Protein–RNA interactions for Protein: P38789

SSF1, Ribosome biogenesis protein SSF1, yeastyeast

Predicted RBP Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSF1P38789 YBR221W-AYBR221W-A 105 nt2.18□□□□□ -2.06
SSF1P38789 YHR214C-BYHR214C-B 5382 nt2.17□□□□□ -2.06
SSF1P38789 RPS30BYOR182C 192 nt2.17□□□□□ -2.06
SSF1P38789 COX12YLR038C 252 nt2.16□□□□□ -2.06
SSF1P38789 YNL170WYNL170W 396 nt2.16□□□□□ -2.06
SSF1P38789 SMC1YFL008W 3678 nt2.14□□□□□ -2.07
SSF1P38789 YAR009CYAR009C 3591 nt2.14□□□□□ -2.07
SSF1P38789 RSM22YKL155C 1887 nt2.14□□□□□ -2.07
SSF1P38789 YAL067W-AYAL067W-A 228 nt2.14□□□□□ -2.07
SSF1P38789 POL5YEL055C 3069 nt2.14□□□□□ -2.07
SSF1P38789 YIL134C-AYIL134C-A 204 nt2.13□□□□□ -2.07
SSF1P38789 YPL044CYPL044C 549 nt2.13□□□□□ -2.07
SSF1P38789 COA6YMR244C-A 315 nt2.12□□□□□ -2.07
SSF1P38789 CFT1YDR301W 4074 nt2.12□□□□□ -2.07
SSF1P38789 KAP122YGL016W 3246 nt2.11□□□□□ -2.07
SSF1P38789 YCR038W-AYCR038W-A 126 nt2.11□□□□□ -2.07
SSF1P38789 snR14snR14 160 nt2.11□□□□□ -2.07
SSF1P38789 YOR019WYOR019W 2193 nt2.1□□□□□ -2.07
SSF1P38789 YMR247W-AYMR247W-A 144 nt2.1□□□□□ -2.07
SSF1P38789 YMR045CYMR045C 5268 nt2.1□□□□□ -2.07
SSF1P38789 YGR164WYGR164W 336 nt2.09□□□□□ -2.07
SSF1P38789 MDS3YGL197W 4464 nt2.09□□□□□ -2.08
SSF1P38789 MYO2YOR326W 4725 nt2.08□□□□□ -2.08
SSF1P38789 BST1YFL025C 3090 nt2.08□□□□□ -2.08
SSF1P38789 SNU13YEL026W 381 nt2.08□□□□□ -2.08
SSF1P38789 YIL002W-AYIL002W-A 210 nt2.08□□□□□ -2.08
SSF1P38789 RTP1YMR185W 2946 nt2.08□□□□□ -2.08
SSF1P38789 SDH6YDR379C-A 240 nt2.07□□□□□ -2.08
SSF1P38789 YKL100W-AYKL100W-A 90 nt2.07□□□□□ -2.08
SSF1P38789 EAF1YDR359C 2949 nt2.06□□□□□ -2.08
SSF1P38789 tT(UGU)HtT(UGU)H 72 nt2.06□□□□□ -2.08
SSF1P38789 MON2YNL297C 4911 nt2.06□□□□□ -2.08
SSF1P38789 STO1YMR125W 2586 nt2.05□□□□□ -2.08
SSF1P38789 CDC25YLR310C 4770 nt2.05□□□□□ -2.08
SSF1P38789 PRP42YDR235W 1635 nt2.05□□□□□ -2.08
SSF1P38789 ROM2YLR371W 4071 nt2.05□□□□□ -2.08
SSF1P38789 SET3YKR029C 2256 nt2.05□□□□□ -2.08
SSF1P38789 SWI4YER111C 3282 nt2.04□□□□□ -2.08
SSF1P38789 BRR2YER172C 6492 nt2.03□□□□□ -2.08
SSF1P38789 YGL123C-AYGL123C-A 231 nt2.03□□□□□ -2.08
SSF1P38789 NUP192YJL039C 5052 nt2.03□□□□□ -2.08
SSF1P38789 CLU1YMR012W 3834 nt2.03□□□□□ -2.08
SSF1P38789 MEC1YBR136W 7107 nt2.03□□□□□ -2.09
SSF1P38789 IRC20YLR247C 4671 nt2.01□□□□□ -2.09
SSF1P38789 BPH1YCR032W 6504 nt2.01□□□□□ -2.09
SSF1P38789 YLR419WYLR419W 4308 nt2.01□□□□□ -2.09
SSF1P38789 PRP5YBR237W 2550 nt2.01□□□□□ -2.09
SSF1P38789 NUP145YGL092W 3954 nt2□□□□□ -2.09
SSF1P38789 CMC4YMR194C-B 222 nt2□□□□□ -2.09
SSF1P38789 WAR1YML076C 2835 nt1.99□□□□□ -2.09
SSF1P38789 APL3YBL037W 3078 nt1.99□□□□□ -2.09
SSF1P38789 YHL015W-AYHL015W-A 84 nt1.98□□□□□ -2.09
SSF1P38789 YOR102WYOR102W 351 nt1.98□□□□□ -2.09
SSF1P38789 NOP9YJL010C 2001 nt1.98□□□□□ -2.09
SSF1P38789 AZF1YOR113W 2745 nt1.97□□□□□ -2.09
SSF1P38789 UTP8YGR128C 2142 nt1.97□□□□□ -2.09
SSF1P38789 ANS1YHR126C 480 nt1.97□□□□□ -2.09
SSF1P38789 YBR200W-AYBR200W-A 165 nt1.97□□□□□ -2.09
SSF1P38789 DNF3YMR162C 4971 nt1.97□□□□□ -2.09
SSF1P38789 YOR093CYOR093C 4947 nt1.97□□□□□ -2.09
SSF1P38789 YER053C-AYER053C-A 114 nt1.96□□□□□ -2.1
SSF1P38789 COX5BYIL111W 456 nt1.96□□□□□ -2.1
SSF1P38789 EST2YLR318W 2655 nt1.95□□□□□ -2.1
SSF1P38789 CAT8YMR280C 4302 nt1.95□□□□□ -2.1
SSF1P38789 SXM1YDR395W 2835 nt1.95□□□□□ -2.1
SSF1P38789 BFR2YDR299W 1605 nt1.93□□□□□ -2.1
SSF1P38789 RPL26BYGR034W 384 nt1.92□□□□□ -2.1
SSF1P38789 YLL020CYLL020C 306 nt1.92□□□□□ -2.1
SSF1P38789 YLR282CYLR282C 342 nt1.92□□□□□ -2.1
SSF1P38789 YML002WYML002W 2214 nt1.91□□□□□ -2.1
SSF1P38789 YOR314W-AYOR314W-A 111 nt1.91□□□□□ -2.1
SSF1P38789 snR48snR48 113 nt1.9□□□□□ -2.11
SSF1P38789 SEC3YER008C 4011 nt1.89□□□□□ -2.11
SSF1P38789 MSN5YDR335W 3675 nt1.89□□□□□ -2.11
SSF1P38789 YBL053WYBL053W 375 nt1.89□□□□□ -2.11
SSF1P38789 YOR161W-AYOR161W-A 81 nt1.89□□□□□ -2.11
SSF1P38789 PMD1YER132C 5262 nt1.89□□□□□ -2.11
SSF1P38789 IRA1YBR140C 9279 nt1.88□□□□□ -2.11
SSF1P38789 NUP188YML103C 4968 nt1.88□□□□□ -2.11
SSF1P38789 CHS1YNL192W 3396 nt1.87□□□□□ -2.11
SSF1P38789 MSH3YCR092C 3057 nt1.86□□□□□ -2.11
SSF1P38789 TRM732YMR259C 4263 nt1.86□□□□□ -2.11
SSF1P38789 YGL182CYGL182C 324 nt1.84□□□□□ -2.11
SSF1P38789 snR190snR190 190 nt1.84□□□□□ -2.11
SSF1P38789 GEA2YEL022W 4380 nt1.83□□□□□ -2.12
SSF1P38789 YIL020C-AYIL020C-A 339 nt1.83□□□□□ -2.12
SSF1P38789 CDC31YOR257W 486 nt1.83□□□□□ -2.12
SSF1P38789 NUP157YER105C 4176 nt1.82□□□□□ -2.12
SSF1P38789 VPS15YBR097W 4365 nt1.82□□□□□ -2.12
SSF1P38789 FYV10YIL097W 1551 nt1.78□□□□□ -2.12
SSF1P38789 YLR041WYLR041W 321 nt1.78□□□□□ -2.12
SSF1P38789 YBL039C-AYBL039C-A 84 nt1.78□□□□□ -2.12
SSF1P38789 CHS6YJL099W 2241 nt1.78□□□□□ -2.13
SSF1P38789 SEC21YNL287W 2808 nt1.77□□□□□ -2.13
SSF1P38789 YFR012W-AYFR012W-A 87 nt1.77□□□□□ -2.13
SSF1P38789 LAA1YJL207C 6045 nt1.77□□□□□ -2.13
SSF1P38789 SEC8YPR055W 3198 nt1.76□□□□□ -2.13
SSF1P38789 TAH1YCR060W 336 nt1.76□□□□□ -2.13
SSF1P38789 SPC110YDR356W 2835 nt1.75□□□□□ -2.13
SSF1P38789 ASE1YOR058C 2658 nt1.75□□□□□ -2.13
Retrieved 100 of 7,029 protein–RNA pairs in 12.4 ms