Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CXCL12P48061 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CXCL12P48061 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
CXCL12P48061 TSPY14P-201ENST00000303979 915 ntBASIC20.04■□□□□ 0.8
CXCL12P48061 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CXCL12P48061 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC20.04■□□□□ 0.8
CXCL12P48061 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CXCL12P48061 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CXCL12P48061 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.04■□□□□ 0.8
CXCL12P48061 AC128688.1-201ENST00000487626 519 ntBASIC20.04■□□□□ 0.8
CXCL12P48061 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.04■□□□□ 0.8
CXCL12P48061 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.04■□□□□ 0.8
CXCL12P48061 LINC01238-205ENST00000567549 1107 ntBASIC20.04■□□□□ 0.8
CXCL12P48061 AC026271.3-201ENST00000571884 352 ntBASIC20.04■□□□□ 0.8
CXCL12P48061 AP005242.2-201ENST00000580065 1175 ntBASIC20.04■□□□□ 0.8
CXCL12P48061 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CXCL12P48061 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.04■□□□□ 0.8
CXCL12P48061 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CXCL12P48061 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CXCL12P48061 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CXCL12P48061 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CXCL12P48061 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CXCL12P48061 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CXCL12P48061 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CXCL12P48061 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
CXCL12P48061 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CXCL12P48061 KRT8P20-201ENST00000423953 1409 ntBASIC20.03■□□□□ 0.8
CXCL12P48061 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.03■□□□□ 0.8
CXCL12P48061 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CXCL12P48061 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CXCL12P48061 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CXCL12P48061 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
CXCL12P48061 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CXCL12P48061 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CXCL12P48061 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.03■□□□□ 0.8
CXCL12P48061 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.03■□□□□ 0.8
CXCL12P48061 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.03■□□□□ 0.8
CXCL12P48061 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.03■□□□□ 0.8
CXCL12P48061 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CXCL12P48061 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CXCL12P48061 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.03■□□□□ 0.8
CXCL12P48061 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CXCL12P48061 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CXCL12P48061 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC20.02■□□□□ 0.8
CXCL12P48061 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.02■□□□□ 0.8
CXCL12P48061 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CXCL12P48061 MESTP1-201ENST00000404287 994 ntBASIC20.02■□□□□ 0.8
CXCL12P48061 AK4P3-201ENST00000418260 669 ntBASIC20.02■□□□□ 0.8
CXCL12P48061 BX664615.1-201ENST00000443558 458 ntBASIC20.02■□□□□ 0.8
CXCL12P48061 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.02■□□□□ 0.8
CXCL12P48061 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC20.02■□□□□ 0.8
CXCL12P48061 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC20.02■□□□□ 0.8
CXCL12P48061 DGCR10-201ENST00000609839 495 ntBASIC20.02■□□□□ 0.8
CXCL12P48061 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.02■□□□□ 0.8
CXCL12P48061 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.02■□□□□ 0.8
CXCL12P48061 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.02■□□□□ 0.8
CXCL12P48061 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CXCL12P48061 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CXCL12P48061 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
CXCL12P48061 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CXCL12P48061 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CXCL12P48061 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CXCL12P48061 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.02■□□□□ 0.79
CXCL12P48061 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CXCL12P48061 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CXCL12P48061 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CXCL12P48061 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CXCL12P48061 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CXCL12P48061 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CXCL12P48061 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CXCL12P48061 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.01■□□□□ 0.79
CXCL12P48061 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CXCL12P48061 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
CXCL12P48061 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
CXCL12P48061 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CXCL12P48061 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.01■□□□□ 0.79
CXCL12P48061 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC20.01■□□□□ 0.79
CXCL12P48061 USF2-205ENST00000594064 1179 ntTSL 2 BASIC20.01■□□□□ 0.79
CXCL12P48061 AC091076.1-201ENST00000610741 619 ntBASIC20.01■□□□□ 0.79
CXCL12P48061 AL445675.2-201ENST00000620291 557 ntBASIC20.01■□□□□ 0.79
CXCL12P48061 PTBP1P-201ENST00000554374 1601 ntBASIC20.01■□□□□ 0.79
CXCL12P48061 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CXCL12P48061 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.01■□□□□ 0.79
CXCL12P48061 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
CXCL12P48061 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20■□□□□ 0.79
CXCL12P48061 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20■□□□□ 0.79
CXCL12P48061 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CXCL12P48061 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CXCL12P48061 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CXCL12P48061 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20■□□□□ 0.79
CXCL12P48061 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC20■□□□□ 0.79
CXCL12P48061 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20■□□□□ 0.79
CXCL12P48061 UPK3BP1-201ENST00000428678 509 ntBASIC20■□□□□ 0.79
CXCL12P48061 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC20■□□□□ 0.79
CXCL12P48061 AC097488.1-201ENST00000507834 756 ntBASIC20■□□□□ 0.79
CXCL12P48061 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
CXCL12P48061 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CXCL12P48061 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20■□□□□ 0.79
CXCL12P48061 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20■□□□□ 0.79
CXCL12P48061 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms