Protein–RNA interactions for Protein: P40505

SDS3, Transcriptional regulatory protein SDS3, yeastyeast

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SDS3P40505 BPH1YCR032W 6504 nt1.91□□□□□ -2.1
SDS3P40505 CFT1YDR301W 4074 nt1.91□□□□□ -2.1
SDS3P40505 UTP21YLR409C 2820 nt1.9□□□□□ -2.1
SDS3P40505 PRP5YBR237W 2550 nt1.9□□□□□ -2.11
SDS3P40505 OST4YDL232W 111 nt1.9□□□□□ -2.11
SDS3P40505 HUG1YML058W-A 207 nt1.9□□□□□ -2.11
SDS3P40505 YNL067W-BYNL067W-B 141 nt1.9□□□□□ -2.11
SDS3P40505 YNL211CYNL211C 261 nt1.9□□□□□ -2.11
SDS3P40505 PKH2YOL100W 3246 nt1.89□□□□□ -2.11
SDS3P40505 YJL026C-AYJL026C-A 222 nt1.89□□□□□ -2.11
SDS3P40505 MEC1YBR136W 7107 nt1.88□□□□□ -2.11
SDS3P40505 TRL1YJL087C 2484 nt1.88□□□□□ -2.11
SDS3P40505 MDS3YGL197W 4464 nt1.88□□□□□ -2.11
SDS3P40505 YIL002W-AYIL002W-A 210 nt1.87□□□□□ -2.11
SDS3P40505 YLR282CYLR282C 342 nt1.87□□□□□ -2.11
SDS3P40505 YLL054CYLL054C 2532 nt1.87□□□□□ -2.11
SDS3P40505 MYO4YAL029C 4416 nt1.87□□□□□ -2.11
SDS3P40505 PKH3YDR466W 2697 nt1.86□□□□□ -2.11
SDS3P40505 TTI1YKL033W 3117 nt1.86□□□□□ -2.11
SDS3P40505 YLR035C-AYLR035C-A 3468 nt1.86□□□□□ -2.11
SDS3P40505 SBH1YER087C-B 249 nt1.86□□□□□ -2.11
SDS3P40505 YKR075W-AYKR075W-A 270 nt1.86□□□□□ -2.11
SDS3P40505 HER1YOR227W 3741 nt1.86□□□□□ -2.11
SDS3P40505 SYH1YPL105C 2550 nt1.86□□□□□ -2.11
SDS3P40505 COG4YPR105C 2586 nt1.85□□□□□ -2.11
SDS3P40505 YLR422WYLR422W 5799 nt1.85□□□□□ -2.11
SDS3P40505 SOM1YEL059C-A 225 nt1.85□□□□□ -2.11
SDS3P40505 YMR175W-AYMR175W-A 195 nt1.85□□□□□ -2.11
SDS3P40505 PET309YLR067C 2898 nt1.85□□□□□ -2.11
SDS3P40505 RPL37BYDR500C 267 nt1.84□□□□□ -2.11
SDS3P40505 CHS6YJL099W 2241 nt1.84□□□□□ -2.11
SDS3P40505 PMD1YER132C 5262 nt1.84□□□□□ -2.12
SDS3P40505 ADR1YDR216W 3972 nt1.83□□□□□ -2.12
SDS3P40505 CTR9YOL145C 3234 nt1.83□□□□□ -2.12
SDS3P40505 IRA1YBR140C 9279 nt1.83□□□□□ -2.12
SDS3P40505 IRE1YHR079C 3348 nt1.83□□□□□ -2.12
SDS3P40505 STF2YGR008C 255 nt1.83□□□□□ -2.12
SDS3P40505 APL1YJR005W 2103 nt1.83□□□□□ -2.12
SDS3P40505 SLI15YBR156C 2097 nt1.82□□□□□ -2.12
SDS3P40505 YGL041C-BYGL041C-B 183 nt1.81□□□□□ -2.12
SDS3P40505 FRK1YPL141C 2598 nt1.81□□□□□ -2.12
SDS3P40505 UBR2YLR024C 5619 nt1.81□□□□□ -2.12
SDS3P40505 HIR3YJR140C 4947 nt1.8□□□□□ -2.12
SDS3P40505 IRC20YLR247C 4671 nt1.8□□□□□ -2.12
SDS3P40505 YHR214C-BYHR214C-B 5382 nt1.79□□□□□ -2.12
SDS3P40505 YGL182CYGL182C 324 nt1.79□□□□□ -2.12
SDS3P40505 TRM3YDL112W 4311 nt1.79□□□□□ -2.12
SDS3P40505 MYO2YOR326W 4725 nt1.79□□□□□ -2.12
SDS3P40505 YCR087C-AYCR087C-A 462 nt1.78□□□□□ -2.12
SDS3P40505 YDL206WYDL206W 2289 nt1.77□□□□□ -2.13
SDS3P40505 UTP8YGR128C 2142 nt1.76□□□□□ -2.13
SDS3P40505 SFB2YNL049C 2631 nt1.76□□□□□ -2.13
SDS3P40505 QCR9YGR183C 201 nt1.76□□□□□ -2.13
SDS3P40505 NUP192YJL039C 5052 nt1.76□□□□□ -2.13
SDS3P40505 YGL123C-AYGL123C-A 231 nt1.75□□□□□ -2.13
SDS3P40505 YAL067W-AYAL067W-A 228 nt1.75□□□□□ -2.13
SDS3P40505 STB6YKL072W 2301 nt1.75□□□□□ -2.13
SDS3P40505 MSH6YDR097C 3729 nt1.75□□□□□ -2.13
SDS3P40505 VPS15YBR097W 4365 nt1.75□□□□□ -2.13
SDS3P40505 NUP157YER105C 4176 nt1.74□□□□□ -2.13
SDS3P40505 YIL142C-AYIL142C-A 333 nt1.74□□□□□ -2.13
SDS3P40505 DNF3YMR162C 4971 nt1.73□□□□□ -2.13
SDS3P40505 CAT8YMR280C 4302 nt1.73□□□□□ -2.13
SDS3P40505 YHR131W-AYHR131W-A 246 nt1.73□□□□□ -2.13
SDS3P40505 YBL039C-AYBL039C-A 84 nt1.73□□□□□ -2.13
SDS3P40505 BFR2YDR299W 1605 nt1.73□□□□□ -2.13
SDS3P40505 YLL020CYLL020C 306 nt1.72□□□□□ -2.13
SDS3P40505 COA6YMR244C-A 315 nt1.72□□□□□ -2.13
SDS3P40505 YOR161W-AYOR161W-A 81 nt1.72□□□□□ -2.13
SDS3P40505 SPO24YPR036W-A 204 nt1.72□□□□□ -2.13
SDS3P40505 snR39BsnR39B 96 nt1.72□□□□□ -2.13
SDS3P40505 UFD2YDL190C 2886 nt1.72□□□□□ -2.13
SDS3P40505 YLR419WYLR419W 4308 nt1.72□□□□□ -2.13
SDS3P40505 TDA9YML081W 3756 nt1.71□□□□□ -2.14
SDS3P40505 SPC110YDR356W 2835 nt1.7□□□□□ -2.14
SDS3P40505 SEY1YOR165W 2331 nt1.69□□□□□ -2.14
SDS3P40505 CHS1YNL192W 3396 nt1.68□□□□□ -2.14
SDS3P40505 SXM1YDR395W 2835 nt1.68□□□□□ -2.14
SDS3P40505 TAH1YCR060W 336 nt1.68□□□□□ -2.14
SDS3P40505 RCO1YMR075W 2055 nt1.68□□□□□ -2.14
SDS3P40505 SSK2YNR031C 4740 nt1.68□□□□□ -2.14
SDS3P40505 POL5YEL055C 3069 nt1.68□□□□□ -2.14
SDS3P40505 RSM22YKL155C 1887 nt1.67□□□□□ -2.14
SDS3P40505 SEC63YOR254C 1992 nt1.67□□□□□ -2.14
SDS3P40505 RAD50YNL250W 3939 nt1.67□□□□□ -2.14
SDS3P40505 FIG2YCR089W 4830 nt1.66□□□□□ -2.14
SDS3P40505 tS(GCU)Q1tS(GCU)Q1 86 nt1.66□□□□□ -2.14
SDS3P40505 YKL100W-AYKL100W-A 90 nt1.65□□□□□ -2.15
SDS3P40505 EAF1YDR359C 2949 nt1.65□□□□□ -2.15
SDS3P40505 COX5BYIL111W 456 nt1.64□□□□□ -2.15
SDS3P40505 YLL066W-BYLL066W-B 171 nt1.64□□□□□ -2.15
SDS3P40505 LAA1YJL207C 6045 nt1.64□□□□□ -2.15
SDS3P40505 SMC1YFL008W 3678 nt1.63□□□□□ -2.15
SDS3P40505 NUT1YGL151W 3399 nt1.62□□□□□ -2.15
SDS3P40505 YJR039WYJR039W 3366 nt1.62□□□□□ -2.15
SDS3P40505 tM(CAU)Q2tM(CAU)Q2 78 nt1.62□□□□□ -2.15
SDS3P40505 TBS1YBR150C 3285 nt1.62□□□□□ -2.15
SDS3P40505 MSH3YCR092C 3057 nt1.61□□□□□ -2.15
SDS3P40505 snR45snR45 172 nt1.61□□□□□ -2.15
SDS3P40505 MMS4YBR098W 2076 nt1.6□□□□□ -2.15
Retrieved 100 of 7,029 protein–RNA pairs in 36.7 ms