Protein–RNA interactions for Protein: P53882

TDA7, Topoisomerase I damage affected protein 7, yeastyeast

Predicted RBP Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA7P53882 tH(GUG)MtH(GUG)M 72 nt1.33□□□□□ -2.2
TDA7P53882 YLL019W-AYLL019W-A 93 nt1.33□□□□□ -2.2
TDA7P53882 YNL097C-BYNL097C-B 123 nt1.33□□□□□ -2.2
TDA7P53882 TRM732YMR259C 4263 nt1.33□□□□□ -2.2
TDA7P53882 YLL054CYLL054C 2532 nt1.32□□□□□ -2.2
TDA7P53882 SLD3YGL113W 2007 nt1.32□□□□□ -2.2
TDA7P53882 MMS4YBR098W 2076 nt1.32□□□□□ -2.2
TDA7P53882 PAN2YGL094C 3348 nt1.32□□□□□ -2.2
TDA7P53882 YBR131C-AYBR131C-A 90 nt1.31□□□□□ -2.2
TDA7P53882 BST1YFL025C 3090 nt1.31□□□□□ -2.2
TDA7P53882 AIM44YPL158C 2277 nt1.31□□□□□ -2.2
TDA7P53882 YDL196WYDL196W 330 nt1.3□□□□□ -2.2
TDA7P53882 YDR354C-AYDR354C-A 144 nt1.3□□□□□ -2.2
TDA7P53882 YOR019WYOR019W 2193 nt1.3□□□□□ -2.2
TDA7P53882 YEL014CYEL014C 306 nt1.29□□□□□ -2.2
TDA7P53882 YOR225WYOR225W 330 nt1.29□□□□□ -2.2
TDA7P53882 YLR422WYLR422W 5799 nt1.28□□□□□ -2.2
TDA7P53882 FIG4YNL325C 2640 nt1.28□□□□□ -2.2
TDA7P53882 ULI1YFR026C 510 nt1.28□□□□□ -2.2
TDA7P53882 YNL198CYNL198C 303 nt1.28□□□□□ -2.2
TDA7P53882 YOR161W-BYOR161W-B 261 nt1.28□□□□□ -2.2
TDA7P53882 YJL026C-AYJL026C-A 222 nt1.27□□□□□ -2.21
TDA7P53882 YOR345CYOR345C 351 nt1.27□□□□□ -2.21
TDA7P53882 SET3YKR029C 2256 nt1.27□□□□□ -2.21
TDA7P53882 SWI4YER111C 3282 nt1.26□□□□□ -2.21
TDA7P53882 POL5YEL055C 3069 nt1.26□□□□□ -2.21
TDA7P53882 YGL007C-AYGL007C-A 87 nt1.26□□□□□ -2.21
TDA7P53882 CDC25YLR310C 4770 nt1.25□□□□□ -2.21
TDA7P53882 Q0032Q0032 291 nt1.25□□□□□ -2.21
TDA7P53882 STO1YMR125W 2586 nt1.25□□□□□ -2.21
TDA7P53882 APL3YBL037W 3078 nt1.24□□□□□ -2.21
TDA7P53882 tV(UAC)BtV(UAC)B 74 nt1.24□□□□□ -2.21
TDA7P53882 tV(UAC)DtV(UAC)D 74 nt1.24□□□□□ -2.21
TDA7P53882 CLU1YMR012W 3834 nt1.24□□□□□ -2.21
TDA7P53882 YBR221W-AYBR221W-A 105 nt1.24□□□□□ -2.21
TDA7P53882 NUP188YML103C 4968 nt1.24□□□□□ -2.21
TDA7P53882 EST2YLR318W 2655 nt1.23□□□□□ -2.21
TDA7P53882 YJL150WYJL150W 303 nt1.23□□□□□ -2.21
TDA7P53882 YJL182CYJL182C 318 nt1.23□□□□□ -2.21
TDA7P53882 snR46snR46 197 nt1.23□□□□□ -2.21
TDA7P53882 YLR466C-BYLR466C-B 117 nt1.22□□□□□ -2.21
TDA7P53882 APL1YJR005W 2103 nt1.22□□□□□ -2.21
TDA7P53882 AZF1YOR113W 2745 nt1.22□□□□□ -2.21
TDA7P53882 SIP4YJL089W 2490 nt1.22□□□□□ -2.21
TDA7P53882 HAL9YOL089C 3093 nt1.21□□□□□ -2.22
TDA7P53882 PAA1YDR071C 576 nt1.21□□□□□ -2.22
TDA7P53882 YNL211CYNL211C 261 nt1.21□□□□□ -2.22
TDA7P53882 YPR117WYPR117W 7470 nt1.2□□□□□ -2.22
TDA7P53882 tQ(UUG)E2tQ(UUG)E2 72 nt1.2□□□□□ -2.22
TDA7P53882 YAL067W-AYAL067W-A 228 nt1.2□□□□□ -2.22
TDA7P53882 RPL33BYOR234C 324 nt1.2□□□□□ -2.22
TDA7P53882 NUP145YGL092W 3954 nt1.19□□□□□ -2.22
TDA7P53882 YGR151CYGR151C 336 nt1.19□□□□□ -2.22
TDA7P53882 YIL134C-AYIL134C-A 204 nt1.19□□□□□ -2.22
TDA7P53882 RPS30BYOR182C 192 nt1.19□□□□□ -2.22
TDA7P53882 FYV8YGR196C 2454 nt1.18□□□□□ -2.22
TDA7P53882 COY1YKL179C 2040 nt1.18□□□□□ -2.22
TDA7P53882 WAR1YML076C 2835 nt1.18□□□□□ -2.22
TDA7P53882 PET127YOR017W 2403 nt1.18□□□□□ -2.22
TDA7P53882 MSN5YDR335W 3675 nt1.17□□□□□ -2.22
TDA7P53882 CDC39YCR093W 6327 nt1.17□□□□□ -2.22
TDA7P53882 YLL020CYLL020C 306 nt1.17□□□□□ -2.22
TDA7P53882 COX12YLR038C 252 nt1.17□□□□□ -2.22
TDA7P53882 YBR200W-AYBR200W-A 165 nt1.17□□□□□ -2.22
TDA7P53882 snR52snR52 92 nt1.17□□□□□ -2.22
TDA7P53882 UBP3YER151C 2739 nt1.17□□□□□ -2.22
TDA7P53882 SMC1YFL008W 3678 nt1.17□□□□□ -2.22
TDA7P53882 PRP39YML046W 1890 nt1.16□□□□□ -2.22
TDA7P53882 CMC4YMR194C-B 222 nt1.16□□□□□ -2.22
TDA7P53882 SPC110YDR356W 2835 nt1.15□□□□□ -2.23
TDA7P53882 PAU12YGR294W 363 nt1.15□□□□□ -2.23
TDA7P53882 YLR342W-AYLR342W-A 174 nt1.15□□□□□ -2.23
TDA7P53882 PAU24YBR301W 363 nt1.15□□□□□ -2.23
TDA7P53882 RSM22YKL155C 1887 nt1.15□□□□□ -2.23
TDA7P53882 EAF1YDR359C 2949 nt1.15□□□□□ -2.23
TDA7P53882 NOP9YJL010C 2001 nt1.15□□□□□ -2.23
TDA7P53882 SEC3YER008C 4011 nt1.14□□□□□ -2.23
TDA7P53882 STB6YKL072W 2301 nt1.14□□□□□ -2.23
TDA7P53882 PMP1YCR024C-A 123 nt1.13□□□□□ -2.23
TDA7P53882 SEC21YNL287W 2808 nt1.13□□□□□ -2.23
TDA7P53882 GEA2YEL022W 4380 nt1.12□□□□□ -2.23
TDA7P53882 NUP157YER105C 4176 nt1.12□□□□□ -2.23
TDA7P53882 YCR038W-AYCR038W-A 126 nt1.12□□□□□ -2.23
TDA7P53882 YLR294CYLR294C 330 nt1.12□□□□□ -2.23
TDA7P53882 TRS65YGR166W 1683 nt1.12□□□□□ -2.23
TDA7P53882 ROM2YLR371W 4071 nt1.11□□□□□ -2.23
TDA7P53882 ASE1YOR058C 2658 nt1.1□□□□□ -2.23
TDA7P53882 YEL073CYEL073C 324 nt1.1□□□□□ -2.23
TDA7P53882 YGL123C-AYGL123C-A 231 nt1.1□□□□□ -2.23
TDA7P53882 YIL002W-AYIL002W-A 210 nt1.1□□□□□ -2.23
TDA7P53882 YPL044CYPL044C 549 nt1.1□□□□□ -2.23
TDA7P53882 YFR012W-AYFR012W-A 87 nt1.09□□□□□ -2.23
TDA7P53882 YNL338WYNL338W 159 nt1.09□□□□□ -2.23
TDA7P53882 SPT7YBR081C 3999 nt1.08□□□□□ -2.24
TDA7P53882 YOR161W-AYOR161W-A 81 nt1.08□□□□□ -2.24
TDA7P53882 HKR1YDR420W 5409 nt1.07□□□□□ -2.24
TDA7P53882 RPL26BYGR034W 384 nt1.07□□□□□ -2.24
TDA7P53882 KAP120YPL125W 3099 nt1.07□□□□□ -2.24
TDA7P53882 YER053C-AYER053C-A 114 nt1.06□□□□□ -2.24
TDA7P53882 COX5BYIL111W 456 nt1.06□□□□□ -2.24
Retrieved 100 of 7,029 protein–RNA pairs in 50.1 ms