Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.184e-7■■■■□ 23.4
RPS3P23396 ACY1-204ENST00000468068 654 ntTSL 414.68□□□□□ -0.068e-11■■■■□ 23.4
RPS3P23396 ACY1-214ENST00000636047 596 ntTSL 513.47□□□□□ -0.258e-11■■■■□ 23.4
RPS3P23396 ABHD14A-ACY1-213ENST00000636264 516 ntTSL 513.35□□□□□ -0.278e-11■■■■□ 23.4
RPS3P23396 SND1-213ENST00000486037 695 ntTSL 39.28□□□□□ -0.922e-8■■■■□ 23.4
RPS3P23396 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -02e-7■■■■□ 23.4
RPS3P23396 AKR1A1-207ENST00000475985 335 ntTSL 23.29□□□□□ -1.882e-9■■■■□ 23.4
RPS3P23396 DCAF13-206ENST00000521999 779 ntTSL 512.77□□□□□ -0.378e-7■■■■□ 23.4
RPS3P23396 EMP3-207ENST00000597529 437 ntTSL 29.7□□□□□ -0.862e-6■■■■□ 23.4
RPS3P23396 ITIH3-204ENST00000464804 543 ntTSL 416.24■□□□□ 0.195e-11■■■■□ 23.4
RPS3P23396 ALDH4A1-204ENST00000454547 485 ntTSL 212.15□□□□□ -0.461e-6■■■■□ 23.4
RPS3P23396 MAGED1-208ENST00000482599 341 ntTSL 511.05□□□□□ -0.646e-11■■■■□ 23.4
RPS3P23396 GOT2-203ENST00000492378 987 ntTSL 212.09□□□□□ -0.473e-7■■■■□ 23.4
RPS3P23396 GOT2-207ENST00000568368 516 ntTSL 412.03□□□□□ -0.483e-7■■■■□ 23.4
RPS3P23396 MAD2L1-202ENST00000333047 1277 ntTSL 1 (best)15.73■□□□□ 0.114e-7■■■■□ 23.4
RPS3P23396 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.34e-7■■■■□ 23.4
RPS3P23396 TMBIM6-224ENST00000551154 423 ntTSL 213.68□□□□□ -0.224e-8■■■■□ 23.4
RPS3P23396 TMBIM6-223ENST00000550951 533 ntTSL 313.47□□□□□ -0.254e-8■■■■□ 23.4
RPS3P23396 NUCB1-204ENST00000424608 884 ntAPPRIS ALT2 TSL 519.6■□□□□ 0.731e-7■■■■□ 23.4
RPS3P23396 ILVBL-210ENST00000534806 1033 ntTSL 512.63□□□□□ -0.394e-7■■■■□ 23.4
RPS3P23396 TKFC-221ENST00000534370 360 ntTSL 211.6□□□□□ -0.555e-11■■■■□ 23.4
RPS3P23396 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.24e-7■■■■□ 23.4
RPS3P23396 DGAT2-206ENST00000604733 885 ntTSL 1 (best)16.09■□□□□ 0.174e-6■■■■□ 23.4
RPS3P23396 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.311e-6■■■■□ 23.4
RPS3P23396 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.271e-6■■■■□ 23.4
RPS3P23396 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.161e-6■■■■□ 23.4
RPS3P23396 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.64e-7■■■■□ 23.4
RPS3P23396 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.363e-7■■■■□ 23.4
RPS3P23396 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.59■□□□□ 0.253e-7■■■■□ 23.4
RPS3P23396 AK2-213ENST00000551979 581 ntTSL 213.41□□□□□ -0.262e-7■■■■□ 23.4
RPS3P23396 AK2-208ENST00000487289 920 ntTSL 2 BASIC13.21□□□□□ -0.292e-7■■■■□ 23.4
RPS3P23396 AK2-206ENST00000480134 811 ntTSL 2 BASIC12.17□□□□□ -0.464e-7■■■■□ 23.4
RPS3P23396 AK2-212ENST00000550338 886 ntTSL 212.17□□□□□ -0.464e-7■■■■□ 23.4
RPS3P23396 AK2-202ENST00000373449 3586 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.73e-7■■■■□ 23.4
RPS3P23396 AK2-215ENST00000629371 3576 ntTSL 3 BASIC10.45□□□□□ -0.743e-7■■■■□ 23.4
RPS3P23396 AK2-214ENST00000626911 160 ntTSL 3 BASIC9.61□□□□□ -0.872e-7■■■■□ 23.4
RPS3P23396 AK2-211ENST00000548559 530 ntTSL 48.61□□□□□ -1.032e-7■■■■□ 23.4
RPS3P23396 ENO1-203ENST00000486051 536 ntTSL 35.99□□□□□ -1.452e-44■■■■□ 23.4
RPS3P23396 GLB1-219ENST00000498537 570 ntTSL 414.75□□□□□ -0.056e-8■■■■□ 23.3
RPS3P23396 GLB1-204ENST00000415454 591 ntTSL 49.64□□□□□ -0.876e-8■■■■□ 23.3
RPS3P23396 GLB1-216ENST00000485698 550 ntTSL 47.17□□□□□ -1.266e-8■■■■□ 23.3
RPS3P23396 GLB1-215ENST00000482097 547 ntTSL 57.17□□□□□ -1.266e-8■■■■□ 23.3
RPS3P23396 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.213e-9■■■■□ 23.3
RPS3P23396 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.05■□□□□ 0.643e-9■■■■□ 23.3
RPS3P23396 AC011448.1-202ENST00000586674 1071 ntTSL 218.53■□□□□ 0.563e-9■■■■□ 23.3
RPS3P23396 NDUFA13-202ENST00000502506 1166 ntTSL 215.58■□□□□ 0.083e-9■■■■□ 23.3
RPS3P23396 NDUFA13-207ENST00000606722 502 ntTSL 312.38□□□□□ -0.433e-9■■■■□ 23.3
RPS3P23396 NDUFA13-204ENST00000507754 991 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.63e-9■■■■□ 23.3
RPS3P23396 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC23.26■■□□□ 1.312e-7■■■■□ 23.3
RPS3P23396 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC23.26■■□□□ 1.312e-7■■■■□ 23.3
RPS3P23396 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.852e-7■■■■□ 23.3
RPS3P23396 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.812e-7■■■■□ 23.3
RPS3P23396 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.662e-7■■■■□ 23.3
RPS3P23396 RFXANK-204ENST00000421262 856 ntTSL 523.85■■□□□ 1.415e-6■■■■□ 23.3
RPS3P23396 RFXANK-214ENST00000545522 888 ntTSL 220.18■□□□□ 0.825e-6■■■■□ 23.3
RPS3P23396 RFXANK-215ENST00000593273 865 ntTSL 318.85■□□□□ 0.615e-6■■■■□ 23.3
RPS3P23396 RFXANK-212ENST00000543157 919 ntTSL 217.27■□□□□ 0.365e-6■■■■□ 23.3
RPS3P23396 PSMC2-201ENST00000292644 2637 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.074e-7■■■■□ 23.3
RPS3P23396 PSMC2-203ENST00000435765 3054 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.184e-7■■■■□ 23.3
RPS3P23396 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC22.54■■□□□ 1.22e-10■■■■□ 23.3
RPS3P23396 TMED4-204ENST00000477639 1950 ntTSL 220.36■□□□□ 0.852e-10■■■■□ 23.3
RPS3P23396 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.832e-10■■■■□ 23.3
RPS3P23396 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.86■□□□□ 0.772e-10■■■■□ 23.3
RPS3P23396 TMED4-202ENST00000444131 545 ntTSL 417.89■□□□□ 0.452e-10■■■■□ 23.3
RPS3P23396 ATP5O-204ENST00000429064 442 ntTSL 34.84□□□□□ -1.633e-7■■■■□ 23.3
RPS3P23396 ATP5O-202ENST00000417181 462 ntTSL 34.09□□□□□ -1.753e-7■■■■□ 23.3
RPS3P23396 HIST1H2AC-201ENST00000314088 1668 ntTSL 1 (best)17.23■□□□□ 0.351e-28■■■■□ 23.3
RPS3P23396 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.191e-28■■■■□ 23.3
RPS3P23396 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.021e-28■■■■□ 23.3
RPS3P23396 SLC39A1-206ENST00000417348 912 ntTSL 319■□□□□ 0.633e-8■■■■□ 23.3
RPS3P23396 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.86■□□□□ 0.613e-8■■■■□ 23.3
RPS3P23396 SLC39A1-205ENST00000413622 1030 ntTSL 318.23■□□□□ 0.513e-8■■■■□ 23.3
RPS3P23396 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.423e-8■■■■□ 23.3
RPS3P23396 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.333e-8■■■■□ 23.3
RPS3P23396 SLC39A1-207ENST00000429040 1141 ntTSL 216.74■□□□□ 0.273e-8■■■■□ 23.3
RPS3P23396 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.163e-8■■■■□ 23.3
RPS3P23396 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.153e-8■■■■□ 23.3
RPS3P23396 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.033e-8■■■■□ 23.3
RPS3P23396 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.043e-8■■■■□ 23.3
RPS3P23396 CPOX-205ENST00000515041 1030 ntTSL 223.84■■□□□ 1.414e-8■■■■□ 23.3
RPS3P23396 CPOX-204ENST00000513674 826 ntTSL 522.31■■□□□ 1.164e-8■■■■□ 23.3
RPS3P23396 HUWE1-202ENST00000262854 14739 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.762e-6■■■■□ 23.3
RPS3P23396 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.32e-6■■■■□ 23.3
RPS3P23396 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.54□□□□□ -1.522e-6■■■■□ 23.3
RPS3P23396 P4HA2-212ENST00000428841 427 ntTSL 36.85□□□□□ -1.312e-6■■■■□ 23.3
RPS3P23396 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.366e-7■■■■□ 23.3
RPS3P23396 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC12.13□□□□□ -0.476e-7■■■■□ 23.3
RPS3P23396 ATP5H-203ENST00000538432 533 ntTSL 30.5□□□□□ -2.336e-7■■■■□ 23.3
RPS3P23396 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.13■□□□□ 0.498e-9■■■■□ 23.3
RPS3P23396 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.098e-9■■■■□ 23.3
RPS3P23396 SERPINH1-202ENST00000524558 3391 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.53e-7■■■■□ 23.3
RPS3P23396 ALDOA-216ENST00000566012 553 ntTSL 513.37□□□□□ -0.274e-60■■■■□ 23.3
RPS3P23396 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.9■□□□□ 0.621e-6■■■■□ 23.3
RPS3P23396 SLC47A1-205ENST00000497548 1900 ntTSL 217.35■□□□□ 0.371e-6■■■■□ 23.3
RPS3P23396 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.89■□□□□ 0.291e-6■■■■□ 23.3
RPS3P23396 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.6■□□□□ 0.091e-6■■■■□ 23.3
RPS3P23396 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC13.89□□□□□ -0.191e-6■■■■□ 23.3
RPS3P23396 SLC47A1-201ENST00000270570 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.391e-6■■■■□ 23.3
RPS3P23396 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.066e-16■■■■□ 23.3
RPS3P23396 OSTC-203ENST00000510556 331 ntTSL 57.23□□□□□ -1.256e-16■■■■□ 23.3
Retrieved 100 of 24,271 protein–RNA pairs in 174.8 ms