Protein–RNA interactions for Protein: Q03308

VPS16, Vacuolar protein sorting-associated protein 16, yeastyeast

Predictions only

Length 798 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS16Q03308 RPS30BYOR182C 192 nt1.96□□□□□ -2.1
VPS16Q03308 YLR422WYLR422W 5799 nt1.95□□□□□ -2.1
VPS16Q03308 YJL026C-AYJL026C-A 222 nt1.95□□□□□ -2.1
VPS16Q03308 SMC1YFL008W 3678 nt1.95□□□□□ -2.1
VPS16Q03308 RTP1YMR185W 2946 nt1.95□□□□□ -2.1
VPS16Q03308 PAA1YDR071C 576 nt1.94□□□□□ -2.1
VPS16Q03308 PRP42YDR235W 1635 nt1.93□□□□□ -2.1
VPS16Q03308 YBL053WYBL053W 375 nt1.93□□□□□ -2.1
VPS16Q03308 YPL044CYPL044C 549 nt1.93□□□□□ -2.1
VPS16Q03308 YAR009CYAR009C 3591 nt1.93□□□□□ -2.1
VPS16Q03308 YHR214C-BYHR214C-B 5382 nt1.93□□□□□ -2.1
VPS16Q03308 FAB1YFR019W 6837 nt1.93□□□□□ -2.1
VPS16Q03308 BST1YFL025C 3090 nt1.92□□□□□ -2.1
VPS16Q03308 KAP122YGL016W 3246 nt1.92□□□□□ -2.1
VPS16Q03308 COX12YLR038C 252 nt1.92□□□□□ -2.1
VPS16Q03308 snR14snR14 160 nt1.92□□□□□ -2.1
VPS16Q03308 YOR019WYOR019W 2193 nt1.92□□□□□ -2.1
VPS16Q03308 YCR038W-AYCR038W-A 126 nt1.91□□□□□ -2.1
VPS16Q03308 YNL211CYNL211C 261 nt1.91□□□□□ -2.1
VPS16Q03308 MON2YNL297C 4911 nt1.91□□□□□ -2.1
VPS16Q03308 TTI1YKL033W 3117 nt1.91□□□□□ -2.1
VPS16Q03308 YBR221W-AYBR221W-A 105 nt1.9□□□□□ -2.11
VPS16Q03308 RSM22YKL155C 1887 nt1.9□□□□□ -2.11
VPS16Q03308 YAL067W-AYAL067W-A 228 nt1.89□□□□□ -2.11
VPS16Q03308 COA6YMR244C-A 315 nt1.88□□□□□ -2.11
VPS16Q03308 YOR093CYOR093C 4947 nt1.87□□□□□ -2.11
VPS16Q03308 POL5YEL055C 3069 nt1.87□□□□□ -2.11
VPS16Q03308 IRC20YLR247C 4671 nt1.86□□□□□ -2.11
VPS16Q03308 STO1YMR125W 2586 nt1.86□□□□□ -2.11
VPS16Q03308 SWI4YER111C 3282 nt1.86□□□□□ -2.11
VPS16Q03308 Q0143Q0143 153 nt1.86□□□□□ -2.11
VPS16Q03308 SET3YKR029C 2256 nt1.86□□□□□ -2.11
VPS16Q03308 SNU13YEL026W 381 nt1.85□□□□□ -2.11
VPS16Q03308 EAF1YDR359C 2949 nt1.84□□□□□ -2.11
VPS16Q03308 tT(UGU)HtT(UGU)H 72 nt1.84□□□□□ -2.11
VPS16Q03308 YIL020C-AYIL020C-A 339 nt1.84□□□□□ -2.11
VPS16Q03308 YIL002W-AYIL002W-A 210 nt1.83□□□□□ -2.12
VPS16Q03308 CLU1YMR012W 3834 nt1.83□□□□□ -2.12
VPS16Q03308 NUP145YGL092W 3954 nt1.83□□□□□ -2.12
VPS16Q03308 ROM2YLR371W 4071 nt1.83□□□□□ -2.12
VPS16Q03308 AZF1YOR113W 2745 nt1.82□□□□□ -2.12
VPS16Q03308 CDC25YLR310C 4770 nt1.82□□□□□ -2.12
VPS16Q03308 WAR1YML076C 2835 nt1.81□□□□□ -2.12
VPS16Q03308 APL3YBL037W 3078 nt1.81□□□□□ -2.12
VPS16Q03308 YHL015W-AYHL015W-A 84 nt1.81□□□□□ -2.12
VPS16Q03308 YKL100W-AYKL100W-A 90 nt1.81□□□□□ -2.12
VPS16Q03308 YOR102WYOR102W 351 nt1.81□□□□□ -2.12
VPS16Q03308 EST2YLR318W 2655 nt1.8□□□□□ -2.12
VPS16Q03308 MYO2YOR326W 4725 nt1.79□□□□□ -2.12
VPS16Q03308 YBR200W-AYBR200W-A 165 nt1.79□□□□□ -2.12
VPS16Q03308 VPS15YBR097W 4365 nt1.79□□□□□ -2.12
VPS16Q03308 SXM1YDR395W 2835 nt1.79□□□□□ -2.12
VPS16Q03308 PRP5YBR237W 2550 nt1.78□□□□□ -2.12
VPS16Q03308 CMC4YMR194C-B 222 nt1.78□□□□□ -2.12
VPS16Q03308 YER053C-AYER053C-A 114 nt1.77□□□□□ -2.13
VPS16Q03308 YGL123C-AYGL123C-A 231 nt1.77□□□□□ -2.13
VPS16Q03308 YMR272W-BYMR272W-B 108 nt1.77□□□□□ -2.13
VPS16Q03308 PEP1YBL017C 4740 nt1.77□□□□□ -2.13
VPS16Q03308 NOP9YJL010C 2001 nt1.76□□□□□ -2.13
VPS16Q03308 YMR247W-AYMR247W-A 144 nt1.76□□□□□ -2.13
VPS16Q03308 snR48snR48 113 nt1.76□□□□□ -2.13
VPS16Q03308 PMD1YER132C 5262 nt1.75□□□□□ -2.13
VPS16Q03308 DNF3YMR162C 4971 nt1.74□□□□□ -2.13
VPS16Q03308 IRA1YBR140C 9279 nt1.74□□□□□ -2.13
VPS16Q03308 YOR314W-AYOR314W-A 111 nt1.74□□□□□ -2.13
VPS16Q03308 MSN5YDR335W 3675 nt1.73□□□□□ -2.13
VPS16Q03308 CFT1YDR301W 4074 nt1.73□□□□□ -2.13
VPS16Q03308 YOR161W-AYOR161W-A 81 nt1.73□□□□□ -2.13
VPS16Q03308 SEC3YER008C 4011 nt1.72□□□□□ -2.13
VPS16Q03308 NUP188YML103C 4968 nt1.72□□□□□ -2.13
VPS16Q03308 FIG2YCR089W 4830 nt1.72□□□□□ -2.13
VPS16Q03308 COX5BYIL111W 456 nt1.72□□□□□ -2.13
VPS16Q03308 YNL205CYNL205C 423 nt1.72□□□□□ -2.13
VPS16Q03308 RPL26BYGR034W 384 nt1.71□□□□□ -2.14
VPS16Q03308 UTP8YGR128C 2142 nt1.71□□□□□ -2.14
VPS16Q03308 YLL020CYLL020C 306 nt1.7□□□□□ -2.14
VPS16Q03308 CDC31YOR257W 486 nt1.7□□□□□ -2.14
VPS16Q03308 BFR2YDR299W 1605 nt1.69□□□□□ -2.14
VPS16Q03308 YLR282CYLR282C 342 nt1.69□□□□□ -2.14
VPS16Q03308 TRM732YMR259C 4263 nt1.68□□□□□ -2.14
VPS16Q03308 snR85snR85 171 nt1.68□□□□□ -2.14
VPS16Q03308 YFR012W-AYFR012W-A 87 nt1.68□□□□□ -2.14
VPS16Q03308 MEC1YBR136W 7107 nt1.68□□□□□ -2.14
VPS16Q03308 YML002WYML002W 2214 nt1.67□□□□□ -2.14
VPS16Q03308 GEA2YEL022W 4380 nt1.67□□□□□ -2.14
VPS16Q03308 CHS1YNL192W 3396 nt1.66□□□□□ -2.14
VPS16Q03308 tL(UAA)QtL(UAA)Q 85 nt1.66□□□□□ -2.14
VPS16Q03308 YGL182CYGL182C 324 nt1.66□□□□□ -2.14
VPS16Q03308 NUP157YER105C 4176 nt1.66□□□□□ -2.14
VPS16Q03308 YCL001W-BYCL001W-B 255 nt1.64□□□□□ -2.15
VPS16Q03308 snR190snR190 190 nt1.63□□□□□ -2.15
VPS16Q03308 SPC110YDR356W 2835 nt1.62□□□□□ -2.15
VPS16Q03308 ANS1YHR126C 480 nt1.62□□□□□ -2.15
VPS16Q03308 CHS6YJL099W 2241 nt1.62□□□□□ -2.15
VPS16Q03308 YBL039C-AYBL039C-A 84 nt1.61□□□□□ -2.15
VPS16Q03308 BRR2YER172C 6492 nt1.6□□□□□ -2.15
VPS16Q03308 STB6YKL072W 2301 nt1.6□□□□□ -2.15
VPS16Q03308 TAH1YCR060W 336 nt1.59□□□□□ -2.15
VPS16Q03308 NUP192YJL039C 5052 nt1.59□□□□□ -2.16
VPS16Q03308 SEC21YNL287W 2808 nt1.58□□□□□ -2.16
Retrieved 100 of 7,029 protein–RNA pairs in 7.2 ms