Protein–RNA interactions for Protein: Q04377

LCD1, DNA damage checkpoint protein LCD1, yeastyeast

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LCD1Q04377 PAA1YDR071C 576 nt1.9□□□□□ -2.11
LCD1Q04377 STF2YGR008C 255 nt1.9□□□□□ -2.11
LCD1Q04377 tT(UGU)HtT(UGU)H 72 nt1.9□□□□□ -2.11
LCD1Q04377 SKI3YPR189W 4299 nt1.9□□□□□ -2.11
LCD1Q04377 PMD1YER132C 5262 nt1.9□□□□□ -2.11
LCD1Q04377 UFD2YDL190C 2886 nt1.9□□□□□ -2.11
LCD1Q04377 YLR422WYLR422W 5799 nt1.89□□□□□ -2.11
LCD1Q04377 PEP1YBL017C 4740 nt1.89□□□□□ -2.11
LCD1Q04377 COX12YLR038C 252 nt1.89□□□□□ -2.11
LCD1Q04377 APL1YJR005W 2103 nt1.88□□□□□ -2.11
LCD1Q04377 CFT1YDR301W 4074 nt1.88□□□□□ -2.11
LCD1Q04377 PRP42YDR235W 1635 nt1.88□□□□□ -2.11
LCD1Q04377 KCS1YDR017C 3153 nt1.88□□□□□ -2.11
LCD1Q04377 SLX4YLR135W 2247 nt1.87□□□□□ -2.11
LCD1Q04377 YPL044CYPL044C 549 nt1.87□□□□□ -2.11
LCD1Q04377 YBR221W-AYBR221W-A 105 nt1.87□□□□□ -2.11
LCD1Q04377 MMS4YBR098W 2076 nt1.86□□□□□ -2.11
LCD1Q04377 SMC4YLR086W 4257 nt1.86□□□□□ -2.11
LCD1Q04377 DNF3YMR162C 4971 nt1.86□□□□□ -2.11
LCD1Q04377 PAN2YGL094C 3348 nt1.86□□□□□ -2.11
LCD1Q04377 TTI1YKL033W 3117 nt1.85□□□□□ -2.11
LCD1Q04377 YJL022WYJL022W 309 nt1.85□□□□□ -2.11
LCD1Q04377 YBL053WYBL053W 375 nt1.85□□□□□ -2.11
LCD1Q04377 VPS15YBR097W 4365 nt1.84□□□□□ -2.11
LCD1Q04377 MON2YNL297C 4911 nt1.84□□□□□ -2.11
LCD1Q04377 YCR038W-AYCR038W-A 126 nt1.84□□□□□ -2.11
LCD1Q04377 snR14snR14 160 nt1.84□□□□□ -2.11
LCD1Q04377 YAL067W-AYAL067W-A 228 nt1.83□□□□□ -2.12
LCD1Q04377 POL5YEL055C 3069 nt1.83□□□□□ -2.12
LCD1Q04377 YLL054CYLL054C 2532 nt1.82□□□□□ -2.12
LCD1Q04377 SNU13YEL026W 381 nt1.82□□□□□ -2.12
LCD1Q04377 IRA1YBR140C 9279 nt1.82□□□□□ -2.12
LCD1Q04377 COA6YMR244C-A 315 nt1.81□□□□□ -2.12
LCD1Q04377 YNL211CYNL211C 261 nt1.81□□□□□ -2.12
LCD1Q04377 YAR009CYAR009C 3591 nt1.8□□□□□ -2.12
LCD1Q04377 YIL002W-AYIL002W-A 210 nt1.8□□□□□ -2.12
LCD1Q04377 YCS4YLR272C 3531 nt1.8□□□□□ -2.12
LCD1Q04377 PKH3YDR466W 2697 nt1.8□□□□□ -2.12
LCD1Q04377 Q0143Q0143 153 nt1.78□□□□□ -2.12
LCD1Q04377 KAP122YGL016W 3246 nt1.77□□□□□ -2.13
LCD1Q04377 SAC3YDR159W 3906 nt1.76□□□□□ -2.13
LCD1Q04377 BRR2YER172C 6492 nt1.76□□□□□ -2.13
LCD1Q04377 YIL020C-AYIL020C-A 339 nt1.76□□□□□ -2.13
LCD1Q04377 MEC1YBR136W 7107 nt1.76□□□□□ -2.13
LCD1Q04377 RSM22YKL155C 1887 nt1.75□□□□□ -2.13
LCD1Q04377 tQ(UUG)E2tQ(UUG)E2 72 nt1.75□□□□□ -2.13
LCD1Q04377 YHL015W-AYHL015W-A 84 nt1.75□□□□□ -2.13
LCD1Q04377 YOR102WYOR102W 351 nt1.75□□□□□ -2.13
LCD1Q04377 CDC31YOR257W 486 nt1.74□□□□□ -2.13
LCD1Q04377 SXM1YDR395W 2835 nt1.74□□□□□ -2.13
LCD1Q04377 SMC1YFL008W 3678 nt1.73□□□□□ -2.13
LCD1Q04377 PRP5YBR237W 2550 nt1.73□□□□□ -2.13
LCD1Q04377 YGL123C-AYGL123C-A 231 nt1.73□□□□□ -2.13
LCD1Q04377 FIG2YCR089W 4830 nt1.73□□□□□ -2.13
LCD1Q04377 SSK2YNR031C 4740 nt1.73□□□□□ -2.13
LCD1Q04377 SET3YKR029C 2256 nt1.73□□□□□ -2.13
LCD1Q04377 STO1YMR125W 2586 nt1.72□□□□□ -2.13
LCD1Q04377 CCH1YGR217W 6120 nt1.72□□□□□ -2.13
LCD1Q04377 YER053C-AYER053C-A 114 nt1.72□□□□□ -2.13
LCD1Q04377 CHS1YNL192W 3396 nt1.72□□□□□ -2.13
LCD1Q04377 PET127YOR017W 2403 nt1.71□□□□□ -2.14
LCD1Q04377 snR48snR48 113 nt1.69□□□□□ -2.14
LCD1Q04377 PIK1YNL267W 3201 nt1.68□□□□□ -2.14
LCD1Q04377 BST1YFL025C 3090 nt1.68□□□□□ -2.14
LCD1Q04377 TRM732YMR259C 4263 nt1.68□□□□□ -2.14
LCD1Q04377 YKL100W-AYKL100W-A 90 nt1.68□□□□□ -2.14
LCD1Q04377 CMC4YMR194C-B 222 nt1.68□□□□□ -2.14
LCD1Q04377 YOR161W-AYOR161W-A 81 nt1.68□□□□□ -2.14
LCD1Q04377 YOR314W-AYOR314W-A 111 nt1.68□□□□□ -2.14
LCD1Q04377 YOR019WYOR019W 2193 nt1.68□□□□□ -2.14
LCD1Q04377 SWI4YER111C 3282 nt1.67□□□□□ -2.14
LCD1Q04377 COX5BYIL111W 456 nt1.67□□□□□ -2.14
LCD1Q04377 EAF1YDR359C 2949 nt1.67□□□□□ -2.14
LCD1Q04377 WAR1YML076C 2835 nt1.67□□□□□ -2.14
LCD1Q04377 YGR130CYGR130C 2451 nt1.66□□□□□ -2.14
LCD1Q04377 BFR2YDR299W 1605 nt1.66□□□□□ -2.14
LCD1Q04377 APL3YBL037W 3078 nt1.66□□□□□ -2.14
LCD1Q04377 NOP9YJL010C 2001 nt1.66□□□□□ -2.14
LCD1Q04377 YFR012W-AYFR012W-A 87 nt1.65□□□□□ -2.15
LCD1Q04377 UTP8YGR128C 2142 nt1.65□□□□□ -2.15
LCD1Q04377 FYV8YGR196C 2454 nt1.64□□□□□ -2.15
LCD1Q04377 YLR282CYLR282C 342 nt1.64□□□□□ -2.15
LCD1Q04377 SPC110YDR356W 2835 nt1.62□□□□□ -2.15
LCD1Q04377 tL(UAA)QtL(UAA)Q 85 nt1.62□□□□□ -2.15
LCD1Q04377 YGL182CYGL182C 324 nt1.62□□□□□ -2.15
LCD1Q04377 YLL020CYLL020C 306 nt1.62□□□□□ -2.15
LCD1Q04377 YNL205CYNL205C 423 nt1.62□□□□□ -2.15
LCD1Q04377 CAT8YMR280C 4302 nt1.62□□□□□ -2.15
LCD1Q04377 NUP188YML103C 4968 nt1.61□□□□□ -2.15
LCD1Q04377 NUP145YGL092W 3954 nt1.61□□□□□ -2.15
LCD1Q04377 AZF1YOR113W 2745 nt1.6□□□□□ -2.15
LCD1Q04377 PAU12YGR294W 363 nt1.6□□□□□ -2.15
LCD1Q04377 YBR200W-AYBR200W-A 165 nt1.6□□□□□ -2.15
LCD1Q04377 PAU24YBR301W 363 nt1.6□□□□□ -2.15
LCD1Q04377 YML002WYML002W 2214 nt1.6□□□□□ -2.15
LCD1Q04377 GEA2YEL022W 4380 nt1.6□□□□□ -2.15
LCD1Q04377 EST2YLR318W 2655 nt1.59□□□□□ -2.15
LCD1Q04377 NUP157YER105C 4176 nt1.59□□□□□ -2.15
LCD1Q04377 snR85snR85 171 nt1.59□□□□□ -2.15
LCD1Q04377 YBL039C-AYBL039C-A 84 nt1.58□□□□□ -2.16
Retrieved 100 of 7,029 protein–RNA pairs in 12.3 ms