919 ATG9YDL149W 2994 nt2.01□□□□□ -2.09
TRE1Q08919 RSM22YKL155C 1887 nt2.01□□□□□ -2.09
TRE1Q08919 SEY1YOR165W 2331 nt2□□□□□ -2.09
TRE1Q08919 SFB2YNL049C 2631 nt2□□□□□ -2.09
TRE1Q08919 snR62snR62 100 nt2□□□□□ -2.09
TRE1Q08919 TOR2YKL203C 7425 nt2□□□□□ -2.09
TRE1Q08919 FKS1YLR342W 5631 nt1.99□□□□□ -2.09
TRE1Q08919 GCN2YDR283C 4980 nt1.99□□□□□ -2.09
TRE1Q08919 PEP1YBL017C 4740 nt1.98□□□□□ -2.09
TRE1Q08919 NUT1YGL151W 3399 nt1.98□□□□□ -2.09
TRE1Q08919 RTP1YMR185W 2946 nt1.97□□□□□ -2.09
TRE1Q08919 KAP120YPL125W 3099 nt1.97□□□□□ -2.09
TRE1Q08919 YDR210WYDR210W 228 nt1.96□□□□□ -2.1
TRE1Q08919 PDR8YLR266C 2106 nt1.95□□□□□ -2.1
TRE1Q08919 YBR072C-AYBR072C-A 162 nt1.95□□□□□ -2.1
TRE1Q08919 BIR1YJR089W 2865 nt1.95□□□□□ -2.1
TRE1Q08919 ALY2YJL084C 3141 nt1.95□□□□□ -2.1
TRE1Q08919 UTP21YLR409C 2820 nt1.95□□□□□ -2.1
TRE1Q08919 PAN2YGL094C 3348 nt1.94□□□□□ -2.1
TRE1Q08919 YMR272W-BYMR272W-B 108 nt1.94□□□□□ -2.1
TRE1Q08919 YNL266WYNL266W 420 nt1.94□□□□□ -2.1
TRE1Q08919 HER1YOR227W 3741 nt1.94□□□□□ -2.1
TRE1Q08919 YML002WYML002W 2214 nt1.94□□□□□ -2.1
TRE1Q08919 YLR419WYLR419W 4308 nt1.93□□□□□ -2.1
TRE1Q08919 UBR2YLR024C 5619 nt1.93□□□□□ -2.1
TRE1Q08919 MGA2YIR033W 3342 nt1.93□□□□□ -2.1
TRE1Q08919 YJL127W-AYJL127W-A 117 nt1.92□□□□□ -2.1
TRE1Q08919 SEC21YNL287W 2808 nt1.91□□□□□ -2.1
TRE1Q08919 RAD50YNL250W 3939 nt1.91□□□□□ -2.1
TRE1Q08919 YLR041WYLR041W 321 nt1.91□□□□□ -2.1
TRE1Q08919 MSH6YDR097C 3729 nt1.91□□□□□ -2.1
TRE1Q08919 BPH1YCR032W 6504 nt1.91□□□□□ -2.1
TRE1Q08919 YAR009CYAR009C 3591 nt1.9□□□□□ -2.1
TRE1Q08919 SEC1YDR164C 2175 nt1.9□□□□□ -2.11
TRE1Q08919 MMS4YBR098W 2076 nt1.9□□□□□ -2.11
TRE1Q08919 YOL083C-AYOL083C-A 141 nt1.89□□□□□ -2.11
TRE1Q08919 EMC5YIL027C 426 nt1.88□□□□□ -2.11
TRE1Q08919 YLR232WYLR232W 348 nt1.88□□□□□ -2.11
TRE1Q08919 FYV10YIL097W 1551 nt1.88□□□□□ -2.11
TRE1Q08919 TMA7YLR262C-A 195 nt1.87□□□□□ -2.11
TRE1Q08919 SMC1YFL008W 3678 nt1.86□□□□□ -2.11
TRE1Q08919 SLX4YLR135W 2247 nt1.86□□□□□ -2.11
TRE1Q08919 YGR146C-AYGR146C-A 162 nt1.86□□□□□ -2.11
TRE1Q08919 YBL071C-BYBL071C-B 99 nt1.85□□□□□ -2.11
TRE1Q08919 snR14snR14 160 nt1.85□□□□□ -2.11
TRE1Q08919 MYO2YOR326W 4725 nt1.85□□□□□ -2.11
TRE1Q08919 KIP1YBL063W 3336 nt1.84□□□□□ -2.11
TRE1Q08919 IRC20YLR247C 4671 nt1.84□□□□□ -2.11
Retrieved 100 of 7,029 protein–RNA pairs in 12.5 ms