Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
CHMP24386 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHMP24386 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CHMP24386 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.68■□□□□ 0.58
CHMP24386 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHMP24386 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHMP24386 GUSBP6-202ENST00000438529 1198 ntBASIC18.68■□□□□ 0.58
CHMP24386 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CHMP24386 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.68■□□□□ 0.58
CHMP24386 AC016405.3-201ENST00000607710 860 ntBASIC18.68■□□□□ 0.58
CHMP24386 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.68■□□□□ 0.58
CHMP24386 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
CHMP24386 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHMP24386 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHMP24386 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHMP24386 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
CHMP24386 AC087289.5-201ENST00000586076 3175 ntBASIC18.68■□□□□ 0.58
CHMP24386 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHMP24386 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CHMP24386 SMG8-203ENST00000578922 2178 ntBASIC18.68■□□□□ 0.58
CHMP24386 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.68■□□□□ 0.58
CHMP24386 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CHMP24386 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CHMP24386 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP24386 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.67■□□□□ 0.58
CHMP24386 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP24386 AL355802.2-201ENST00000402069 882 ntBASIC18.67■□□□□ 0.58
CHMP24386 AC007322.3-201ENST00000426526 701 ntBASIC18.67■□□□□ 0.58
CHMP24386 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.67■□□□□ 0.58
CHMP24386 AC142086.2-201ENST00000569753 217 ntBASIC18.67■□□□□ 0.58
CHMP24386 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP24386 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP24386 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP24386 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP24386 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.67■□□□□ 0.58
CHMP24386 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP24386 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
CHMP24386 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.67■□□□□ 0.58
CHMP24386 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP24386 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP24386 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CHMP24386 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP24386 AC116050.2-201ENST00000612102 1779 ntBASIC18.66■□□□□ 0.58
CHMP24386 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.66■□□□□ 0.58
CHMP24386 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP24386 MKRN4P-201ENST00000444706 1521 ntBASIC18.66■□□□□ 0.58
CHMP24386 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CHMP24386 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
CHMP24386 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.66■□□□□ 0.58
CHMP24386 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP24386 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.66■□□□□ 0.58
CHMP24386 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP24386 AC100791.3-201ENST00000617619 330 ntBASIC18.66■□□□□ 0.58
CHMP24386 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.66■□□□□ 0.58
CHMP24386 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP24386 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.66■□□□□ 0.58
CHMP24386 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CHMP24386 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP24386 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP24386 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP24386 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP24386 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CHMP24386 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CHMP24386 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CHMP24386 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.65■□□□□ 0.58
CHMP24386 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.65■□□□□ 0.58
CHMP24386 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP24386 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.65■□□□□ 0.58
CHMP24386 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CHMP24386 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.64■□□□□ 0.58
CHMP24386 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.64■□□□□ 0.58
CHMP24386 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CHMP24386 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CHMP24386 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CHMP24386 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CHMP24386 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CHMP24386 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.58
CHMP24386 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
CHMP24386 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.64■□□□□ 0.57
CHMP24386 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP24386 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP24386 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CHMP24386 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP24386 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CHMP24386 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CHMP24386 AC093787.1-201ENST00000450396 207 ntBASIC18.64■□□□□ 0.57
CHMP24386 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.64■□□□□ 0.57
CHMP24386 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.64■□□□□ 0.57
CHMP24386 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
CHMP24386 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.64■□□□□ 0.57
CHMP24386 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.64■□□□□ 0.57
CHMP24386 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.64■□□□□ 0.57
CHMP24386 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP24386 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP24386 AC010980.2-201ENST00000587099 1412 ntBASIC18.64■□□□□ 0.57
CHMP24386 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.64■□□□□ 0.57
CHMP24386 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP24386 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.64■□□□□ 0.57
CHMP24386 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
CHMP24386 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms