Protein–RNA interactions for Protein: P53972

RCM1, 25S rRNA (cytosine(2278)-C(5))-methyltransferase, yeastyeast

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RCM1P53972 CFT1YDR301W 4074 nt2.28□□□□□ -2.04
RCM1P53972 STB6YKL072W 2301 nt2.28□□□□□ -2.05
RCM1P53972 YHR180W-AYHR180W-A 183 nt2.27□□□□□ -2.05
RCM1P53972 YPR097WYPR097W 3222 nt2.27□□□□□ -2.05
RCM1P53972 HMI1YOL095C 2121 nt2.27□□□□□ -2.05
RCM1P53972 LHS1YKL073W 2646 nt2.26□□□□□ -2.05
RCM1P53972 APL1YJR005W 2103 nt2.26□□□□□ -2.05
RCM1P53972 YKR075W-AYKR075W-A 270 nt2.26□□□□□ -2.05
RCM1P53972 SIR4YDR227W 4077 nt2.25□□□□□ -2.05
RCM1P53972 YHR131W-AYHR131W-A 246 nt2.25□□□□□ -2.05
RCM1P53972 NUP192YJL039C 5052 nt2.25□□□□□ -2.05
RCM1P53972 PKH2YOL100W 3246 nt2.24□□□□□ -2.05
RCM1P53972 QCR9YGR183C 201 nt2.24□□□□□ -2.05
RCM1P53972 YAL067W-AYAL067W-A 228 nt2.24□□□□□ -2.05
RCM1P53972 MYO4YAL029C 4416 nt2.24□□□□□ -2.05
RCM1P53972 MDS3YGL197W 4464 nt2.24□□□□□ -2.05
RCM1P53972 COG4YPR105C 2586 nt2.23□□□□□ -2.05
RCM1P53972 YMR175W-AYMR175W-A 195 nt2.22□□□□□ -2.05
RCM1P53972 snR39BsnR39B 96 nt2.22□□□□□ -2.05
RCM1P53972 BRR2YER172C 6492 nt2.21□□□□□ -2.06
RCM1P53972 AGC1YPR021C 2709 nt2.21□□□□□ -2.06
RCM1P53972 MGA2YIR033W 3342 nt2.2□□□□□ -2.06
RCM1P53972 snR81snR81 201 nt2.2□□□□□ -2.06
RCM1P53972 YLL020CYLL020C 306 nt2.2□□□□□ -2.06
RCM1P53972 YBL039C-AYBL039C-A 84 nt2.2□□□□□ -2.06
RCM1P53972 SLI15YBR156C 2097 nt2.2□□□□□ -2.06
RCM1P53972 SEC63YOR254C 1992 nt2.19□□□□□ -2.06
RCM1P53972 BUD2YKL092C 3315 nt2.19□□□□□ -2.06
RCM1P53972 USO1YDL058W 5373 nt2.18□□□□□ -2.06
RCM1P53972 BFR2YDR299W 1605 nt2.18□□□□□ -2.06
RCM1P53972 YJR039WYJR039W 3366 nt2.18□□□□□ -2.06
RCM1P53972 SEY1YOR165W 2331 nt2.17□□□□□ -2.06
RCM1P53972 YDL206WYDL206W 2289 nt2.17□□□□□ -2.06
RCM1P53972 YOR343W-BYOR343W-B 5313 nt2.17□□□□□ -2.06
RCM1P53972 CHC1YGL206C 4962 nt2.16□□□□□ -2.06
RCM1P53972 EAF1YDR359C 2949 nt2.16□□□□□ -2.06
RCM1P53972 UFD2YDL190C 2886 nt2.16□□□□□ -2.06
RCM1P53972 POL5YEL055C 3069 nt2.16□□□□□ -2.06
RCM1P53972 UTP8YGR128C 2142 nt2.15□□□□□ -2.06
RCM1P53972 RGA1YOR127W 3024 nt2.15□□□□□ -2.06
RCM1P53972 IST2YBR086C 2841 nt2.15□□□□□ -2.06
RCM1P53972 CTR9YOL145C 3234 nt2.15□□□□□ -2.07
RCM1P53972 RPL37BYDR500C 267 nt2.15□□□□□ -2.07
RCM1P53972 YGL123C-AYGL123C-A 231 nt2.15□□□□□ -2.07
RCM1P53972 TRL1YJL087C 2484 nt2.15□□□□□ -2.07
RCM1P53972 ADR1YDR216W 3972 nt2.14□□□□□ -2.07
RCM1P53972 SYH1YPL105C 2550 nt2.13□□□□□ -2.07
RCM1P53972 HSL1YKL101W 4557 nt2.13□□□□□ -2.07
RCM1P53972 COG6YNL041C 2520 nt2.13□□□□□ -2.07
RCM1P53972 RTP1YMR185W 2946 nt2.12□□□□□ -2.07
RCM1P53972 YOR161W-AYOR161W-A 81 nt2.11□□□□□ -2.07
RCM1P53972 CAT8YMR280C 4302 nt2.11□□□□□ -2.07
RCM1P53972 FRK1YPL141C 2598 nt2.1□□□□□ -2.07
RCM1P53972 TAH1YCR060W 336 nt2.1□□□□□ -2.07
RCM1P53972 CDC60YPL160W 3273 nt2.09□□□□□ -2.07
RCM1P53972 snR62snR62 100 nt2.09□□□□□ -2.07
RCM1P53972 YAL037C-AYAL037C-A 93 nt2.09□□□□□ -2.07
RCM1P53972 HIR3YJR140C 4947 nt2.09□□□□□ -2.07
RCM1P53972 RTT101YJL047C 2529 nt2.08□□□□□ -2.08
RCM1P53972 COX5BYIL111W 456 nt2.07□□□□□ -2.08
RCM1P53972 NUP157YER105C 4176 nt2.06□□□□□ -2.08
RCM1P53972 IRE1YHR079C 3348 nt2.06□□□□□ -2.08
RCM1P53972 tM(CAU)Q2tM(CAU)Q2 78 nt2.06□□□□□ -2.08
RCM1P53972 YKL100W-AYKL100W-A 90 nt2.06□□□□□ -2.08
RCM1P53972 TBS1YBR150C 3285 nt2.06□□□□□ -2.08
RCM1P53972 PET309YLR067C 2898 nt2.06□□□□□ -2.08
RCM1P53972 SAC3YDR159W 3906 nt2.06□□□□□ -2.08
RCM1P53972 YOR093CYOR093C 4947 nt2.06□□□□□ -2.08
RCM1P53972 HUG1YML058W-A 207 nt2.04□□□□□ -2.08
RCM1P53972 SPO24YPR036W-A 204 nt2.04□□□□□ -2.08
RCM1P53972 PDR8YLR266C 2106 nt2.03□□□□□ -2.08
RCM1P53972 RSM22YKL155C 1887 nt2.03□□□□□ -2.08
RCM1P53972 KAP120YPL125W 3099 nt2.03□□□□□ -2.08
RCM1P53972 CHS1YNL192W 3396 nt2.02□□□□□ -2.09
RCM1P53972 NUT1YGL151W 3399 nt2.02□□□□□ -2.09
RCM1P53972 YDR210WYDR210W 228 nt2.02□□□□□ -2.09
RCM1P53972 YBR072C-AYBR072C-A 162 nt2.01□□□□□ -2.09
RCM1P53972 GCN2YDR283C 4980 nt2.01□□□□□ -2.09
RCM1P53972 BIR1YJR089W 2865 nt2□□□□□ -2.09
RCM1P53972 YMR045CYMR045C 5268 nt2□□□□□ -2.09
RCM1P53972 YNL266WYNL266W 420 nt2□□□□□ -2.09
RCM1P53972 TDA9YML081W 3756 nt2□□□□□ -2.09
RCM1P53972 ALY2YJL084C 3141 nt2□□□□□ -2.09
RCM1P53972 SLX4YLR135W 2247 nt1.98□□□□□ -2.09
RCM1P53972 PAN2YGL094C 3348 nt1.98□□□□□ -2.09
RCM1P53972 YLR419WYLR419W 4308 nt1.98□□□□□ -2.09
RCM1P53972 ATG9YDL149W 2994 nt1.98□□□□□ -2.09
RCM1P53972 YJL127W-AYJL127W-A 117 nt1.97□□□□□ -2.09
RCM1P53972 YML002WYML002W 2214 nt1.97□□□□□ -2.09
RCM1P53972 SEC1YDR164C 2175 nt1.96□□□□□ -2.1
RCM1P53972 YLR041WYLR041W 321 nt1.96□□□□□ -2.1
RCM1P53972 DNF3YMR162C 4971 nt1.96□□□□□ -2.1
RCM1P53972 YOL083C-AYOL083C-A 141 nt1.95□□□□□ -2.1
RCM1P53972 UTP21YLR409C 2820 nt1.95□□□□□ -2.1
RCM1P53972 MSH3YCR092C 3057 nt1.94□□□□□ -2.1
RCM1P53972 YHR214C-BYHR214C-B 5382 nt1.94□□□□□ -2.1
RCM1P53972 SEC21YNL287W 2808 nt1.93□□□□□ -2.1
RCM1P53972 YAR009CYAR009C 3591 nt1.92□□□□□ -2.1
RCM1P53972 YGR130CYGR130C 2451 nt1.92□□□□□ -2.1
RCM1P53972 YLR232WYLR232W 348 nt1.92□□□□□ -2.1
Retrieved 100 of 7,029 protein–RNA pairs in 98 ms