Protein–RNA interactions for Protein: P40343

VPS27, Vacuolar protein sorting-associated protein 27, yeastyeast

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS27P40343 YPR117WYPR117W 7470 nt1.41□□□□□ -2.18
VPS27P40343 YBR200W-AYBR200W-A 165 nt1.4□□□□□ -2.19
VPS27P40343 KAP120YPL125W 3099 nt1.39□□□□□ -2.19
VPS27P40343 YGL052WYGL052W 306 nt1.39□□□□□ -2.19
VPS27P40343 YHR063W-AYHR063W-A 336 nt1.39□□□□□ -2.19
VPS27P40343 SPT7YBR081C 3999 nt1.39□□□□□ -2.19
VPS27P40343 TTI1YKL033W 3117 nt1.38□□□□□ -2.19
VPS27P40343 tV(UAC)BtV(UAC)B 74 nt1.36□□□□□ -2.19
VPS27P40343 tV(UAC)DtV(UAC)D 74 nt1.36□□□□□ -2.19
VPS27P40343 YNL284C-BYNL284C-B 5268 nt1.36□□□□□ -2.19
VPS27P40343 BEM2YER155C 6504 nt1.35□□□□□ -2.19
VPS27P40343 YOR282WYOR282W 321 nt1.35□□□□□ -2.19
VPS27P40343 snR49snR49 165 nt1.35□□□□□ -2.19
VPS27P40343 WAR1YML076C 2835 nt1.35□□□□□ -2.19
VPS27P40343 FIG2YCR089W 4830 nt1.35□□□□□ -2.19
VPS27P40343 YCR022CYCR022C 345 nt1.34□□□□□ -2.19
VPS27P40343 YPR092WYPR092W 306 nt1.34□□□□□ -2.19
VPS27P40343 MCM10YIL150C 1716 nt1.33□□□□□ -2.2
VPS27P40343 OLI1Q0130 231 nt1.33□□□□□ -2.2
VPS27P40343 ECM12YHR021W-A 456 nt1.32□□□□□ -2.2
VPS27P40343 SGF11YPL047W 300 nt1.32□□□□□ -2.2
VPS27P40343 tF(GAA)QtF(GAA)Q 75 nt1.31□□□□□ -2.2
VPS27P40343 YJL026C-AYJL026C-A 222 nt1.31□□□□□ -2.2
VPS27P40343 snR74snR74 88 nt1.3□□□□□ -2.2
VPS27P40343 YDR354C-AYDR354C-A 144 nt1.29□□□□□ -2.2
VPS27P40343 YMR307C-AYMR307C-A 195 nt1.29□□□□□ -2.2
VPS27P40343 PRP16YKR086W 3216 nt1.29□□□□□ -2.2
VPS27P40343 ASE1YOR058C 2658 nt1.29□□□□□ -2.2
VPS27P40343 APL1YJR005W 2103 nt1.28□□□□□ -2.2
VPS27P40343 snR8snR8 190 nt1.28□□□□□ -2.2
VPS27P40343 YNL211CYNL211C 261 nt1.28□□□□□ -2.2
VPS27P40343 NOP9YJL010C 2001 nt1.28□□□□□ -2.2
VPS27P40343 VAM6YDL077C 3150 nt1.28□□□□□ -2.21
VPS27P40343 YGL188C-AYGL188C-A 141 nt1.27□□□□□ -2.21
VPS27P40343 SCC2YDR180W 4482 nt1.27□□□□□ -2.21
VPS27P40343 CMC4YMR194C-B 222 nt1.26□□□□□ -2.21
VPS27P40343 YLL019W-AYLL019W-A 93 nt1.25□□□□□ -2.21
VPS27P40343 YAL067W-AYAL067W-A 228 nt1.25□□□□□ -2.21
VPS27P40343 YDL073WYDL073W 2955 nt1.25□□□□□ -2.21
VPS27P40343 snR55snR55 98 nt1.24□□□□□ -2.21
VPS27P40343 ABF2YMR072W 552 nt1.24□□□□□ -2.21
VPS27P40343 YOL155W-AYOL155W-A 135 nt1.24□□□□□ -2.21
VPS27P40343 DOP1YDR141C 5097 nt1.24□□□□□ -2.21
VPS27P40343 YIR030W-AYIR030W-A 384 nt1.23□□□□□ -2.21
VPS27P40343 YOR072W-BYOR072W-B 162 nt1.23□□□□□ -2.21
VPS27P40343 PAA1YDR071C 576 nt1.22□□□□□ -2.21
VPS27P40343 ISD11YER048W-A 285 nt1.22□□□□□ -2.21
VPS27P40343 YPL044CYPL044C 549 nt1.22□□□□□ -2.21
VPS27P40343 NPR2YEL062W 1848 nt1.22□□□□□ -2.21
VPS27P40343 YDL196WYDL196W 330 nt1.21□□□□□ -2.22
VPS27P40343 YGL041CYGL041C 204 nt1.21□□□□□ -2.22
VPS27P40343 snR80snR80 171 nt1.19□□□□□ -2.22
VPS27P40343 YDR366CYDR366C 399 nt1.19□□□□□ -2.22
VPS27P40343 YFR012W-AYFR012W-A 87 nt1.19□□□□□ -2.22
VPS27P40343 EMT1tM(CAU)D 73 nt1.19□□□□□ -2.22
VPS27P40343 EMT5tM(CAU)J1 73 nt1.19□□□□□ -2.22
VPS27P40343 EMT3tM(CAU)J2 73 nt1.19□□□□□ -2.22
VPS27P40343 EMT4tM(CAU)M 73 nt1.19□□□□□ -2.22
VPS27P40343 EMT2tM(CAU)O2 73 nt1.19□□□□□ -2.22
VPS27P40343 MYO1YHR023W 5787 nt1.19□□□□□ -2.22
VPS27P40343 GEA2YEL022W 4380 nt1.18□□□□□ -2.22
VPS27P40343 YBR182C-AYBR182C-A 195 nt1.18□□□□□ -2.22
VPS27P40343 YJR029WYJR029W 5268 nt1.18□□□□□ -2.22
VPS27P40343 YPR137C-BYPR137C-B 5268 nt1.18□□□□□ -2.22
VPS27P40343 YKU70YMR284W 1809 nt1.17□□□□□ -2.22
VPS27P40343 YDL185C-AYDL185C-A 228 nt1.17□□□□□ -2.22
VPS27P40343 SMC1YFL008W 3678 nt1.16□□□□□ -2.22
VPS27P40343 PMP1YCR024C-A 123 nt1.16□□□□□ -2.22
VPS27P40343 RPL26BYGR034W 384 nt1.15□□□□□ -2.23
VPS27P40343 PAU24YBR301W 363 nt1.15□□□□□ -2.23
VPS27P40343 YOR302WYOR302W 78 nt1.14□□□□□ -2.23
VPS27P40343 HAL9YOL089C 3093 nt1.12□□□□□ -2.23
VPS27P40343 BFR2YDR299W 1605 nt1.12□□□□□ -2.23
VPS27P40343 YIL134C-AYIL134C-A 204 nt1.1□□□□□ -2.23
VPS27P40343 YNL097C-BYNL097C-B 123 nt1.09□□□□□ -2.23
VPS27P40343 BUD3YCL014W 4911 nt1.09□□□□□ -2.24
VPS27P40343 COX12YLR038C 252 nt1.08□□□□□ -2.24
VPS27P40343 YCR018C-AYCR018C-A 255 nt1.07□□□□□ -2.24
VPS27P40343 YLR282CYLR282C 342 nt1.07□□□□□ -2.24
VPS27P40343 RPS30BYOR182C 192 nt1.07□□□□□ -2.24
VPS27P40343 snR190snR190 190 nt1.07□□□□□ -2.24
VPS27P40343 SEC8YPR055W 3198 nt1.07□□□□□ -2.24
VPS27P40343 COY1YKL179C 2040 nt1.06□□□□□ -2.24
VPS27P40343 COX5BYIL111W 456 nt1.06□□□□□ -2.24
VPS27P40343 YOR345CYOR345C 351 nt1.06□□□□□ -2.24
VPS27P40343 YGL123C-AYGL123C-A 231 nt1.05□□□□□ -2.24
VPS27P40343 YPR160W-AYPR160W-A 81 nt1.05□□□□□ -2.24
VPS27P40343 YLR399W-AYLR399W-A 105 nt1.03□□□□□ -2.24
VPS27P40343 YMR158W-BYMR158W-B 321 nt1.03□□□□□ -2.24
VPS27P40343 YOR161W-AYOR161W-A 81 nt1.03□□□□□ -2.24
VPS27P40343 APQ12YIL040W 417 nt1.02□□□□□ -2.25
VPS27P40343 BLI1YKL061W 342 nt1.02□□□□□ -2.25
VPS27P40343 YLR041WYLR041W 321 nt1.02□□□□□ -2.25
VPS27P40343 RKR1YMR247C 4689 nt1.01□□□□□ -2.25
VPS27P40343 PRP5YBR237W 2550 nt1.01□□□□□ -2.25
VPS27P40343 ULI1YFR026C 510 nt1□□□□□ -2.25
VPS27P40343 YIL002W-AYIL002W-A 210 nt1□□□□□ -2.25
VPS27P40343 YKL100W-AYKL100W-A 90 nt1□□□□□ -2.25
VPS27P40343 YBR131C-AYBR131C-A 90 nt1□□□□□ -2.25
VPS27P40343 YIL142C-AYIL142C-A 333 nt0.99□□□□□ -2.25
Retrieved 100 of 7,029 protein–RNA pairs in 6.7 ms