Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.75■■□□□ 1.07
USP8P40818 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.75■■□□□ 1.07
USP8P40818 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
USP8P40818 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
USP8P40818 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.75■■□□□ 1.07
USP8P40818 DPP3P2-201ENST00000416030 1696 ntBASIC21.75■■□□□ 1.07
USP8P40818 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
USP8P40818 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.75■■□□□ 1.07
USP8P40818 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
USP8P40818 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.75■■□□□ 1.07
USP8P40818 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.74■■□□□ 1.07
USP8P40818 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
USP8P40818 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.74■■□□□ 1.07
USP8P40818 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
USP8P40818 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
USP8P40818 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
USP8P40818 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
USP8P40818 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.74■■□□□ 1.07
USP8P40818 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.74■■□□□ 1.07
USP8P40818 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
USP8P40818 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
USP8P40818 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
USP8P40818 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.74■■□□□ 1.07
USP8P40818 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
USP8P40818 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
USP8P40818 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
USP8P40818 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
USP8P40818 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.73■■□□□ 1.07
USP8P40818 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
USP8P40818 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
USP8P40818 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.73■■□□□ 1.07
USP8P40818 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.73■■□□□ 1.07
USP8P40818 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.73■■□□□ 1.07
USP8P40818 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
USP8P40818 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
USP8P40818 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
USP8P40818 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
USP8P40818 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
USP8P40818 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.73■■□□□ 1.07
USP8P40818 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
USP8P40818 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
USP8P40818 AC099778.1-201ENST00000568593 1911 ntBASIC21.72■■□□□ 1.07
USP8P40818 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
USP8P40818 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
USP8P40818 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
USP8P40818 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
USP8P40818 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.72■■□□□ 1.07
USP8P40818 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
USP8P40818 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
USP8P40818 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.72■■□□□ 1.07
USP8P40818 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.72■■□□□ 1.07
USP8P40818 AC005181.1-201ENST00000604782 1256 ntBASIC21.72■■□□□ 1.07
USP8P40818 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
USP8P40818 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.72■■□□□ 1.07
USP8P40818 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
USP8P40818 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
USP8P40818 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
USP8P40818 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
USP8P40818 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
USP8P40818 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
USP8P40818 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.72■■□□□ 1.07
USP8P40818 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.71■■□□□ 1.07
USP8P40818 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.71■■□□□ 1.07
USP8P40818 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.71■■□□□ 1.07
USP8P40818 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.71■■□□□ 1.07
USP8P40818 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.71■■□□□ 1.07
USP8P40818 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.71■■□□□ 1.07
USP8P40818 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
USP8P40818 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
USP8P40818 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.71■■□□□ 1.07
USP8P40818 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
USP8P40818 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
USP8P40818 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
USP8P40818 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
USP8P40818 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
USP8P40818 MCRIP2P1-201ENST00000394346 511 ntBASIC21.71■■□□□ 1.07
USP8P40818 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.71■■□□□ 1.07
USP8P40818 AC073111.5-205ENST00000641717 521 ntBASIC21.71■■□□□ 1.07
USP8P40818 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
USP8P40818 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.71■■□□□ 1.07
USP8P40818 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
USP8P40818 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
USP8P40818 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.71■■□□□ 1.07
USP8P40818 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
USP8P40818 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
USP8P40818 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
USP8P40818 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
USP8P40818 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.07
USP8P40818 EML3-217ENST00000531557 2509 ntTSL 5 BASIC21.7■■□□□ 1.06
USP8P40818 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.7■■□□□ 1.06
USP8P40818 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
USP8P40818 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
USP8P40818 AL355472.2-201ENST00000422958 438 ntBASIC21.7■■□□□ 1.06
USP8P40818 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.7■■□□□ 1.06
USP8P40818 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
USP8P40818 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
USP8P40818 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC21.7■■□□□ 1.06
USP8P40818 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
USP8P40818 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
USP8P40818 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms