Protein–RNA interactions for Protein: P42839

VNX1, Low affinity vacuolar monovalent cation/H(+) antiporter, yeastyeast

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VNX1P42839 CIN8YEL061C 3003 nt2.95□□□□□ -1.94
VNX1P42839 AUS1YOR011W 4185 nt2.95□□□□□ -1.94
VNX1P42839 YGR067CYGR067C 2415 nt2.94□□□□□ -1.94
VNX1P42839 snR69snR69 101 nt2.94□□□□□ -1.94
VNX1P42839 YPR160W-AYPR160W-A 81 nt2.93□□□□□ -1.94
VNX1P42839 BMS1YPL217C 3552 nt2.92□□□□□ -1.94
VNX1P42839 snR190snR190 190 nt2.92□□□□□ -1.94
VNX1P42839 RTT101YJL047C 2529 nt2.91□□□□□ -1.94
VNX1P42839 PKH3YDR466W 2697 nt2.9□□□□□ -1.94
VNX1P42839 SPO71YDR104C 3738 nt2.9□□□□□ -1.94
VNX1P42839 RSE1YML049C 4086 nt2.9□□□□□ -1.95
VNX1P42839 YDL114W-AYDL114W-A 114 nt2.9□□□□□ -1.95
VNX1P42839 TRL1YJL087C 2484 nt2.9□□□□□ -1.95
VNX1P42839 BUL2YML111W 2763 nt2.89□□□□□ -1.95
VNX1P42839 PDR1YGL013C 3207 nt2.89□□□□□ -1.95
VNX1P42839 SAC3YDR159W 3906 nt2.88□□□□□ -1.95
VNX1P42839 PMR1YGL167C 2853 nt2.88□□□□□ -1.95
VNX1P42839 GCN1YGL195W 8019 nt2.87□□□□□ -1.95
VNX1P42839 TAO3YIL129C 7131 nt2.87□□□□□ -1.95
VNX1P42839 POL2YNL262W 6669 nt2.87□□□□□ -1.95
VNX1P42839 NAB6YML117W 3405 nt2.87□□□□□ -1.95
VNX1P42839 CBF2YGR140W 2871 nt2.86□□□□□ -1.95
VNX1P42839 YEF3YLR249W 3135 nt2.86□□□□□ -1.95
VNX1P42839 VPS8YAL002W 3825 nt2.86□□□□□ -1.95
VNX1P42839 DGR1YNL130C-A 147 nt2.86□□□□□ -1.95
VNX1P42839 SSN2YDR443C 4263 nt2.86□□□□□ -1.95
VNX1P42839 TFC3YAL001C 3483 nt2.85□□□□□ -1.95
VNX1P42839 SYH1YPL105C 2550 nt2.85□□□□□ -1.95
VNX1P42839 TOF1YNL273W 3717 nt2.84□□□□□ -1.96
VNX1P42839 NUP100YKL068W 2880 nt2.83□□□□□ -1.96
VNX1P42839 tQ(UUG)BtQ(UUG)B 72 nt2.83□□□□□ -1.96
VNX1P42839 ECM21YBL101C 3354 nt2.83□□□□□ -1.96
VNX1P42839 YIL082W-AYIL082W-A 4497 nt2.83□□□□□ -1.96
VNX1P42839 BPT1YLL015W 4680 nt2.82□□□□□ -1.96
VNX1P42839 ROM2YLR371W 4071 nt2.82□□□□□ -1.96
VNX1P42839 GYP5YPL249C 2685 nt2.82□□□□□ -1.96
VNX1P42839 PAN2YGL094C 3348 nt2.81□□□□□ -1.96
VNX1P42839 STO1YMR125W 2586 nt2.81□□□□□ -1.96
VNX1P42839 CTR9YOL145C 3234 nt2.8□□□□□ -1.96
VNX1P42839 SXM1YDR395W 2835 nt2.8□□□□□ -1.96
VNX1P42839 INP51YIL002C 2841 nt2.8□□□□□ -1.96
VNX1P42839 NMD2YHR077C 3270 nt2.79□□□□□ -1.96
VNX1P42839 RPN1YHR027C 2982 nt2.79□□□□□ -1.96
VNX1P42839 CSE1YGL238W 2883 nt2.79□□□□□ -1.96
VNX1P42839 TCB2YNL087W 3537 nt2.77□□□□□ -1.97
VNX1P42839 CSR2YPR030W 3366 nt2.77□□□□□ -1.97
VNX1P42839 NST1YNL091W 3723 nt2.77□□□□□ -1.97
VNX1P42839 FLO1YAR050W 4614 nt2.77□□□□□ -1.97
VNX1P42839 tV(UAC)QtV(UAC)Q 76 nt2.76□□□□□ -1.97
VNX1P42839 FLO5YHR211W 3228 nt2.76□□□□□ -1.97
VNX1P42839 RGC1YPR115W 3252 nt2.75□□□□□ -1.97
VNX1P42839 YAR009CYAR009C 3591 nt2.75□□□□□ -1.97
VNX1P42839 YSP2YDR326C 4317 nt2.74□□□□□ -1.97
VNX1P42839 DRS2YAL026C 4068 nt2.73□□□□□ -1.97
VNX1P42839 SIR4YDR227W 4077 nt2.73□□□□□ -1.97
VNX1P42839 YIL169CYIL169C 2988 nt2.73□□□□□ -1.97
VNX1P42839 IRE1YHR079C 3348 nt2.71□□□□□ -1.97
VNX1P42839 MSB1YOR188W 3414 nt2.71□□□□□ -1.98
VNX1P42839 SEC8YPR055W 3198 nt2.7□□□□□ -1.98
VNX1P42839 SPO14YKR031C 5052 nt2.7□□□□□ -1.98
VNX1P42839 SNQ2YDR011W 4506 nt2.69□□□□□ -1.98
VNX1P42839 DYN1YKR054C 12279 nt2.69□□□□□ -1.98
VNX1P42839 snR70snR70 164 nt2.68□□□□□ -1.98
VNX1P42839 MET18YIL128W 3099 nt2.67□□□□□ -1.98
VNX1P42839 ESL1YIL151C 3357 nt2.67□□□□□ -1.98
VNX1P42839 YOR343W-BYOR343W-B 5313 nt2.66□□□□□ -1.98
VNX1P42839 GEA1YJR031C 4227 nt2.66□□□□□ -1.98
VNX1P42839 YPL216WYPL216W 3309 nt2.65□□□□□ -1.98
VNX1P42839 ULP2YIL031W 3105 nt2.65□□□□□ -1.98
VNX1P42839 NUT1YGL151W 3399 nt2.65□□□□□ -1.99
VNX1P42839 AMS1YGL156W 3252 nt2.65□□□□□ -1.99
VNX1P42839 YPL060C-AYPL060C-A 3315 nt2.65□□□□□ -1.99
VNX1P42839 YJL052C-AYJL052C-A 120 nt2.64□□□□□ -1.99
VNX1P42839 PRP8YHR165C 7242 nt2.64□□□□□ -1.99
VNX1P42839 PRP16YKR086W 3216 nt2.63□□□□□ -1.99
VNX1P42839 PAU12YGR294W 363 nt2.63□□□□□ -1.99
VNX1P42839 ILS1YBL076C 3219 nt2.62□□□□□ -1.99
VNX1P42839 YMR160WYMR160W 2451 nt2.62□□□□□ -1.99
VNX1P42839 CAT8YMR280C 4302 nt2.61□□□□□ -1.99
VNX1P42839 YBL005W-BYBL005W-B 5268 nt2.61□□□□□ -1.99
VNX1P42839 MSB2YGR014W 3921 nt2.61□□□□□ -1.99
VNX1P42839 HSL1YKL101W 4557 nt2.6□□□□□ -1.99
VNX1P42839 YJL077W-AYJL077W-A 87 nt2.6□□□□□ -1.99
VNX1P42839 HUG1YML058W-A 207 nt2.6□□□□□ -1.99
VNX1P42839 MSH6YDR097C 3729 nt2.6□□□□□ -1.99
VNX1P42839 KIP1YBL063W 3336 nt2.6□□□□□ -1.99
VNX1P42839 YOR296WYOR296W 3870 nt2.59□□□□□ -1.99
VNX1P42839 SLH1YGR271W 5904 nt2.59□□□□□ -2
VNX1P42839 SEC3YER008C 4011 nt2.59□□□□□ -2
VNX1P42839 TUS1YLR425W 3924 nt2.59□□□□□ -2
VNX1P42839 TOM1YDR457W 9807 nt2.59□□□□□ -2
VNX1P42839 CHC1YGL206C 4962 nt2.57□□□□□ -2
VNX1P42839 MOT1YPL082C 5604 nt2.56□□□□□ -2
VNX1P42839 YSP1YHR155W 3687 nt2.56□□□□□ -2
VNX1P42839 tN(GUU)QtN(GUU)Q 71 nt2.56□□□□□ -2
VNX1P42839 YDR098C-BYDR098C-B 5268 nt2.56□□□□□ -2
VNX1P42839 YDR210C-DYDR210C-D 5268 nt2.56□□□□□ -2
VNX1P42839 YDR316W-BYDR316W-B 5268 nt2.56□□□□□ -2
VNX1P42839 YDR365W-BYDR365W-B 5268 nt2.56□□□□□ -2
VNX1P42839 YER138CYER138C 5268 nt2.56□□□□□ -2
Retrieved 100 of 7,029 protein–RNA pairs in 74.9 ms