Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC24.72■■□□□ 1.55
COL11A2P13942 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC24.72■■□□□ 1.55
COL11A2P13942 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
COL11A2P13942 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
COL11A2P13942 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC24.71■■□□□ 1.55
COL11A2P13942 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC24.71■■□□□ 1.55
COL11A2P13942 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
COL11A2P13942 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
COL11A2P13942 INGX-201ENST00000359239 846 ntBASIC24.71■■□□□ 1.55
COL11A2P13942 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC24.71■■□□□ 1.55
COL11A2P13942 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
COL11A2P13942 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC24.71■■□□□ 1.55
COL11A2P13942 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
COL11A2P13942 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC24.7■■□□□ 1.55
COL11A2P13942 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
COL11A2P13942 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
COL11A2P13942 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
COL11A2P13942 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC24.7■■□□□ 1.54
COL11A2P13942 CALM3-202ENST00000391918 702 ntTSL 2 BASIC24.7■■□□□ 1.54
COL11A2P13942 YBX1P10-201ENST00000444752 975 ntBASIC24.7■■□□□ 1.54
COL11A2P13942 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
COL11A2P13942 AL445675.2-201ENST00000620291 557 ntBASIC24.7■■□□□ 1.54
COL11A2P13942 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
COL11A2P13942 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC24.7■■□□□ 1.54
COL11A2P13942 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC24.7■■□□□ 1.54
COL11A2P13942 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
COL11A2P13942 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
COL11A2P13942 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC24.7■■□□□ 1.54
COL11A2P13942 GUK1-204ENST00000366721 689 ntTSL 3 BASIC24.69■■□□□ 1.54
COL11A2P13942 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC24.69■■□□□ 1.54
COL11A2P13942 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC24.69■■□□□ 1.54
COL11A2P13942 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
COL11A2P13942 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
COL11A2P13942 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
COL11A2P13942 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
COL11A2P13942 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC24.69■■□□□ 1.54
COL11A2P13942 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC24.69■■□□□ 1.54
COL11A2P13942 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC24.69■■□□□ 1.54
COL11A2P13942 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
COL11A2P13942 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
COL11A2P13942 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
COL11A2P13942 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC24.69■■□□□ 1.54
COL11A2P13942 AC063952.2-201ENST00000498792 1227 ntBASIC24.69■■□□□ 1.54
COL11A2P13942 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
COL11A2P13942 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
COL11A2P13942 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
COL11A2P13942 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
COL11A2P13942 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
COL11A2P13942 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC24.68■■□□□ 1.54
COL11A2P13942 TSPY14P-201ENST00000303979 915 ntBASIC24.68■■□□□ 1.54
COL11A2P13942 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC24.68■■□□□ 1.54
COL11A2P13942 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC24.68■■□□□ 1.54
COL11A2P13942 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
COL11A2P13942 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
COL11A2P13942 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
COL11A2P13942 FSCN1P1-201ENST00000568912 1481 ntBASIC24.67■■□□□ 1.54
COL11A2P13942 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
COL11A2P13942 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
COL11A2P13942 UPK3BP1-201ENST00000428678 509 ntBASIC24.67■■□□□ 1.54
COL11A2P13942 AC011506.1-201ENST00000474329 610 ntBASIC24.67■■□□□ 1.54
COL11A2P13942 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC24.67■■□□□ 1.54
COL11A2P13942 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC24.67■■□□□ 1.54
COL11A2P13942 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC24.67■■□□□ 1.54
COL11A2P13942 FAM87A-204ENST00000613235 858 ntBASIC24.67■■□□□ 1.54
COL11A2P13942 AL358472.4-201ENST00000633140 710 ntBASIC24.67■■□□□ 1.54
COL11A2P13942 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC24.67■■□□□ 1.54
COL11A2P13942 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC24.67■■□□□ 1.54
COL11A2P13942 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC24.67■■□□□ 1.54
COL11A2P13942 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
COL11A2P13942 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
COL11A2P13942 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
COL11A2P13942 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
COL11A2P13942 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC24.67■■□□□ 1.54
COL11A2P13942 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC24.66■■□□□ 1.54
COL11A2P13942 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC24.66■■□□□ 1.54
COL11A2P13942 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
COL11A2P13942 AK4P3-201ENST00000418260 669 ntBASIC24.66■■□□□ 1.54
COL11A2P13942 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
COL11A2P13942 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC24.66■■□□□ 1.54
COL11A2P13942 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
COL11A2P13942 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
COL11A2P13942 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC24.66■■□□□ 1.54
COL11A2P13942 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
COL11A2P13942 KRT8P20-201ENST00000423953 1409 ntBASIC24.66■■□□□ 1.54
COL11A2P13942 ECEL1P1-201ENST00000373592 1742 ntBASIC24.66■■□□□ 1.54
COL11A2P13942 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
COL11A2P13942 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC24.66■■□□□ 1.54
COL11A2P13942 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
COL11A2P13942 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
COL11A2P13942 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
COL11A2P13942 AC117947.1-201ENST00000427448 529 ntBASIC24.66■■□□□ 1.54
COL11A2P13942 FDX2-206ENST00000492239 773 ntTSL 2 BASIC24.66■■□□□ 1.54
COL11A2P13942 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC24.66■■□□□ 1.54
COL11A2P13942 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
COL11A2P13942 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC24.66■■□□□ 1.54
COL11A2P13942 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
COL11A2P13942 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC24.65■■□□□ 1.54
COL11A2P13942 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
COL11A2P13942 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC24.65■■□□□ 1.54
COL11A2P13942 LIN28AP1-201ENST00000429574 405 ntBASIC24.65■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms