Protein–RNA interactions for Protein: P25847

MSH2, DNA mismatch repair protein MSH2, yeastyeast

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH2P25847 SXM1YDR395W 2835 nt1.71□□□□□ -2.14
MSH2P25847 STO1YMR125W 2586 nt1.7□□□□□ -2.14
MSH2P25847 EST2YLR318W 2655 nt1.7□□□□□ -2.14
MSH2P25847 YBR131C-AYBR131C-A 90 nt1.69□□□□□ -2.14
MSH2P25847 MSN5YDR335W 3675 nt1.69□□□□□ -2.14
MSH2P25847 YBR221W-AYBR221W-A 105 nt1.68□□□□□ -2.14
MSH2P25847 MDS3YGL197W 4464 nt1.68□□□□□ -2.14
MSH2P25847 NUP145YGL092W 3954 nt1.67□□□□□ -2.14
MSH2P25847 APL1YJR005W 2103 nt1.67□□□□□ -2.14
MSH2P25847 YNL097C-BYNL097C-B 123 nt1.67□□□□□ -2.14
MSH2P25847 YJL026C-AYJL026C-A 222 nt1.66□□□□□ -2.14
MSH2P25847 CDC31YOR257W 486 nt1.66□□□□□ -2.14
MSH2P25847 YOR345CYOR345C 351 nt1.66□□□□□ -2.14
MSH2P25847 APL3YBL037W 3078 nt1.66□□□□□ -2.14
MSH2P25847 POL5YEL055C 3069 nt1.64□□□□□ -2.15
MSH2P25847 ROM2YLR371W 4071 nt1.64□□□□□ -2.15
MSH2P25847 FIG2YCR089W 4830 nt1.64□□□□□ -2.15
MSH2P25847 WAR1YML076C 2835 nt1.64□□□□□ -2.15
MSH2P25847 NUP188YML103C 4968 nt1.64□□□□□ -2.15
MSH2P25847 TRM732YMR259C 4263 nt1.63□□□□□ -2.15
MSH2P25847 YBR200W-AYBR200W-A 165 nt1.63□□□□□ -2.15
MSH2P25847 CHS1YNL192W 3396 nt1.62□□□□□ -2.15
MSH2P25847 EAF1YDR359C 2949 nt1.62□□□□□ -2.15
MSH2P25847 PIK1YNL267W 3201 nt1.62□□□□□ -2.15
MSH2P25847 SPC110YDR356W 2835 nt1.62□□□□□ -2.15
MSH2P25847 Q0032Q0032 291 nt1.62□□□□□ -2.15
MSH2P25847 PAA1YDR071C 576 nt1.62□□□□□ -2.15
MSH2P25847 YAL067W-AYAL067W-A 228 nt1.62□□□□□ -2.15
MSH2P25847 RSM22YKL155C 1887 nt1.62□□□□□ -2.15
MSH2P25847 CAT8YMR280C 4302 nt1.61□□□□□ -2.15
MSH2P25847 YLL020CYLL020C 306 nt1.61□□□□□ -2.15
MSH2P25847 YNL198CYNL198C 303 nt1.6□□□□□ -2.15
MSH2P25847 YNL211CYNL211C 261 nt1.6□□□□□ -2.15
MSH2P25847 SEC3YER008C 4011 nt1.6□□□□□ -2.15
MSH2P25847 TTI1YKL033W 3117 nt1.59□□□□□ -2.15
MSH2P25847 YJL182CYJL182C 318 nt1.59□□□□□ -2.15
MSH2P25847 SSK2YNR031C 4740 nt1.59□□□□□ -2.16
MSH2P25847 YGL007C-AYGL007C-A 87 nt1.58□□□□□ -2.16
MSH2P25847 snR46snR46 197 nt1.58□□□□□ -2.16
MSH2P25847 CDC25YLR310C 4770 nt1.58□□□□□ -2.16
MSH2P25847 HAL9YOL089C 3093 nt1.58□□□□□ -2.16
MSH2P25847 CMC4YMR194C-B 222 nt1.57□□□□□ -2.16
MSH2P25847 RPS30BYOR182C 192 nt1.57□□□□□ -2.16
MSH2P25847 RPL33BYOR234C 324 nt1.57□□□□□ -2.16
MSH2P25847 YGR130CYGR130C 2451 nt1.56□□□□□ -2.16
MSH2P25847 YLR466C-BYLR466C-B 117 nt1.56□□□□□ -2.16
MSH2P25847 NOP9YJL010C 2001 nt1.56□□□□□ -2.16
MSH2P25847 PET127YOR017W 2403 nt1.55□□□□□ -2.16
MSH2P25847 YGR151CYGR151C 336 nt1.55□□□□□ -2.16
MSH2P25847 YJL150WYJL150W 303 nt1.55□□□□□ -2.16
MSH2P25847 YOR225WYOR225W 330 nt1.55□□□□□ -2.16
MSH2P25847 snR52snR52 92 nt1.55□□□□□ -2.16
MSH2P25847 CCH1YGR217W 6120 nt1.54□□□□□ -2.16
MSH2P25847 LAA1YJL207C 6045 nt1.54□□□□□ -2.16
MSH2P25847 FYV8YGR196C 2454 nt1.53□□□□□ -2.16
MSH2P25847 COX12YLR038C 252 nt1.53□□□□□ -2.16
MSH2P25847 YLR342W-AYLR342W-A 174 nt1.53□□□□□ -2.16
MSH2P25847 YPL044CYPL044C 549 nt1.53□□□□□ -2.16
MSH2P25847 GEA2YEL022W 4380 nt1.52□□□□□ -2.17
MSH2P25847 COY1YKL179C 2040 nt1.52□□□□□ -2.17
MSH2P25847 SEC21YNL287W 2808 nt1.52□□□□□ -2.17
MSH2P25847 NUP157YER105C 4176 nt1.52□□□□□ -2.17
MSH2P25847 HKR1YDR420W 5409 nt1.51□□□□□ -2.17
MSH2P25847 tQ(UUG)E2tQ(UUG)E2 72 nt1.51□□□□□ -2.17
MSH2P25847 YIL134C-AYIL134C-A 204 nt1.51□□□□□ -2.17
MSH2P25847 STB6YKL072W 2301 nt1.51□□□□□ -2.17
MSH2P25847 MSH3YCR092C 3057 nt1.5□□□□□ -2.17
MSH2P25847 YCR038W-AYCR038W-A 126 nt1.49□□□□□ -2.17
MSH2P25847 YEL073CYEL073C 324 nt1.49□□□□□ -2.17
MSH2P25847 YGL123C-AYGL123C-A 231 nt1.49□□□□□ -2.17
MSH2P25847 RPL26BYGR034W 384 nt1.49□□□□□ -2.17
MSH2P25847 YKL100W-AYKL100W-A 90 nt1.49□□□□□ -2.17
MSH2P25847 PRP39YML046W 1890 nt1.48□□□□□ -2.17
MSH2P25847 YIL002W-AYIL002W-A 210 nt1.47□□□□□ -2.17
MSH2P25847 PAU12YGR294W 363 nt1.46□□□□□ -2.18
MSH2P25847 PAU24YBR301W 363 nt1.46□□□□□ -2.18
MSH2P25847 CDC39YCR093W 6327 nt1.46□□□□□ -2.18
MSH2P25847 PMP1YCR024C-A 123 nt1.45□□□□□ -2.18
MSH2P25847 COX5BYIL111W 456 nt1.44□□□□□ -2.18
MSH2P25847 YLR282CYLR282C 342 nt1.44□□□□□ -2.18
MSH2P25847 TRS65YGR166W 1683 nt1.43□□□□□ -2.18
MSH2P25847 YOR161W-AYOR161W-A 81 nt1.42□□□□□ -2.18
MSH2P25847 tH(GUG)E1tH(GUG)E1 72 nt1.41□□□□□ -2.18
MSH2P25847 tH(GUG)E2tH(GUG)E2 72 nt1.41□□□□□ -2.18
MSH2P25847 tH(GUG)G1tH(GUG)G1 72 nt1.41□□□□□ -2.18
MSH2P25847 tH(GUG)G2tH(GUG)G2 72 nt1.41□□□□□ -2.18
MSH2P25847 tH(GUG)HtH(GUG)H 72 nt1.41□□□□□ -2.18
MSH2P25847 tH(GUG)KtH(GUG)K 72 nt1.41□□□□□ -2.18
MSH2P25847 tH(GUG)MtH(GUG)M 72 nt1.41□□□□□ -2.18
MSH2P25847 YFR012W-AYFR012W-A 87 nt1.41□□□□□ -2.18
MSH2P25847 YER053C-AYER053C-A 114 nt1.4□□□□□ -2.19
MSH2P25847 snR190snR190 190 nt1.4□□□□□ -2.19
MSH2P25847 YML002WYML002W 2214 nt1.4□□□□□ -2.19
MSH2P25847 KAP120YPL125W 3099 nt1.39□□□□□ -2.19
MSH2P25847 YNL338WYNL338W 159 nt1.39□□□□□ -2.19
MSH2P25847 ASE1YOR058C 2658 nt1.38□□□□□ -2.19
MSH2P25847 UTP8YGR128C 2142 nt1.38□□□□□ -2.19
MSH2P25847 YLR294CYLR294C 330 nt1.38□□□□□ -2.19
MSH2P25847 YOR381W-AYOR381W-A 168 nt1.38□□□□□ -2.19
MSH2P25847 PRP42YDR235W 1635 nt1.37□□□□□ -2.19
Retrieved 100 of 7,029 protein–RNA pairs in 29.2 ms