Protein–RNA interactions for Protein: Q06696

VPS36, Vacuolar protein-sorting-associated protein 36, yeastyeast

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS36Q06696 YJL026C-AYJL026C-A 222 nt1.7□□□□□ -2.14
VPS36Q06696 YMR272W-BYMR272W-B 108 nt1.7□□□□□ -2.14
VPS36Q06696 TBS1YBR150C 3285 nt1.7□□□□□ -2.14
VPS36Q06696 PAN2YGL094C 3348 nt1.69□□□□□ -2.14
VPS36Q06696 SNU13YEL026W 381 nt1.69□□□□□ -2.14
VPS36Q06696 YCS4YLR272C 3531 nt1.69□□□□□ -2.14
VPS36Q06696 DNF3YMR162C 4971 nt1.69□□□□□ -2.14
VPS36Q06696 CTF4YPR135W 2784 nt1.69□□□□□ -2.14
VPS36Q06696 APL1YJR005W 2103 nt1.69□□□□□ -2.14
VPS36Q06696 SLX4YLR135W 2247 nt1.68□□□□□ -2.14
VPS36Q06696 KCS1YDR017C 3153 nt1.68□□□□□ -2.14
VPS36Q06696 PKH3YDR466W 2697 nt1.68□□□□□ -2.14
VPS36Q06696 YNL205CYNL205C 423 nt1.68□□□□□ -2.14
VPS36Q06696 FAB1YFR019W 6837 nt1.68□□□□□ -2.14
VPS36Q06696 YLR419WYLR419W 4308 nt1.66□□□□□ -2.14
VPS36Q06696 snR85snR85 171 nt1.66□□□□□ -2.14
VPS36Q06696 RPS30BYOR182C 192 nt1.66□□□□□ -2.14
VPS36Q06696 YPL044CYPL044C 549 nt1.66□□□□□ -2.14
VPS36Q06696 YBR221W-AYBR221W-A 105 nt1.66□□□□□ -2.14
VPS36Q06696 MDS3YGL197W 4464 nt1.65□□□□□ -2.14
VPS36Q06696 SMC4YLR086W 4257 nt1.65□□□□□ -2.14
VPS36Q06696 SAC3YDR159W 3906 nt1.65□□□□□ -2.15
VPS36Q06696 snR48snR48 113 nt1.65□□□□□ -2.15
VPS36Q06696 PAA1YDR071C 576 nt1.64□□□□□ -2.15
VPS36Q06696 COX12YLR038C 252 nt1.64□□□□□ -2.15
VPS36Q06696 YLR422WYLR422W 5799 nt1.64□□□□□ -2.15
VPS36Q06696 TTI1YKL033W 3117 nt1.64□□□□□ -2.15
VPS36Q06696 PIK1YNL267W 3201 nt1.63□□□□□ -2.15
VPS36Q06696 YJL022WYJL022W 309 nt1.63□□□□□ -2.15
VPS36Q06696 POL5YEL055C 3069 nt1.62□□□□□ -2.15
VPS36Q06696 YNL211CYNL211C 261 nt1.62□□□□□ -2.15
VPS36Q06696 SMC1YFL008W 3678 nt1.62□□□□□ -2.15
VPS36Q06696 YAR009CYAR009C 3591 nt1.6□□□□□ -2.15
VPS36Q06696 RSM22YKL155C 1887 nt1.6□□□□□ -2.15
VPS36Q06696 BPH1YCR032W 6504 nt1.6□□□□□ -2.15
VPS36Q06696 YCR038W-AYCR038W-A 126 nt1.6□□□□□ -2.15
VPS36Q06696 YAL067W-AYAL067W-A 228 nt1.6□□□□□ -2.15
VPS36Q06696 IRA1YBR140C 9279 nt1.6□□□□□ -2.15
VPS36Q06696 snR14snR14 160 nt1.59□□□□□ -2.15
VPS36Q06696 YOR102WYOR102W 351 nt1.58□□□□□ -2.16
VPS36Q06696 KAP122YGL016W 3246 nt1.57□□□□□ -2.16
VPS36Q06696 MON2YNL297C 4911 nt1.57□□□□□ -2.16
VPS36Q06696 YHL015W-AYHL015W-A 84 nt1.57□□□□□ -2.16
VPS36Q06696 YIL002W-AYIL002W-A 210 nt1.57□□□□□ -2.16
VPS36Q06696 COA6YMR244C-A 315 nt1.57□□□□□ -2.16
VPS36Q06696 BST1YFL025C 3090 nt1.56□□□□□ -2.16
VPS36Q06696 SSK2YNR031C 4740 nt1.55□□□□□ -2.16
VPS36Q06696 YOR019WYOR019W 2193 nt1.55□□□□□ -2.16
VPS36Q06696 EAF1YDR359C 2949 nt1.54□□□□□ -2.16
VPS36Q06696 YFR012W-AYFR012W-A 87 nt1.54□□□□□ -2.16
VPS36Q06696 YKL100W-AYKL100W-A 90 nt1.54□□□□□ -2.16
VPS36Q06696 STO1YMR125W 2586 nt1.54□□□□□ -2.16
VPS36Q06696 SET3YKR029C 2256 nt1.54□□□□□ -2.16
VPS36Q06696 CFT1YDR301W 4074 nt1.53□□□□□ -2.16
VPS36Q06696 PET127YOR017W 2403 nt1.53□□□□□ -2.16
VPS36Q06696 CDC31YOR257W 486 nt1.53□□□□□ -2.16
VPS36Q06696 YOR314W-AYOR314W-A 111 nt1.53□□□□□ -2.16
VPS36Q06696 CHS1YNL192W 3396 nt1.53□□□□□ -2.17
VPS36Q06696 SWI4YER111C 3282 nt1.53□□□□□ -2.17
VPS36Q06696 YGL123C-AYGL123C-A 231 nt1.52□□□□□ -2.17
VPS36Q06696 CDC25YLR310C 4770 nt1.52□□□□□ -2.17
VPS36Q06696 ROM2YLR371W 4071 nt1.52□□□□□ -2.17
VPS36Q06696 tL(UAA)QtL(UAA)Q 85 nt1.51□□□□□ -2.17
VPS36Q06696 PRP5YBR237W 2550 nt1.51□□□□□ -2.17
VPS36Q06696 BRR2YER172C 6492 nt1.5□□□□□ -2.17
VPS36Q06696 NUP145YGL092W 3954 nt1.5□□□□□ -2.17
VPS36Q06696 WAR1YML076C 2835 nt1.5□□□□□ -2.17
VPS36Q06696 YER053C-AYER053C-A 114 nt1.5□□□□□ -2.17
VPS36Q06696 CLU1YMR012W 3834 nt1.5□□□□□ -2.17
VPS36Q06696 FYV8YGR196C 2454 nt1.5□□□□□ -2.17
VPS36Q06696 APL3YBL037W 3078 nt1.5□□□□□ -2.17
VPS36Q06696 CMC4YMR194C-B 222 nt1.49□□□□□ -2.17
VPS36Q06696 YCL001W-BYCL001W-B 255 nt1.49□□□□□ -2.17
VPS36Q06696 NOP9YJL010C 2001 nt1.49□□□□□ -2.17
VPS36Q06696 AZF1YOR113W 2745 nt1.48□□□□□ -2.17
VPS36Q06696 SPC110YDR356W 2835 nt1.48□□□□□ -2.17
VPS36Q06696 YBR200W-AYBR200W-A 165 nt1.48□□□□□ -2.17
VPS36Q06696 TRM732YMR259C 4263 nt1.48□□□□□ -2.17
VPS36Q06696 UTP8YGR128C 2142 nt1.48□□□□□ -2.17
VPS36Q06696 COX5BYIL111W 456 nt1.47□□□□□ -2.17
VPS36Q06696 EST2YLR318W 2655 nt1.46□□□□□ -2.18
VPS36Q06696 YOR161W-AYOR161W-A 81 nt1.46□□□□□ -2.18
VPS36Q06696 BFR2YDR299W 1605 nt1.46□□□□□ -2.18
VPS36Q06696 SXM1YDR395W 2835 nt1.46□□□□□ -2.18
VPS36Q06696 YGL182CYGL182C 324 nt1.45□□□□□ -2.18
VPS36Q06696 tQ(UUG)E2tQ(UUG)E2 72 nt1.45□□□□□ -2.18
VPS36Q06696 CCH1YGR217W 6120 nt1.44□□□□□ -2.18
VPS36Q06696 RPL26BYGR034W 384 nt1.44□□□□□ -2.18
VPS36Q06696 YLR282CYLR282C 342 nt1.44□□□□□ -2.18
VPS36Q06696 YOR329W-AYOR329W-A 210 nt1.44□□□□□ -2.18
VPS36Q06696 MEC1YBR136W 7107 nt1.44□□□□□ -2.18
VPS36Q06696 YLL020CYLL020C 306 nt1.43□□□□□ -2.18
VPS36Q06696 YML002WYML002W 2214 nt1.43□□□□□ -2.18
VPS36Q06696 STB6YKL072W 2301 nt1.43□□□□□ -2.18
VPS36Q06696 PMD1YER132C 5262 nt1.42□□□□□ -2.18
VPS36Q06696 MSN5YDR335W 3675 nt1.41□□□□□ -2.18
VPS36Q06696 NUP188YML103C 4968 nt1.41□□□□□ -2.18
VPS36Q06696 SEC3YER008C 4011 nt1.4□□□□□ -2.18
VPS36Q06696 YBL039C-AYBL039C-A 84 nt1.4□□□□□ -2.19
VPS36Q06696 HKR1YDR420W 5409 nt1.4□□□□□ -2.19
Retrieved 100 of 7,029 protein–RNA pairs in 18.9 ms