Protein–RNA interactions for Protein: P89105

CTR9, RNA polymerase-associated protein CTR9, yeastyeast

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CTR9P89105 FKS1YLR342W 5631 nt2.3□□□□□ -2.04
CTR9P89105 MSH6YDR097C 3729 nt2.29□□□□□ -2.04
CTR9P89105 SFB2YNL049C 2631 nt2.29□□□□□ -2.04
CTR9P89105 YGR109W-BYGR109W-B 4644 nt2.29□□□□□ -2.04
CTR9P89105 YDL206WYDL206W 2289 nt2.28□□□□□ -2.04
CTR9P89105 SOM1YEL059C-A 225 nt2.28□□□□□ -2.04
CTR9P89105 SIR4YDR227W 4077 nt2.27□□□□□ -2.05
CTR9P89105 SEC63YOR254C 1992 nt2.27□□□□□ -2.05
CTR9P89105 YPP1YGR198W 2454 nt2.26□□□□□ -2.05
CTR9P89105 IST2YBR086C 2841 nt2.26□□□□□ -2.05
CTR9P89105 NAB6YML117W 3405 nt2.26□□□□□ -2.05
CTR9P89105 YLL054CYLL054C 2532 nt2.26□□□□□ -2.05
CTR9P89105 UTP21YLR409C 2820 nt2.26□□□□□ -2.05
CTR9P89105 SMC1YFL008W 3678 nt2.26□□□□□ -2.05
CTR9P89105 SPO24YPR036W-A 204 nt2.24□□□□□ -2.05
CTR9P89105 MYO4YAL029C 4416 nt2.24□□□□□ -2.05
CTR9P89105 RSM22YKL155C 1887 nt2.24□□□□□ -2.05
CTR9P89105 SBH1YER087C-B 249 nt2.23□□□□□ -2.05
CTR9P89105 YGL182CYGL182C 324 nt2.23□□□□□ -2.05
CTR9P89105 YKL100W-AYKL100W-A 90 nt2.23□□□□□ -2.05
CTR9P89105 YAL067W-AYAL067W-A 228 nt2.23□□□□□ -2.05
CTR9P89105 YNL067W-BYNL067W-B 141 nt2.23□□□□□ -2.05
CTR9P89105 LHS1YKL073W 2646 nt2.23□□□□□ -2.05
CTR9P89105 YMR045CYMR045C 5268 nt2.22□□□□□ -2.05
CTR9P89105 YLL020CYLL020C 306 nt2.22□□□□□ -2.05
CTR9P89105 YER172C-AYER172C-A 381 nt2.21□□□□□ -2.06
CTR9P89105 YGL123C-AYGL123C-A 231 nt2.21□□□□□ -2.06
CTR9P89105 HIR3YJR140C 4947 nt2.2□□□□□ -2.06
CTR9P89105 HSL1YKL101W 4557 nt2.2□□□□□ -2.06
CTR9P89105 REV3YPL167C 4515 nt2.19□□□□□ -2.06
CTR9P89105 UFD2YDL190C 2886 nt2.19□□□□□ -2.06
CTR9P89105 RAD50YNL250W 3939 nt2.18□□□□□ -2.06
CTR9P89105 TRM3YDL112W 4311 nt2.17□□□□□ -2.06
CTR9P89105 MMS4YBR098W 2076 nt2.16□□□□□ -2.06
CTR9P89105 STF2YGR008C 255 nt2.16□□□□□ -2.06
CTR9P89105 TDA9YML081W 3756 nt2.16□□□□□ -2.06
CTR9P89105 GYP5YPL249C 2685 nt2.15□□□□□ -2.06
CTR9P89105 BFR2YDR299W 1605 nt2.15□□□□□ -2.07
CTR9P89105 RTP1YMR185W 2946 nt2.14□□□□□ -2.07
CTR9P89105 QCR9YGR183C 201 nt2.14□□□□□ -2.07
CTR9P89105 YJR039WYJR039W 3366 nt2.14□□□□□ -2.07
CTR9P89105 SAC3YDR159W 3906 nt2.14□□□□□ -2.07
CTR9P89105 KIP1YBL063W 3336 nt2.14□□□□□ -2.07
CTR9P89105 TBS1YBR150C 3285 nt2.13□□□□□ -2.07
CTR9P89105 YHR214C-BYHR214C-B 5382 nt2.13□□□□□ -2.07
CTR9P89105 YGL041C-BYGL041C-B 183 nt2.12□□□□□ -2.07
CTR9P89105 EMC5YIL027C 426 nt2.12□□□□□ -2.07
CTR9P89105 TMA7YLR262C-A 195 nt2.12□□□□□ -2.07
CTR9P89105 COA6YMR244C-A 315 nt2.12□□□□□ -2.07
CTR9P89105 MDS3YGL197W 4464 nt2.12□□□□□ -2.07
CTR9P89105 COX5BYIL111W 456 nt2.11□□□□□ -2.07
CTR9P89105 YBL039C-AYBL039C-A 84 nt2.11□□□□□ -2.07
CTR9P89105 YMR247W-AYMR247W-A 144 nt2.11□□□□□ -2.07
CTR9P89105 NUT1YGL151W 3399 nt2.11□□□□□ -2.07
CTR9P89105 UBR2YLR024C 5619 nt2.11□□□□□ -2.07
CTR9P89105 PAN2YGL094C 3348 nt2.1□□□□□ -2.07
CTR9P89105 ATG9YDL149W 2994 nt2.1□□□□□ -2.07
CTR9P89105 FAB1YFR019W 6837 nt2.08□□□□□ -2.08
CTR9P89105 MGA2YIR033W 3342 nt2.08□□□□□ -2.08
CTR9P89105 YOR161W-AYOR161W-A 81 nt2.08□□□□□ -2.08
CTR9P89105 YML002WYML002W 2214 nt2.07□□□□□ -2.08
CTR9P89105 ALY2YJL084C 3141 nt2.07□□□□□ -2.08
CTR9P89105 TAH1YCR060W 336 nt2.07□□□□□ -2.08
CTR9P89105 tM(CAU)Q2tM(CAU)Q2 78 nt2.07□□□□□ -2.08
CTR9P89105 PDR8YLR266C 2106 nt2.07□□□□□ -2.08
CTR9P89105 PEP1YBL017C 4740 nt2.06□□□□□ -2.08
CTR9P89105 YAR009CYAR009C 3591 nt2.05□□□□□ -2.08
CTR9P89105 SLX4YLR135W 2247 nt2.05□□□□□ -2.08
CTR9P89105 STB6YKL072W 2301 nt2.05□□□□□ -2.08
CTR9P89105 POL5YEL055C 3069 nt2.04□□□□□ -2.08
CTR9P89105 tT(UGU)HtT(UGU)H 72 nt2.04□□□□□ -2.08
CTR9P89105 EAF1YDR359C 2949 nt2.04□□□□□ -2.08
CTR9P89105 YHR131W-AYHR131W-A 246 nt2.02□□□□□ -2.09
CTR9P89105 MYO2YOR326W 4725 nt2.02□□□□□ -2.09
CTR9P89105 SMC4YLR086W 4257 nt2.02□□□□□ -2.09
CTR9P89105 SEC21YNL287W 2808 nt2.01□□□□□ -2.09
CTR9P89105 snR39BsnR39B 96 nt2□□□□□ -2.09
CTR9P89105 IRC20YLR247C 4671 nt1.99□□□□□ -2.09
CTR9P89105 YLR232WYLR232W 348 nt1.97□□□□□ -2.09
CTR9P89105 BPH1YCR032W 6504 nt1.97□□□□□ -2.09
CTR9P89105 CHS1YNL192W 3396 nt1.96□□□□□ -2.09
CTR9P89105 FYV10YIL097W 1551 nt1.95□□□□□ -2.1
CTR9P89105 snR14snR14 160 nt1.95□□□□□ -2.1
CTR9P89105 YIL142C-AYIL142C-A 333 nt1.94□□□□□ -2.1
CTR9P89105 NOP9YJL010C 2001 nt1.94□□□□□ -2.1
CTR9P89105 SKI3YPR189W 4299 nt1.94□□□□□ -2.1
CTR9P89105 VPS15YBR097W 4365 nt1.93□□□□□ -2.1
CTR9P89105 WAR1YML076C 2835 nt1.93□□□□□ -2.1
CTR9P89105 RPL26BYGR034W 384 nt1.93□□□□□ -2.1
CTR9P89105 YJL127W-AYJL127W-A 117 nt1.93□□□□□ -2.1
CTR9P89105 YMR272W-BYMR272W-B 108 nt1.93□□□□□ -2.1
CTR9P89105 STO1YMR125W 2586 nt1.93□□□□□ -2.1
CTR9P89105 APL3YBL037W 3078 nt1.92□□□□□ -2.1
CTR9P89105 IRA1YBR140C 9279 nt1.92□□□□□ -2.1
CTR9P89105 MEC1YBR136W 7107 nt1.92□□□□□ -2.1
CTR9P89105 CFT1YDR301W 4074 nt1.9□□□□□ -2.1
CTR9P89105 YLR041WYLR041W 321 nt1.9□□□□□ -2.11
CTR9P89105 snR190snR190 190 nt1.9□□□□□ -2.11
CTR9P89105 YOR093CYOR093C 4947 nt1.89□□□□□ -2.11
CTR9P89105 PKH3YDR466W 2697 nt1.89□□□□□ -2.11
Retrieved 100 of 7,029 protein–RNA pairs in 41.1 ms