Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
RXRBP28702 AC004980.1-204ENST00000429707 299 ntBASIC26.55■■□□□ 1.84
RXRBP28702 ZNF444P1-201ENST00000559497 298 ntBASIC26.55■■□□□ 1.84
RXRBP28702 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
RXRBP28702 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC26.55■■□□□ 1.84
RXRBP28702 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC26.55■■□□□ 1.84
RXRBP28702 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC26.55■■□□□ 1.84
RXRBP28702 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC26.55■■□□□ 1.84
RXRBP28702 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC26.55■■□□□ 1.84
RXRBP28702 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC26.54■■□□□ 1.84
RXRBP28702 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC26.54■■□□□ 1.84
RXRBP28702 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
RXRBP28702 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
RXRBP28702 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
RXRBP28702 C1QL1P1-201ENST00000568105 661 ntBASIC26.54■■□□□ 1.84
RXRBP28702 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
RXRBP28702 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC26.53■■□□□ 1.84
RXRBP28702 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
RXRBP28702 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC26.53■■□□□ 1.84
RXRBP28702 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC26.53■■□□□ 1.84
RXRBP28702 AL512604.3-201ENST00000569583 964 ntBASIC26.53■■□□□ 1.84
RXRBP28702 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC26.53■■□□□ 1.84
RXRBP28702 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC26.53■■□□□ 1.84
RXRBP28702 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
RXRBP28702 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
RXRBP28702 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC26.53■■□□□ 1.84
RXRBP28702 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
RXRBP28702 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
RXRBP28702 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
RXRBP28702 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC26.53■■□□□ 1.84
RXRBP28702 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
RXRBP28702 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
RXRBP28702 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
RXRBP28702 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC26.52■■□□□ 1.84
RXRBP28702 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
RXRBP28702 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
RXRBP28702 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
RXRBP28702 ETFA-216ENST00000560726 942 ntTSL 3 BASIC26.52■■□□□ 1.84
RXRBP28702 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC26.52■■□□□ 1.84
RXRBP28702 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC26.52■■□□□ 1.84
RXRBP28702 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC26.52■■□□□ 1.84
RXRBP28702 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
RXRBP28702 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
RXRBP28702 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
RXRBP28702 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC26.51■■□□□ 1.83
RXRBP28702 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
RXRBP28702 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
RXRBP28702 AC092338.2-201ENST00000568827 1415 ntBASIC26.51■■□□□ 1.83
RXRBP28702 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
RXRBP28702 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
RXRBP28702 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
RXRBP28702 HLA-G-203ENST00000376818 1127 ntBASIC26.51■■□□□ 1.83
RXRBP28702 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC26.51■■□□□ 1.83
RXRBP28702 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC26.51■■□□□ 1.83
RXRBP28702 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC26.51■■□□□ 1.83
RXRBP28702 AC131212.4-201ENST00000623606 975 ntBASIC26.51■■□□□ 1.83
RXRBP28702 DFFB-212ENST00000625756 649 ntTSL 5 BASIC26.51■■□□□ 1.83
RXRBP28702 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC26.51■■□□□ 1.83
RXRBP28702 AC026471.6-201ENST00000622954 1905 ntBASIC26.51■■□□□ 1.83
RXRBP28702 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
RXRBP28702 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
RXRBP28702 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC26.5■■□□□ 1.83
RXRBP28702 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC26.5■■□□□ 1.83
RXRBP28702 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
RXRBP28702 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC26.5■■□□□ 1.83
RXRBP28702 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC26.5■■□□□ 1.83
RXRBP28702 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
RXRBP28702 AC092329.2-201ENST00000598402 547 ntBASIC26.5■■□□□ 1.83
RXRBP28702 AC083849.1-201ENST00000615227 514 ntBASIC26.5■■□□□ 1.83
RXRBP28702 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC26.5■■□□□ 1.83
RXRBP28702 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC26.5■■□□□ 1.83
RXRBP28702 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
RXRBP28702 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
RXRBP28702 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
RXRBP28702 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
RXRBP28702 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC26.49■■□□□ 1.83
RXRBP28702 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
RXRBP28702 MFAP1P1-201ENST00000442257 1255 ntBASIC26.49■■□□□ 1.83
RXRBP28702 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC26.49■■□□□ 1.83
RXRBP28702 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC26.49■■□□□ 1.83
RXRBP28702 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC26.49■■□□□ 1.83
RXRBP28702 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
RXRBP28702 AC010542.4-201ENST00000563151 1910 ntBASIC26.49■■□□□ 1.83
RXRBP28702 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC26.49■■□□□ 1.83
RXRBP28702 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
RXRBP28702 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
RXRBP28702 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
RXRBP28702 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
RXRBP28702 AC112907.2-201ENST00000448639 330 ntBASIC26.48■■□□□ 1.83
RXRBP28702 SNX5-210ENST00000481323 562 ntTSL 3 BASIC26.48■■□□□ 1.83
RXRBP28702 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC26.48■■□□□ 1.83
RXRBP28702 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC26.48■■□□□ 1.83
RXRBP28702 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC26.48■■□□□ 1.83
RXRBP28702 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
RXRBP28702 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC26.48■■□□□ 1.83
RXRBP28702 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
RXRBP28702 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
RXRBP28702 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
RXRBP28702 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC26.47■■□□□ 1.83
RXRBP28702 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms