Protein–RNA interactions for Protein: P47175

HMS2, Probable transcription factor HMS2, yeastyeast

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HMS2P47175 ECM12YHR021W-A 456 nt1.01□□□□□ -2.25
HMS2P47175 YEL020C-BYEL020C-B 198 nt1□□□□□ -2.25
HMS2P47175 MCM10YIL150C 1716 nt0.99□□□□□ -2.25
HMS2P47175 YMR172C-AYMR172C-A 384 nt0.99□□□□□ -2.25
HMS2P47175 SIP4YJL089W 2490 nt0.99□□□□□ -2.25
HMS2P47175 SCC2YDR180W 4482 nt0.98□□□□□ -2.25
HMS2P47175 YER181CYER181C 324 nt0.98□□□□□ -2.25
HMS2P47175 SGF11YPL047W 300 nt0.98□□□□□ -2.25
HMS2P47175 NOP9YJL010C 2001 nt0.98□□□□□ -2.25
HMS2P47175 tV(UAC)BtV(UAC)B 74 nt0.97□□□□□ -2.25
HMS2P47175 tV(UAC)DtV(UAC)D 74 nt0.97□□□□□ -2.25
HMS2P47175 YJL197C-AYJL197C-A 282 nt0.97□□□□□ -2.25
HMS2P47175 CMC4YMR194C-B 222 nt0.97□□□□□ -2.25
HMS2P47175 YGR130CYGR130C 2451 nt0.97□□□□□ -2.25
HMS2P47175 SMC1YFL008W 3678 nt0.97□□□□□ -2.25
HMS2P47175 YJR029WYJR029W 5268 nt0.97□□□□□ -2.25
HMS2P47175 YPR137C-BYPR137C-B 5268 nt0.97□□□□□ -2.25
HMS2P47175 APL1YJR005W 2103 nt0.97□□□□□ -2.25
HMS2P47175 IML1YJR138W 4755 nt0.96□□□□□ -2.26
HMS2P47175 TTI1YKL033W 3117 nt0.96□□□□□ -2.26
HMS2P47175 ISD11YER048W-A 285 nt0.96□□□□□ -2.26
HMS2P47175 YGL052WYGL052W 306 nt0.96□□□□□ -2.26
HMS2P47175 YNL211CYNL211C 261 nt0.96□□□□□ -2.26
HMS2P47175 GEA2YEL022W 4380 nt0.96□□□□□ -2.26
HMS2P47175 YDL196WYDL196W 330 nt0.95□□□□□ -2.26
HMS2P47175 PAA1YDR071C 576 nt0.95□□□□□ -2.26
HMS2P47175 YPL044CYPL044C 549 nt0.95□□□□□ -2.26
HMS2P47175 YPL152W-AYPL152W-A 99 nt0.94□□□□□ -2.26
HMS2P47175 YDR354C-AYDR354C-A 144 nt0.93□□□□□ -2.26
HMS2P47175 YJL026C-AYJL026C-A 222 nt0.93□□□□□ -2.26
HMS2P47175 YPR092WYPR092W 306 nt0.93□□□□□ -2.26
HMS2P47175 ASE1YOR058C 2658 nt0.93□□□□□ -2.26
HMS2P47175 YDL073WYDL073W 2955 nt0.92□□□□□ -2.26
HMS2P47175 YOR282WYOR282W 321 nt0.92□□□□□ -2.26
HMS2P47175 PRP16YKR086W 3216 nt0.91□□□□□ -2.26
HMS2P47175 YAL067W-AYAL067W-A 228 nt0.91□□□□□ -2.26
HMS2P47175 YML099W-AYML099W-A 330 nt0.91□□□□□ -2.26
HMS2P47175 DOP1YDR141C 5097 nt0.91□□□□□ -2.26
HMS2P47175 YPR117WYPR117W 7470 nt0.89□□□□□ -2.27
HMS2P47175 PMP1YCR024C-A 123 nt0.89□□□□□ -2.27
HMS2P47175 YFR012W-AYFR012W-A 87 nt0.89□□□□□ -2.27
HMS2P47175 RPL26BYGR034W 384 nt0.89□□□□□ -2.27
HMS2P47175 YLL019W-AYLL019W-A 93 nt0.89□□□□□ -2.27
HMS2P47175 snR74snR74 88 nt0.88□□□□□ -2.27
HMS2P47175 EMT1tM(CAU)D 73 nt0.88□□□□□ -2.27
HMS2P47175 EMT5tM(CAU)J1 73 nt0.88□□□□□ -2.27
HMS2P47175 EMT3tM(CAU)J2 73 nt0.88□□□□□ -2.27
HMS2P47175 EMT4tM(CAU)M 73 nt0.88□□□□□ -2.27
HMS2P47175 EMT2tM(CAU)O2 73 nt0.88□□□□□ -2.27
HMS2P47175 YOR072W-BYOR072W-B 162 nt0.88□□□□□ -2.27
HMS2P47175 snR49snR49 165 nt0.88□□□□□ -2.27
HMS2P47175 BFR2YDR299W 1605 nt0.88□□□□□ -2.27
HMS2P47175 YDL185C-AYDL185C-A 228 nt0.86□□□□□ -2.27
HMS2P47175 YHR063W-AYHR063W-A 336 nt0.86□□□□□ -2.27
HMS2P47175 YMR307C-AYMR307C-A 195 nt0.86□□□□□ -2.27
HMS2P47175 tF(GAA)QtF(GAA)Q 75 nt0.85□□□□□ -2.27
HMS2P47175 PAU24YBR301W 363 nt0.85□□□□□ -2.27
HMS2P47175 BUD3YCL014W 4911 nt0.83□□□□□ -2.28
HMS2P47175 YCR018C-AYCR018C-A 255 nt0.82□□□□□ -2.28
HMS2P47175 YIR030W-AYIR030W-A 384 nt0.82□□□□□ -2.28
HMS2P47175 SEC8YPR055W 3198 nt0.82□□□□□ -2.28
HMS2P47175 snR55snR55 98 nt0.81□□□□□ -2.28
HMS2P47175 YCR022CYCR022C 345 nt0.8□□□□□ -2.28
HMS2P47175 YGL188C-AYGL188C-A 141 nt0.8□□□□□ -2.28
HMS2P47175 YOL155W-AYOL155W-A 135 nt0.8□□□□□ -2.28
HMS2P47175 snR190snR190 190 nt0.8□□□□□ -2.28
HMS2P47175 RKR1YMR247C 4689 nt0.79□□□□□ -2.28
HMS2P47175 YPR160W-AYPR160W-A 81 nt0.79□□□□□ -2.28
HMS2P47175 YBR182C-AYBR182C-A 195 nt0.79□□□□□ -2.28
HMS2P47175 YKU70YMR284W 1809 nt0.78□□□□□ -2.28
HMS2P47175 COY1YKL179C 2040 nt0.78□□□□□ -2.28
HMS2P47175 YLR282CYLR282C 342 nt0.78□□□□□ -2.28
HMS2P47175 HAL9YOL089C 3093 nt0.78□□□□□ -2.28
HMS2P47175 YLR399W-AYLR399W-A 105 nt0.77□□□□□ -2.29
HMS2P47175 ABF2YMR072W 552 nt0.77□□□□□ -2.29
HMS2P47175 NPR2YEL062W 1848 nt0.77□□□□□ -2.29
HMS2P47175 YGL041CYGL041C 204 nt0.76□□□□□ -2.29
HMS2P47175 YGL123C-AYGL123C-A 231 nt0.76□□□□□ -2.29
HMS2P47175 COX5BYIL111W 456 nt0.76□□□□□ -2.29
HMS2P47175 CHS6YJL099W 2241 nt0.76□□□□□ -2.29
HMS2P47175 COX12YLR038C 252 nt0.75□□□□□ -2.29
HMS2P47175 RPS30BYOR182C 192 nt0.75□□□□□ -2.29
HMS2P47175 PRP5YBR237W 2550 nt0.74□□□□□ -2.29
HMS2P47175 snR8snR8 190 nt0.74□□□□□ -2.29
HMS2P47175 BLI1YKL061W 342 nt0.74□□□□□ -2.29
HMS2P47175 YOR161W-AYOR161W-A 81 nt0.74□□□□□ -2.29
HMS2P47175 FYV10YIL097W 1551 nt0.74□□□□□ -2.29
HMS2P47175 YIL134C-AYIL134C-A 204 nt0.73□□□□□ -2.29
HMS2P47175 YKL100W-AYKL100W-A 90 nt0.73□□□□□ -2.29
HMS2P47175 SEC1YDR164C 2175 nt0.73□□□□□ -2.29
HMS2P47175 ULI1YFR026C 510 nt0.72□□□□□ -2.29
HMS2P47175 YML002WYML002W 2214 nt0.71□□□□□ -2.3
HMS2P47175 PAM16YJL104W 450 nt0.71□□□□□ -2.3
HMS2P47175 YLR041WYLR041W 321 nt0.71□□□□□ -2.3
HMS2P47175 snR80snR80 171 nt0.7□□□□□ -2.3
HMS2P47175 YOR345CYOR345C 351 nt0.7□□□□□ -2.3
HMS2P47175 YDR366CYDR366C 399 nt0.69□□□□□ -2.3
HMS2P47175 YOR302WYOR302W 78 nt0.69□□□□□ -2.3
HMS2P47175 LTE1YAL024C 4308 nt0.69□□□□□ -2.3
HMS2P47175 OST4YDL232W 111 nt0.68□□□□□ -2.3
Retrieved 100 of 7,029 protein–RNA pairs in 15.3 ms