Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.33■□□□□ 0.53
SHC1P29353 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SHC1P29353 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
SHC1P29353 AC020907.5-201ENST00000624372 1936 ntBASIC18.33■□□□□ 0.53
SHC1P29353 KRT8P36-201ENST00000489121 1440 ntBASIC18.33■□□□□ 0.53
SHC1P29353 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
SHC1P29353 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.33■□□□□ 0.52
SHC1P29353 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SHC1P29353 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SHC1P29353 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.33■□□□□ 0.52
SHC1P29353 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
SHC1P29353 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.33■□□□□ 0.52
SHC1P29353 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.33■□□□□ 0.52
SHC1P29353 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.33■□□□□ 0.52
SHC1P29353 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SHC1P29353 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SHC1P29353 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SHC1P29353 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
SHC1P29353 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SHC1P29353 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.33■□□□□ 0.52
SHC1P29353 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.32■□□□□ 0.52
SHC1P29353 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SHC1P29353 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SHC1P29353 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SHC1P29353 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SHC1P29353 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.32■□□□□ 0.52
SHC1P29353 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.32■□□□□ 0.52
SHC1P29353 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SHC1P29353 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SHC1P29353 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
SHC1P29353 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.32■□□□□ 0.52
SHC1P29353 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SHC1P29353 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.32■□□□□ 0.52
SHC1P29353 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.32■□□□□ 0.52
SHC1P29353 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SHC1P29353 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
SHC1P29353 AC092118.2-201ENST00000613495 667 ntBASIC18.32■□□□□ 0.52
SHC1P29353 AL589743.5-201ENST00000616611 1050 ntBASIC18.32■□□□□ 0.52
SHC1P29353 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SHC1P29353 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SHC1P29353 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SHC1P29353 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SHC1P29353 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SHC1P29353 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.32■□□□□ 0.52
SHC1P29353 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SHC1P29353 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SHC1P29353 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
SHC1P29353 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SHC1P29353 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
SHC1P29353 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.31■□□□□ 0.52
SHC1P29353 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SHC1P29353 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
SHC1P29353 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SHC1P29353 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SHC1P29353 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SHC1P29353 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SHC1P29353 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SHC1P29353 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SHC1P29353 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
SHC1P29353 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.31■□□□□ 0.52
SHC1P29353 DUSP5P2-201ENST00000426873 1033 ntBASIC18.31■□□□□ 0.52
SHC1P29353 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.31■□□□□ 0.52
SHC1P29353 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SHC1P29353 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SHC1P29353 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.31■□□□□ 0.52
SHC1P29353 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.31■□□□□ 0.52
SHC1P29353 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SHC1P29353 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SHC1P29353 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SHC1P29353 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
SHC1P29353 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.31■□□□□ 0.52
SHC1P29353 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.31■□□□□ 0.52
SHC1P29353 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.3■□□□□ 0.52
SHC1P29353 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SHC1P29353 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SHC1P29353 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SHC1P29353 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
SHC1P29353 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.3■□□□□ 0.52
SHC1P29353 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SHC1P29353 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.3■□□□□ 0.52
SHC1P29353 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SHC1P29353 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SHC1P29353 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SHC1P29353 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SHC1P29353 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SHC1P29353 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SHC1P29353 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.3■□□□□ 0.52
SHC1P29353 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SHC1P29353 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SHC1P29353 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
SHC1P29353 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SHC1P29353 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SHC1P29353 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SHC1P29353 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SHC1P29353 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.3■□□□□ 0.52
SHC1P29353 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SHC1P29353 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SHC1P29353 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SHC1P29353 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.3■□□□□ 0.52
SHC1P29353 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms