Protein–RNA interactions for Protein: P20436

RPB8, DNA-directed RNA polymerases I, II, and III subunit RPABC3, yeastyeast

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPB8P20436 SXM1YDR395W 2835 nt1.33□□□□□ -2.2
RPB8P20436 NUP192YJL039C 5052 nt1.33□□□□□ -2.2
RPB8P20436 MSN5YDR335W 3675 nt1.33□□□□□ -2.2
RPB8P20436 AIM44YPL158C 2277 nt1.32□□□□□ -2.2
RPB8P20436 YOR345CYOR345C 351 nt1.32□□□□□ -2.2
RPB8P20436 NUP188YML103C 4968 nt1.32□□□□□ -2.2
RPB8P20436 CAT8YMR280C 4302 nt1.31□□□□□ -2.2
RPB8P20436 BRR2YER172C 6492 nt1.31□□□□□ -2.2
RPB8P20436 FIG4YNL325C 2640 nt1.31□□□□□ -2.2
RPB8P20436 ANS1YHR126C 480 nt1.31□□□□□ -2.2
RPB8P20436 SSK2YNR031C 4740 nt1.31□□□□□ -2.2
RPB8P20436 EST2YLR318W 2655 nt1.31□□□□□ -2.2
RPB8P20436 HAL9YOL089C 3093 nt1.3□□□□□ -2.2
RPB8P20436 CDC31YOR257W 486 nt1.3□□□□□ -2.2
RPB8P20436 YBR221W-AYBR221W-A 105 nt1.3□□□□□ -2.2
RPB8P20436 STO1YMR125W 2586 nt1.3□□□□□ -2.2
RPB8P20436 YNL198CYNL198C 303 nt1.29□□□□□ -2.2
RPB8P20436 snR46snR46 197 nt1.29□□□□□ -2.2
RPB8P20436 CDC39YCR093W 6327 nt1.29□□□□□ -2.2
RPB8P20436 ULI1YFR026C 510 nt1.28□□□□□ -2.2
RPB8P20436 YGL007C-AYGL007C-A 87 nt1.28□□□□□ -2.2
RPB8P20436 tQ(UUG)E2tQ(UUG)E2 72 nt1.28□□□□□ -2.2
RPB8P20436 YIL134C-AYIL134C-A 204 nt1.28□□□□□ -2.2
RPB8P20436 YJL150WYJL150W 303 nt1.27□□□□□ -2.21
RPB8P20436 CCH1YGR217W 6120 nt1.26□□□□□ -2.21
RPB8P20436 SEC3YER008C 4011 nt1.26□□□□□ -2.21
RPB8P20436 YEL014CYEL014C 306 nt1.26□□□□□ -2.21
RPB8P20436 YNL211CYNL211C 261 nt1.26□□□□□ -2.21
RPB8P20436 ROM2YLR371W 4071 nt1.25□□□□□ -2.21
RPB8P20436 PAA1YDR071C 576 nt1.25□□□□□ -2.21
RPB8P20436 YJL182CYJL182C 318 nt1.25□□□□□ -2.21
RPB8P20436 YAL067W-AYAL067W-A 228 nt1.25□□□□□ -2.21
RPB8P20436 RPL33BYOR234C 324 nt1.25□□□□□ -2.21
RPB8P20436 AZF1YOR113W 2745 nt1.24□□□□□ -2.21
RPB8P20436 NUP145YGL092W 3954 nt1.24□□□□□ -2.21
RPB8P20436 Q0032Q0032 291 nt1.24□□□□□ -2.21
RPB8P20436 YLL020CYLL020C 306 nt1.24□□□□□ -2.21
RPB8P20436 CLU1YMR012W 3834 nt1.24□□□□□ -2.21
RPB8P20436 APL1YJR005W 2103 nt1.24□□□□□ -2.21
RPB8P20436 COY1YKL179C 2040 nt1.23□□□□□ -2.21
RPB8P20436 STB6YKL072W 2301 nt1.23□□□□□ -2.21
RPB8P20436 EAF1YDR359C 2949 nt1.23□□□□□ -2.21
RPB8P20436 SEC21YNL287W 2808 nt1.23□□□□□ -2.21
RPB8P20436 RPS30BYOR182C 192 nt1.23□□□□□ -2.21
RPB8P20436 NST1YNL091W 3723 nt1.22□□□□□ -2.21
RPB8P20436 CDC25YLR310C 4770 nt1.22□□□□□ -2.21
RPB8P20436 ASE1YOR058C 2658 nt1.22□□□□□ -2.21
RPB8P20436 COX12YLR038C 252 nt1.22□□□□□ -2.21
RPB8P20436 YLR466C-BYLR466C-B 117 nt1.22□□□□□ -2.21
RPB8P20436 YBR200W-AYBR200W-A 165 nt1.21□□□□□ -2.22
RPB8P20436 WAR1YML076C 2835 nt1.21□□□□□ -2.22
RPB8P20436 NUP157YER105C 4176 nt1.21□□□□□ -2.22
RPB8P20436 TTI1YKL033W 3117 nt1.21□□□□□ -2.22
RPB8P20436 RSM22YKL155C 1887 nt1.2□□□□□ -2.22
RPB8P20436 FYV8YGR196C 2454 nt1.2□□□□□ -2.22
RPB8P20436 PET127YOR017W 2403 nt1.2□□□□□ -2.22
RPB8P20436 KAP120YPL125W 3099 nt1.2□□□□□ -2.22
RPB8P20436 NOP9YJL010C 2001 nt1.2□□□□□ -2.22
RPB8P20436 PRP39YML046W 1890 nt1.19□□□□□ -2.22
RPB8P20436 CMC4YMR194C-B 222 nt1.19□□□□□ -2.22
RPB8P20436 PMP1YCR024C-A 123 nt1.18□□□□□ -2.22
RPB8P20436 YGR151CYGR151C 336 nt1.18□□□□□ -2.22
RPB8P20436 MSH3YCR092C 3057 nt1.18□□□□□ -2.22
RPB8P20436 YFR012W-AYFR012W-A 87 nt1.17□□□□□ -2.22
RPB8P20436 tH(GUG)E1tH(GUG)E1 72 nt1.16□□□□□ -2.22
RPB8P20436 tH(GUG)E2tH(GUG)E2 72 nt1.16□□□□□ -2.22
RPB8P20436 tH(GUG)G1tH(GUG)G1 72 nt1.16□□□□□ -2.22
RPB8P20436 tH(GUG)G2tH(GUG)G2 72 nt1.16□□□□□ -2.22
RPB8P20436 tH(GUG)HtH(GUG)H 72 nt1.16□□□□□ -2.22
RPB8P20436 tH(GUG)KtH(GUG)K 72 nt1.16□□□□□ -2.22
RPB8P20436 tH(GUG)MtH(GUG)M 72 nt1.16□□□□□ -2.22
RPB8P20436 snR52snR52 92 nt1.16□□□□□ -2.22
RPB8P20436 YCR038W-AYCR038W-A 126 nt1.15□□□□□ -2.23
RPB8P20436 YLR342W-AYLR342W-A 174 nt1.15□□□□□ -2.23
RPB8P20436 YIL002W-AYIL002W-A 210 nt1.14□□□□□ -2.23
RPB8P20436 TRS65YGR166W 1683 nt1.13□□□□□ -2.23
RPB8P20436 GEA2YEL022W 4380 nt1.13□□□□□ -2.23
RPB8P20436 YGL123C-AYGL123C-A 231 nt1.13□□□□□ -2.23
RPB8P20436 YPL044CYPL044C 549 nt1.13□□□□□ -2.23
RPB8P20436 YLR294CYLR294C 330 nt1.12□□□□□ -2.23
RPB8P20436 YOR161W-AYOR161W-A 81 nt1.12□□□□□ -2.23
RPB8P20436 PIK1YNL267W 3201 nt1.12□□□□□ -2.23
RPB8P20436 YER053C-AYER053C-A 114 nt1.11□□□□□ -2.23
RPB8P20436 PRP16YKR086W 3216 nt1.11□□□□□ -2.23
RPB8P20436 SMC1YFL008W 3678 nt1.1□□□□□ -2.23
RPB8P20436 LAA1YJL207C 6045 nt1.1□□□□□ -2.23
RPB8P20436 COX5BYIL111W 456 nt1.1□□□□□ -2.23
RPB8P20436 YLR282CYLR282C 342 nt1.1□□□□□ -2.23
RPB8P20436 YEL073CYEL073C 324 nt1.09□□□□□ -2.23
RPB8P20436 RPL26BYGR034W 384 nt1.09□□□□□ -2.23
RPB8P20436 YIL020C-AYIL020C-A 339 nt1.08□□□□□ -2.24
RPB8P20436 RAD9YDR217C 3930 nt1.08□□□□□ -2.24
RPB8P20436 YLR041WYLR041W 321 nt1.07□□□□□ -2.24
RPB8P20436 YNL338WYNL338W 159 nt1.07□□□□□ -2.24
RPB8P20436 snR190snR190 190 nt1.07□□□□□ -2.24
RPB8P20436 BFR2YDR299W 1605 nt1.07□□□□□ -2.24
RPB8P20436 YGR130CYGR130C 2451 nt1.07□□□□□ -2.24
RPB8P20436 YOR381W-AYOR381W-A 168 nt1.06□□□□□ -2.24
RPB8P20436 YDL073WYDL073W 2955 nt1.05□□□□□ -2.24
RPB8P20436 YKL100W-AYKL100W-A 90 nt1.04□□□□□ -2.24
Retrieved 100 of 7,029 protein–RNA pairs in 18.6 ms