Protein–RNA interactions for Protein: P40327

RPT2, 26S proteasome regulatory subunit 4 homolog, yeastyeast

Known RBP Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPT2P40327 YLL020CYLL020C 306 nt1.47□□□□□ -2.17
RPT2P40327 YNL337WYNL337W 255 nt1.47□□□□□ -2.17
RPT2P40327 YIL020C-AYIL020C-A 339 nt1.46□□□□□ -2.18
RPT2P40327 YBR182C-AYBR182C-A 195 nt1.46□□□□□ -2.18
RPT2P40327 YLR422WYLR422W 5799 nt1.46□□□□□ -2.18
RPT2P40327 FIG2YCR089W 4830 nt1.45□□□□□ -2.18
RPT2P40327 PAM16YJL104W 450 nt1.45□□□□□ -2.18
RPT2P40327 YBR200W-AYBR200W-A 165 nt1.45□□□□□ -2.18
RPT2P40327 STO1YMR125W 2586 nt1.45□□□□□ -2.18
RPT2P40327 tQ(UUG)E2tQ(UUG)E2 72 nt1.44□□□□□ -2.18
RPT2P40327 YIR030W-AYIR030W-A 384 nt1.44□□□□□ -2.18
RPT2P40327 YBR221W-AYBR221W-A 105 nt1.44□□□□□ -2.18
RPT2P40327 CCH1YGR217W 6120 nt1.44□□□□□ -2.18
RPT2P40327 YKU70YMR284W 1809 nt1.43□□□□□ -2.18
RPT2P40327 YAR009CYAR009C 3591 nt1.43□□□□□ -2.18
RPT2P40327 YBR206WYBR206W 324 nt1.43□□□□□ -2.18
RPT2P40327 SET3YKR029C 2256 nt1.43□□□□□ -2.18
RPT2P40327 WAR1YML076C 2835 nt1.43□□□□□ -2.18
RPT2P40327 CDC25YLR310C 4770 nt1.43□□□□□ -2.18
RPT2P40327 YOR072W-BYOR072W-B 162 nt1.42□□□□□ -2.18
RPT2P40327 NUP188YML103C 4968 nt1.41□□□□□ -2.18
RPT2P40327 AHC1YOR023C 1701 nt1.4□□□□□ -2.18
RPT2P40327 tH(GUG)E1tH(GUG)E1 72 nt1.4□□□□□ -2.19
RPT2P40327 tH(GUG)E2tH(GUG)E2 72 nt1.4□□□□□ -2.19
RPT2P40327 tH(GUG)G1tH(GUG)G1 72 nt1.4□□□□□ -2.19
RPT2P40327 tH(GUG)G2tH(GUG)G2 72 nt1.4□□□□□ -2.19
RPT2P40327 tH(GUG)HtH(GUG)H 72 nt1.4□□□□□ -2.19
RPT2P40327 tH(GUG)KtH(GUG)K 72 nt1.4□□□□□ -2.19
RPT2P40327 tH(GUG)MtH(GUG)M 72 nt1.4□□□□□ -2.19
RPT2P40327 OLI1Q0130 231 nt1.4□□□□□ -2.19
RPT2P40327 ECM12YHR021W-A 456 nt1.4□□□□□ -2.19
RPT2P40327 MSH3YCR092C 3057 nt1.39□□□□□ -2.19
RPT2P40327 YDL185C-AYDL185C-A 228 nt1.39□□□□□ -2.19
RPT2P40327 LAA1YJL207C 6045 nt1.38□□□□□ -2.19
RPT2P40327 ISD11YER048W-A 285 nt1.38□□□□□ -2.19
RPT2P40327 YLL019W-AYLL019W-A 93 nt1.38□□□□□ -2.19
RPT2P40327 SLD3YGL113W 2007 nt1.38□□□□□ -2.19
RPT2P40327 EAF1YDR359C 2949 nt1.37□□□□□ -2.19
RPT2P40327 YNL097C-BYNL097C-B 123 nt1.37□□□□□ -2.19
RPT2P40327 YEL014CYEL014C 306 nt1.36□□□□□ -2.19
RPT2P40327 YNL198CYNL198C 303 nt1.35□□□□□ -2.19
RPT2P40327 YOR225WYOR225W 330 nt1.35□□□□□ -2.19
RPT2P40327 YBR131C-AYBR131C-A 90 nt1.35□□□□□ -2.19
RPT2P40327 YDL196WYDL196W 330 nt1.34□□□□□ -2.19
RPT2P40327 ULI1YFR026C 510 nt1.34□□□□□ -2.19
RPT2P40327 STB6YKL072W 2301 nt1.33□□□□□ -2.2
RPT2P40327 APL1YJR005W 2103 nt1.33□□□□□ -2.2
RPT2P40327 YDR354C-AYDR354C-A 144 nt1.32□□□□□ -2.2
RPT2P40327 YOR345CYOR345C 351 nt1.32□□□□□ -2.2
RPT2P40327 PAA1YDR071C 576 nt1.31□□□□□ -2.2
RPT2P40327 YGL007C-AYGL007C-A 87 nt1.31□□□□□ -2.2
RPT2P40327 Q0032Q0032 291 nt1.3□□□□□ -2.2
RPT2P40327 YJL182CYJL182C 318 nt1.3□□□□□ -2.2
RPT2P40327 YGR130CYGR130C 2451 nt1.29□□□□□ -2.2
RPT2P40327 YJL026C-AYJL026C-A 222 nt1.29□□□□□ -2.2
RPT2P40327 RPL33BYOR234C 324 nt1.29□□□□□ -2.2
RPT2P40327 NUP157YER105C 4176 nt1.28□□□□□ -2.2
RPT2P40327 YJL150WYJL150W 303 nt1.28□□□□□ -2.2
RPT2P40327 YLR466C-BYLR466C-B 117 nt1.28□□□□□ -2.2
RPT2P40327 TTI1YKL033W 3117 nt1.28□□□□□ -2.2
RPT2P40327 GEA2YEL022W 4380 nt1.28□□□□□ -2.21
RPT2P40327 YGR151CYGR151C 336 nt1.27□□□□□ -2.21
RPT2P40327 YPL044CYPL044C 549 nt1.27□□□□□ -2.21
RPT2P40327 snR46snR46 197 nt1.26□□□□□ -2.21
RPT2P40327 CDC39YCR093W 6327 nt1.25□□□□□ -2.21
RPT2P40327 KAP120YPL125W 3099 nt1.25□□□□□ -2.21
RPT2P40327 EMT1tM(CAU)D 73 nt1.23□□□□□ -2.21
RPT2P40327 EMT5tM(CAU)J1 73 nt1.23□□□□□ -2.21
RPT2P40327 EMT3tM(CAU)J2 73 nt1.23□□□□□ -2.21
RPT2P40327 EMT4tM(CAU)M 73 nt1.23□□□□□ -2.21
RPT2P40327 EMT2tM(CAU)O2 73 nt1.23□□□□□ -2.21
RPT2P40327 YNL211CYNL211C 261 nt1.23□□□□□ -2.21
RPT2P40327 RPS30BYOR182C 192 nt1.23□□□□□ -2.21
RPT2P40327 VAM6YDL077C 3150 nt1.22□□□□□ -2.21
RPT2P40327 NOP9YJL010C 2001 nt1.22□□□□□ -2.21
RPT2P40327 YIL134C-AYIL134C-A 204 nt1.22□□□□□ -2.21
RPT2P40327 YAL067W-AYAL067W-A 228 nt1.22□□□□□ -2.21
RPT2P40327 CMC4YMR194C-B 222 nt1.22□□□□□ -2.21
RPT2P40327 snR52snR52 92 nt1.22□□□□□ -2.21
RPT2P40327 RPL26BYGR034W 384 nt1.21□□□□□ -2.22
RPT2P40327 YLR342W-AYLR342W-A 174 nt1.21□□□□□ -2.22
RPT2P40327 HAL9YOL089C 3093 nt1.21□□□□□ -2.22
RPT2P40327 PRP39YML046W 1890 nt1.2□□□□□ -2.22
RPT2P40327 COY1YKL179C 2040 nt1.2□□□□□ -2.22
RPT2P40327 tV(UAC)BtV(UAC)B 74 nt1.19□□□□□ -2.22
RPT2P40327 tV(UAC)DtV(UAC)D 74 nt1.19□□□□□ -2.22
RPT2P40327 SIP4YJL089W 2490 nt1.19□□□□□ -2.22
RPT2P40327 COX12YLR038C 252 nt1.19□□□□□ -2.22
RPT2P40327 YLR294CYLR294C 330 nt1.19□□□□□ -2.22
RPT2P40327 PMP1YCR024C-A 123 nt1.18□□□□□ -2.22
RPT2P40327 TRS65YGR166W 1683 nt1.17□□□□□ -2.22
RPT2P40327 IML1YJR138W 4755 nt1.17□□□□□ -2.22
RPT2P40327 YNL284C-BYNL284C-B 5268 nt1.17□□□□□ -2.22
RPT2P40327 YCR038W-AYCR038W-A 126 nt1.16□□□□□ -2.22
RPT2P40327 YEL073CYEL073C 324 nt1.15□□□□□ -2.23
RPT2P40327 YNL338WYNL338W 159 nt1.15□□□□□ -2.23
RPT2P40327 SCC2YDR180W 4482 nt1.14□□□□□ -2.23
RPT2P40327 YGL123C-AYGL123C-A 231 nt1.13□□□□□ -2.23
RPT2P40327 YIL002W-AYIL002W-A 210 nt1.13□□□□□ -2.23
RPT2P40327 YFR012W-AYFR012W-A 87 nt1.12□□□□□ -2.23
Retrieved 100 of 7,029 protein–RNA pairs in 9.9 ms