Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
GDNFP39905 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GDNFP39905 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GDNFP39905 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GDNFP39905 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GDNFP39905 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
GDNFP39905 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.38■□□□□ 0.37
GDNFP39905 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.38■□□□□ 0.37
GDNFP39905 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
GDNFP39905 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GDNFP39905 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
GDNFP39905 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
GDNFP39905 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC17.38■□□□□ 0.37
GDNFP39905 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GDNFP39905 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
GDNFP39905 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
GDNFP39905 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GDNFP39905 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
GDNFP39905 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.38■□□□□ 0.37
GDNFP39905 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
GDNFP39905 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GDNFP39905 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GDNFP39905 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
GDNFP39905 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
GDNFP39905 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
GDNFP39905 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
GDNFP39905 YBX1P1-201ENST00000445822 960 ntBASIC17.38■□□□□ 0.37
GDNFP39905 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC17.38■□□□□ 0.37
GDNFP39905 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GDNFP39905 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC17.38■□□□□ 0.37
GDNFP39905 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC17.38■□□□□ 0.37
GDNFP39905 CPT2-209ENST00000636935 803 ntTSL 5 BASIC17.38■□□□□ 0.37
GDNFP39905 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
GDNFP39905 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
GDNFP39905 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
GDNFP39905 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GDNFP39905 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.38■□□□□ 0.37
GDNFP39905 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
GDNFP39905 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GDNFP39905 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GDNFP39905 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
GDNFP39905 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC17.38■□□□□ 0.37
GDNFP39905 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
GDNFP39905 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GDNFP39905 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GDNFP39905 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GDNFP39905 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GDNFP39905 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
GDNFP39905 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
GDNFP39905 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GDNFP39905 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
GDNFP39905 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
GDNFP39905 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GDNFP39905 FXN-202ENST00000396364 980 ntTSL 5 BASIC17.37■□□□□ 0.37
GDNFP39905 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC17.37■□□□□ 0.37
GDNFP39905 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC17.37■□□□□ 0.37
GDNFP39905 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GDNFP39905 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC17.37■□□□□ 0.37
GDNFP39905 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.37■□□□□ 0.37
GDNFP39905 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC17.37■□□□□ 0.37
GDNFP39905 LETM1P2-201ENST00000597330 2178 ntBASIC17.37■□□□□ 0.37
GDNFP39905 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.37■□□□□ 0.37
GDNFP39905 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
GDNFP39905 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.37■□□□□ 0.37
GDNFP39905 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.37■□□□□ 0.37
GDNFP39905 LINC02228-203ENST00000641970 1355 ntBASIC17.37■□□□□ 0.37
GDNFP39905 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
GDNFP39905 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GDNFP39905 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
GDNFP39905 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GDNFP39905 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
GDNFP39905 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
GDNFP39905 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.36■□□□□ 0.37
GDNFP39905 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
GDNFP39905 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GDNFP39905 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GDNFP39905 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
GDNFP39905 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.36■□□□□ 0.37
GDNFP39905 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GDNFP39905 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.36■□□□□ 0.37
GDNFP39905 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.36■□□□□ 0.37
GDNFP39905 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GDNFP39905 AC123595.1-201ENST00000440769 1046 ntBASIC17.36■□□□□ 0.37
GDNFP39905 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC17.36■□□□□ 0.37
GDNFP39905 CCDC92B-201ENST00000575506 885 ntBASIC17.36■□□□□ 0.37
GDNFP39905 RAB43-208ENST00000615093 783 ntTSL 5 BASIC17.36■□□□□ 0.37
GDNFP39905 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC17.36■□□□□ 0.37
GDNFP39905 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
GDNFP39905 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GDNFP39905 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GDNFP39905 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GDNFP39905 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
GDNFP39905 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
GDNFP39905 MFF-207ENST00000409565 1548 ntTSL 2 BASIC17.36■□□□□ 0.37
GDNFP39905 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
GDNFP39905 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GDNFP39905 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.36■□□□□ 0.37
GDNFP39905 TMEM179-206ENST00000616017 1645 ntBASIC17.36■□□□□ 0.37
GDNFP39905 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.36■□□□□ 0.37
GDNFP39905 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms