Protein–RNA interactions for Protein: Q05541

NSE3, Non-structural maintenance of chromosome element 3, yeastyeast

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NSE3Q05541 SMC1YFL008W 3678 nt1.79□□□□□ -2.12
NSE3Q05541 NUP145YGL092W 3954 nt1.79□□□□□ -2.12
NSE3Q05541 ROM2YLR371W 4071 nt1.78□□□□□ -2.12
NSE3Q05541 YCR018C-AYCR018C-A 255 nt1.78□□□□□ -2.12
NSE3Q05541 STO1YMR125W 2586 nt1.78□□□□□ -2.12
NSE3Q05541 LAA1YJL207C 6045 nt1.76□□□□□ -2.13
NSE3Q05541 APL1YJR005W 2103 nt1.76□□□□□ -2.13
NSE3Q05541 YDR354C-AYDR354C-A 144 nt1.76□□□□□ -2.13
NSE3Q05541 YBR221W-AYBR221W-A 105 nt1.76□□□□□ -2.13
NSE3Q05541 VPS15YBR097W 4365 nt1.75□□□□□ -2.13
NSE3Q05541 APL3YBL037W 3078 nt1.75□□□□□ -2.13
NSE3Q05541 MSN5YDR335W 3675 nt1.75□□□□□ -2.13
NSE3Q05541 YGR130CYGR130C 2451 nt1.74□□□□□ -2.13
NSE3Q05541 CDC25YLR310C 4770 nt1.74□□□□□ -2.13
NSE3Q05541 PMD1YER132C 5262 nt1.74□□□□□ -2.13
NSE3Q05541 YBR200W-AYBR200W-A 165 nt1.74□□□□□ -2.13
NSE3Q05541 YJL026C-AYJL026C-A 222 nt1.73□□□□□ -2.13
NSE3Q05541 POL5YEL055C 3069 nt1.72□□□□□ -2.13
NSE3Q05541 YNL097C-BYNL097C-B 123 nt1.72□□□□□ -2.13
NSE3Q05541 WAR1YML076C 2835 nt1.72□□□□□ -2.13
NSE3Q05541 EAF1YDR359C 2949 nt1.72□□□□□ -2.13
NSE3Q05541 YBR131C-AYBR131C-A 90 nt1.71□□□□□ -2.14
NSE3Q05541 SSK2YNR031C 4740 nt1.71□□□□□ -2.14
NSE3Q05541 SEC3YER008C 4011 nt1.71□□□□□ -2.14
NSE3Q05541 RSM22YKL155C 1887 nt1.71□□□□□ -2.14
NSE3Q05541 MDS3YGL197W 4464 nt1.7□□□□□ -2.14
NSE3Q05541 NUP188YML103C 4968 nt1.7□□□□□ -2.14
NSE3Q05541 YAL067W-AYAL067W-A 228 nt1.7□□□□□ -2.14
NSE3Q05541 TRM732YMR259C 4263 nt1.69□□□□□ -2.14
NSE3Q05541 PAA1YDR071C 576 nt1.69□□□□□ -2.14
NSE3Q05541 YOR345CYOR345C 351 nt1.69□□□□□ -2.14
NSE3Q05541 CCH1YGR217W 6120 nt1.69□□□□□ -2.14
NSE3Q05541 tH(GUG)E1tH(GUG)E1 72 nt1.68□□□□□ -2.14
NSE3Q05541 tH(GUG)E2tH(GUG)E2 72 nt1.68□□□□□ -2.14
NSE3Q05541 tH(GUG)G1tH(GUG)G1 72 nt1.68□□□□□ -2.14
NSE3Q05541 tH(GUG)G2tH(GUG)G2 72 nt1.68□□□□□ -2.14
NSE3Q05541 tH(GUG)HtH(GUG)H 72 nt1.68□□□□□ -2.14
NSE3Q05541 tH(GUG)KtH(GUG)K 72 nt1.68□□□□□ -2.14
NSE3Q05541 tH(GUG)MtH(GUG)M 72 nt1.68□□□□□ -2.14
NSE3Q05541 YLL020CYLL020C 306 nt1.68□□□□□ -2.14
NSE3Q05541 YNL211CYNL211C 261 nt1.68□□□□□ -2.14
NSE3Q05541 SPC110YDR356W 2835 nt1.67□□□□□ -2.14
NSE3Q05541 IML1YJR138W 4755 nt1.66□□□□□ -2.14
NSE3Q05541 Q0032Q0032 291 nt1.66□□□□□ -2.14
NSE3Q05541 TTI1YKL033W 3117 nt1.66□□□□□ -2.14
NSE3Q05541 HAL9YOL089C 3093 nt1.65□□□□□ -2.15
NSE3Q05541 CMC4YMR194C-B 222 nt1.64□□□□□ -2.15
NSE3Q05541 NOP9YJL010C 2001 nt1.64□□□□□ -2.15
NSE3Q05541 snR46snR46 197 nt1.63□□□□□ -2.15
NSE3Q05541 YJL182CYJL182C 318 nt1.62□□□□□ -2.15
NSE3Q05541 RPS30BYOR182C 192 nt1.62□□□□□ -2.15
NSE3Q05541 SEC21YNL287W 2808 nt1.62□□□□□ -2.15
NSE3Q05541 NUP157YER105C 4176 nt1.62□□□□□ -2.15
NSE3Q05541 RPL33BYOR234C 324 nt1.61□□□□□ -2.15
NSE3Q05541 YPL044CYPL044C 549 nt1.6□□□□□ -2.15
NSE3Q05541 YGL007C-AYGL007C-A 87 nt1.59□□□□□ -2.15
NSE3Q05541 STF2YGR008C 255 nt1.59□□□□□ -2.15
NSE3Q05541 YKL100W-AYKL100W-A 90 nt1.59□□□□□ -2.15
NSE3Q05541 COX12YLR038C 252 nt1.59□□□□□ -2.15
NSE3Q05541 STB6YKL072W 2301 nt1.58□□□□□ -2.16
NSE3Q05541 RPL26BYGR034W 384 nt1.58□□□□□ -2.16
NSE3Q05541 tQ(UUG)E2tQ(UUG)E2 72 nt1.58□□□□□ -2.16
NSE3Q05541 YLR342W-AYLR342W-A 174 nt1.57□□□□□ -2.16
NSE3Q05541 YLR466C-BYLR466C-B 117 nt1.57□□□□□ -2.16
NSE3Q05541 HUG1YML058W-A 207 nt1.56□□□□□ -2.16
NSE3Q05541 YNL198CYNL198C 303 nt1.56□□□□□ -2.16
NSE3Q05541 snR52snR52 92 nt1.56□□□□□ -2.16
NSE3Q05541 GEA2YEL022W 4380 nt1.56□□□□□ -2.16
NSE3Q05541 COY1YKL179C 2040 nt1.56□□□□□ -2.16
NSE3Q05541 PIK1YNL267W 3201 nt1.55□□□□□ -2.16
NSE3Q05541 YGL123C-AYGL123C-A 231 nt1.55□□□□□ -2.16
NSE3Q05541 YIL134C-AYIL134C-A 204 nt1.55□□□□□ -2.16
NSE3Q05541 YJL150WYJL150W 303 nt1.55□□□□□ -2.16
NSE3Q05541 YOR225WYOR225W 330 nt1.55□□□□□ -2.16
NSE3Q05541 YGR151CYGR151C 336 nt1.54□□□□□ -2.16
NSE3Q05541 tV(UAC)BtV(UAC)B 74 nt1.54□□□□□ -2.16
NSE3Q05541 tV(UAC)DtV(UAC)D 74 nt1.54□□□□□ -2.16
NSE3Q05541 CDC39YCR093W 6327 nt1.54□□□□□ -2.16
NSE3Q05541 YEL073CYEL073C 324 nt1.53□□□□□ -2.16
NSE3Q05541 YIL002W-AYIL002W-A 210 nt1.53□□□□□ -2.16
NSE3Q05541 YCR038W-AYCR038W-A 126 nt1.52□□□□□ -2.17
NSE3Q05541 COX5BYIL111W 456 nt1.52□□□□□ -2.17
NSE3Q05541 HKR1YDR420W 5409 nt1.52□□□□□ -2.17
NSE3Q05541 YLR282CYLR282C 342 nt1.5□□□□□ -2.17
NSE3Q05541 SIP4YJL089W 2490 nt1.5□□□□□ -2.17
NSE3Q05541 PRP39YML046W 1890 nt1.5□□□□□ -2.17
NSE3Q05541 KAP120YPL125W 3099 nt1.48□□□□□ -2.17
NSE3Q05541 snR190snR190 190 nt1.47□□□□□ -2.17
NSE3Q05541 YML002WYML002W 2214 nt1.47□□□□□ -2.17
NSE3Q05541 PMP1YCR024C-A 123 nt1.46□□□□□ -2.18
NSE3Q05541 PET127YOR017W 2403 nt1.46□□□□□ -2.18
NSE3Q05541 FYV8YGR196C 2454 nt1.45□□□□□ -2.18
NSE3Q05541 YIL020C-AYIL020C-A 339 nt1.45□□□□□ -2.18
NSE3Q05541 ASE1YOR058C 2658 nt1.44□□□□□ -2.18
NSE3Q05541 RAD9YDR217C 3930 nt1.44□□□□□ -2.18
NSE3Q05541 YER053C-AYER053C-A 114 nt1.44□□□□□ -2.18
NSE3Q05541 YFR012W-AYFR012W-A 87 nt1.44□□□□□ -2.18
NSE3Q05541 YOR161W-AYOR161W-A 81 nt1.44□□□□□ -2.18
NSE3Q05541 SEC8YPR055W 3198 nt1.44□□□□□ -2.18
NSE3Q05541 UTP8YGR128C 2142 nt1.43□□□□□ -2.18
Retrieved 100 of 7,029 protein–RNA pairs in 58.2 ms