Protein–RNA interactions for Protein: Q01844

EWSR1, RNA-binding protein EWS, humanhuman

Known RBP eCLIP

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1Q01844 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.089e-7■□□□□ 10.2
EWSR1Q01844 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC14.89□□□□□ -0.039e-7■□□□□ 10.2
EWSR1Q01844 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.16□□□□□ -0.149e-7■□□□□ 10.2
EWSR1Q01844 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC14.12□□□□□ -0.159e-7■□□□□ 10.2
EWSR1Q01844 EEF1D-208ENST00000524883 828 ntTSL 213.58□□□□□ -0.249e-7■□□□□ 10.2
EWSR1Q01844 EIF3B-207ENST00000465670 2766 ntTSL 212.68□□□□□ -0.389e-7■□□□□ 10.2
EWSR1Q01844 EIF3B-210ENST00000468611 1868 ntTSL 212.12□□□□□ -0.479e-7■□□□□ 10.2
EWSR1Q01844 EIF3B-211ENST00000475415 3745 ntTSL 28.95□□□□□ -0.989e-7■□□□□ 10.2
EWSR1Q01844 SLC4A2-206ENST00000466368 548 ntTSL 411.25□□□□□ -0.611e-6■□□□□ 10.2
EWSR1Q01844 CALM2-207ENST00000484408 682 ntTSL 516.07■□□□□ 0.164e-7■□□□□ 10.2
EWSR1Q01844 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.194e-7■□□□□ 10.2
EWSR1Q01844 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC13.37□□□□□ -0.274e-7■□□□□ 10.2
EWSR1Q01844 CALM2-208ENST00000489742 522 ntTSL 311.64□□□□□ -0.554e-7■□□□□ 10.2
EWSR1Q01844 CALM2-203ENST00000432899 1004 ntTSL 510.07□□□□□ -0.84e-7■□□□□ 10.2
EWSR1Q01844 STPG4-206ENST00000422269 983 ntTSL 29.06□□□□□ -0.964e-7■□□□□ 10.2
EWSR1Q01844 CALM2-202ENST00000409563 770 ntTSL 5 BASIC7.28□□□□□ -1.244e-7■□□□□ 10.2
EWSR1Q01844 CALM2-204ENST00000456319 703 ntTSL 22.16□□□□□ -2.064e-7■□□□□ 10.2
EWSR1Q01844 MTA1-211ENST00000481206 842 ntTSL 215.12■□□□□ 0.012e-7■□□□□ 10.2
EWSR1Q01844 FAM229A-202ENST00000416512 2759 ntTSL 1 (best)15.87■□□□□ 0.132e-9■□□□□ 10.2
EWSR1Q01844 FAM229A-201ENST00000415596 446 ntTSL 311.68□□□□□ -0.542e-9■□□□□ 10.2
EWSR1Q01844 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC15.56■□□□□ 0.083e-8■□□□□ 10.2
EWSR1Q01844 FASTK-208ENST00000467237 3011 ntTSL 1 (best)12.74□□□□□ -0.373e-6■□□□□ 10.1
EWSR1Q01844 ATXN2L-210ENST00000562867 609 ntTSL 213.2□□□□□ -0.39e-7■□□□□ 10.1
EWSR1Q01844 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.329e-7■□□□□ 10.1
EWSR1Q01844 ATXN2L-211ENST00000563314 4574 ntTSL 512.88□□□□□ -0.359e-7■□□□□ 10.1
EWSR1Q01844 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.379e-7■□□□□ 10.1
EWSR1Q01844 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.499e-7■□□□□ 10.1
EWSR1Q01844 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.559e-7■□□□□ 10.1
EWSR1Q01844 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.559e-7■□□□□ 10.1
EWSR1Q01844 ATXN2L-201ENST00000325215 3788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.599e-7■□□□□ 10.1
EWSR1Q01844 ATXN2L-203ENST00000340394 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.659e-7■□□□□ 10.1
EWSR1Q01844 ATXN2L-223ENST00000568266 1294 ntTSL 512.61□□□□□ -0.392e-6■□□□□ 10.1
EWSR1Q01844 HMGB2-204ENST00000506267 629 ntTSL 316.48■□□□□ 0.231e-10■□□□□ 10.1
EWSR1Q01844 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.581e-10■□□□□ 10.1
EWSR1Q01844 HMGB2-205ENST00000511316 1841 ntTSL 211.04□□□□□ -0.641e-10■□□□□ 10.1
EWSR1Q01844 HMGB2-201ENST00000296503 1889 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.911e-10■□□□□ 10.1
EWSR1Q01844 PTMS-205ENST00000540828 644 ntTSL 1 (best)15.48■□□□□ 0.073e-7■□□□□ 10.1
EWSR1Q01844 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.023e-7■□□□□ 10.1
EWSR1Q01844 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.033e-7■□□□□ 10.1
EWSR1Q01844 PTMS-206ENST00000540874 501 ntTSL 213.57□□□□□ -0.243e-7■□□□□ 10.1
EWSR1Q01844 PTMS-202ENST00000389462 773 ntTSL 2 BASIC12.14□□□□□ -0.473e-7■□□□□ 10.1
EWSR1Q01844 PTMS-204ENST00000540667 820 ntTSL 210.17□□□□□ -0.783e-7■□□□□ 10.1
EWSR1Q01844 PCGF3-212ENST00000488032 263 ntTSL 43.7□□□□□ -1.824e-9■□□□□ 9.9
EWSR1Q01844 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.433e-7■□□□□ 9.9
EWSR1Q01844 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.573e-7■□□□□ 9.9
EWSR1Q01844 NAP1L1-214ENST00000548273 818 ntTSL 39.67□□□□□ -0.863e-7■□□□□ 9.9
EWSR1Q01844 NAP1L1-210ENST00000547773 1967 ntTSL 5 BASIC9.32□□□□□ -0.923e-7■□□□□ 9.9
EWSR1Q01844 NAP1L1-216ENST00000549596 1838 ntTSL 2 BASIC9.15□□□□□ -0.953e-7■□□□□ 9.9
EWSR1Q01844 NAP1L1-226ENST00000552342 1526 ntTSL 5 BASIC9.13□□□□□ -0.953e-7■□□□□ 9.9
EWSR1Q01844 NAP1L1-203ENST00000431879 2031 ntTSL 2 BASIC9□□□□□ -0.973e-7■□□□□ 9.9
EWSR1Q01844 NAP1L1-205ENST00000542344 1675 ntTSL 2 BASIC8.91□□□□□ -0.983e-7■□□□□ 9.9
EWSR1Q01844 NAP1L1-206ENST00000544816 1597 ntTSL 2 BASIC8.88□□□□□ -0.993e-7■□□□□ 9.9
EWSR1Q01844 NAP1L1-217ENST00000549988 544 ntTSL 38.86□□□□□ -0.993e-7■□□□□ 9.9
EWSR1Q01844 NAP1L1-215ENST00000549479 573 ntTSL 28.44□□□□□ -1.063e-7■□□□□ 9.9
EWSR1Q01844 NAP1L1-209ENST00000547704 760 ntTSL 57.54□□□□□ -1.23e-7■□□□□ 9.9
EWSR1Q01844 NAP1L1-221ENST00000551600 786 ntTSL 57.54□□□□□ -1.23e-7■□□□□ 9.9
EWSR1Q01844 NAP1L1-213ENST00000548044 1339 ntTSL 5 BASIC7.52□□□□□ -1.23e-7■□□□□ 9.9
EWSR1Q01844 NAP1L1-207ENST00000547479 623 ntTSL 57.21□□□□□ -1.263e-7■□□□□ 9.9
EWSR1Q01844 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.523e-7■□□□□ 9.9
EWSR1Q01844 NAP1L1-219ENST00000551500 552 ntTSL 1 (best)4.12□□□□□ -1.753e-7■□□□□ 9.9
EWSR1Q01844 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC3.9□□□□□ -1.783e-7■□□□□ 9.9
EWSR1Q01844 NAP1L1-218ENST00000550934 851 ntTSL 52.81□□□□□ -1.963e-7■□□□□ 9.9
EWSR1Q01844 SQSTM1-201ENST00000360718 2253 ntTSL 1 (best) BASIC11.05□□□□□ -0.648e-8■□□□□ 9.9
EWSR1Q01844 NUP210-202ENST00000420141 3134 ntTSL 1 (best)19.71■□□□□ 0.752e-6■□□□□ 9.9
EWSR1Q01844 CYTH3-208ENST00000482460 557 ntTSL 316.69■□□□□ 0.262e-6■□□□□ 9.9
EWSR1Q01844 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.362e-6■□□□□ 9.9
EWSR1Q01844 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.362e-6■□□□□ 9.9
EWSR1Q01844 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.412e-6■□□□□ 9.9
EWSR1Q01844 TPD52L2-208ENST00000474176 4053 ntTSL 29.03□□□□□ -0.961e-8■□□□□ 9.8
EWSR1Q01844 PHF19-207ENST00000456291 888 ntTSL 317.55■□□□□ 0.46e-8■□□□□ 9.8
EWSR1Q01844 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC17.34■□□□□ 0.375e-12■□□□□ 9.8
EWSR1Q01844 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC16.77■□□□□ 0.282e-6■□□□□ 9.8
EWSR1Q01844 SLC25A39-205ENST00000585636 561 ntTSL 216.77■□□□□ 0.282e-6■□□□□ 9.8
EWSR1Q01844 SLC25A39-206ENST00000585695 1121 ntTSL 216.77■□□□□ 0.282e-6■□□□□ 9.8
EWSR1Q01844 ARL5A-205ENST00000487723 696 ntTSL 316.65■□□□□ 0.266e-8■□□□□ 9.8
EWSR1Q01844 TIMM44-208ENST00000598968 797 ntTSL 316.62■□□□□ 0.252e-6■□□□□ 9.8
EWSR1Q01844 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.212e-6■□□□□ 9.8
EWSR1Q01844 SLC25A39-216ENST00000592857 837 ntTSL 315.98■□□□□ 0.152e-6■□□□□ 9.8
EWSR1Q01844 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.16e-8■□□□□ 9.8
EWSR1Q01844 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.092e-6■□□□□ 9.8
EWSR1Q01844 SLC25A39-210ENST00000588315 1409 ntTSL 215.39■□□□□ 0.052e-6■□□□□ 9.8
EWSR1Q01844 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC15.25■□□□□ 0.036e-8■□□□□ 9.8
EWSR1Q01844 ARL5A-204ENST00000458140 1076 ntTSL 515.08■□□□□ 06e-8■□□□□ 9.8
EWSR1Q01844 SLC25A39-204ENST00000585523 574 ntTSL 414.59□□□□□ -0.072e-6■□□□□ 9.8
EWSR1Q01844 SLC25A39-209ENST00000588049 839 ntTSL 514.59□□□□□ -0.072e-6■□□□□ 9.8
EWSR1Q01844 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.112e-6■□□□□ 9.8
EWSR1Q01844 TLK1-203ENST00000409443 2783 ntTSL 214.3□□□□□ -0.122e-6■□□□□ 9.8
EWSR1Q01844 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.182e-6■□□□□ 9.8
EWSR1Q01844 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.22e-6■□□□□ 9.8
EWSR1Q01844 SLC25A39-208ENST00000586633 566 ntTSL 313.08□□□□□ -0.322e-6■□□□□ 9.8
EWSR1Q01844 TIMM44-206ENST00000598481 587 ntTSL 212.99□□□□□ -0.332e-6■□□□□ 9.8
EWSR1Q01844 TIMM44-203ENST00000595831 1797 ntTSL 512.83□□□□□ -0.362e-6■□□□□ 9.8
EWSR1Q01844 TLK1-204ENST00000413010 603 ntTSL 512.52□□□□□ -0.412e-6■□□□□ 9.8
EWSR1Q01844 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC12.28□□□□□ -0.446e-8■□□□□ 9.8
EWSR1Q01844 JMJD1C-211ENST00000633035 499 ntTSL 312.08□□□□□ -0.482e-6■□□□□ 9.8
EWSR1Q01844 MIR210HG-202ENST00000528245 659 ntTSL 311.84□□□□□ -0.515e-12■□□□□ 9.8
EWSR1Q01844 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC11.81□□□□□ -0.525e-12■□□□□ 9.8
EWSR1Q01844 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC11.5□□□□□ -0.572e-6■□□□□ 9.8
EWSR1Q01844 PHF19-202ENST00000373896 4241 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.596e-8■□□□□ 9.8
EWSR1Q01844 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC11.07□□□□□ -0.642e-6■□□□□ 9.8
Retrieved 100 of 7,101 protein–RNA pairs in 30.7 ms