Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
CSB-PGBD3P0DP91 SLC25A3P1-201ENST00000443844 931 ntBASIC26.66■■□□□ 1.86
CSB-PGBD3P0DP91 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
CSB-PGBD3P0DP91 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC26.66■■□□□ 1.86
CSB-PGBD3P0DP91 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC26.66■■□□□ 1.86
CSB-PGBD3P0DP91 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
CSB-PGBD3P0DP91 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC26.66■■□□□ 1.86
CSB-PGBD3P0DP91 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
CSB-PGBD3P0DP91 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC26.65■■□□□ 1.86
CSB-PGBD3P0DP91 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC26.65■■□□□ 1.86
CSB-PGBD3P0DP91 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CSB-PGBD3P0DP91 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC26.65■■□□□ 1.86
CSB-PGBD3P0DP91 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CSB-PGBD3P0DP91 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC26.65■■□□□ 1.86
CSB-PGBD3P0DP91 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CSB-PGBD3P0DP91 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC26.65■■□□□ 1.86
CSB-PGBD3P0DP91 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC26.65■■□□□ 1.86
CSB-PGBD3P0DP91 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC26.65■■□□□ 1.86
CSB-PGBD3P0DP91 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
CSB-PGBD3P0DP91 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC26.64■■□□□ 1.86
CSB-PGBD3P0DP91 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC26.64■■□□□ 1.86
CSB-PGBD3P0DP91 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
CSB-PGBD3P0DP91 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC26.64■■□□□ 1.86
CSB-PGBD3P0DP91 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC26.64■■□□□ 1.86
CSB-PGBD3P0DP91 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC26.64■■□□□ 1.86
CSB-PGBD3P0DP91 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
CSB-PGBD3P0DP91 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
CSB-PGBD3P0DP91 RBM42-202ENST00000586618 771 ntTSL 3 BASIC26.64■■□□□ 1.86
CSB-PGBD3P0DP91 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC26.64■■□□□ 1.86
CSB-PGBD3P0DP91 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC26.64■■□□□ 1.86
CSB-PGBD3P0DP91 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
CSB-PGBD3P0DP91 ECEL1P1-201ENST00000373592 1742 ntBASIC26.64■■□□□ 1.85
CSB-PGBD3P0DP91 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
CSB-PGBD3P0DP91 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CSB-PGBD3P0DP91 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CSB-PGBD3P0DP91 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC26.63■■□□□ 1.85
CSB-PGBD3P0DP91 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC26.63■■□□□ 1.85
CSB-PGBD3P0DP91 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
CSB-PGBD3P0DP91 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC26.63■■□□□ 1.85
CSB-PGBD3P0DP91 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC26.63■■□□□ 1.85
CSB-PGBD3P0DP91 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC26.63■■□□□ 1.85
CSB-PGBD3P0DP91 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC26.63■■□□□ 1.85
CSB-PGBD3P0DP91 NTF6B-201ENST00000591913 560 ntBASIC26.63■■□□□ 1.85
CSB-PGBD3P0DP91 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC26.63■■□□□ 1.85
CSB-PGBD3P0DP91 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC26.63■■□□□ 1.85
CSB-PGBD3P0DP91 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC26.63■■□□□ 1.85
CSB-PGBD3P0DP91 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CSB-PGBD3P0DP91 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC26.63■■□□□ 1.85
CSB-PGBD3P0DP91 AC073508.3-201ENST00000619697 1419 ntBASIC26.63■■□□□ 1.85
CSB-PGBD3P0DP91 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CSB-PGBD3P0DP91 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC26.62■■□□□ 1.85
CSB-PGBD3P0DP91 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CSB-PGBD3P0DP91 PTBP1P-201ENST00000554374 1601 ntBASIC26.62■■□□□ 1.85
CSB-PGBD3P0DP91 AC244015.2-201ENST00000616358 1861 ntBASIC26.62■■□□□ 1.85
CSB-PGBD3P0DP91 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CSB-PGBD3P0DP91 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC26.62■■□□□ 1.85
CSB-PGBD3P0DP91 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
CSB-PGBD3P0DP91 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
CSB-PGBD3P0DP91 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
CSB-PGBD3P0DP91 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC26.62■■□□□ 1.85
CSB-PGBD3P0DP91 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CSB-PGBD3P0DP91 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC26.62■■□□□ 1.85
CSB-PGBD3P0DP91 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CSB-PGBD3P0DP91 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC26.61■■□□□ 1.85
CSB-PGBD3P0DP91 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
CSB-PGBD3P0DP91 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC26.61■■□□□ 1.85
CSB-PGBD3P0DP91 DUX4L26-201ENST00000489078 1255 ntBASIC26.61■■□□□ 1.85
CSB-PGBD3P0DP91 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC26.61■■□□□ 1.85
CSB-PGBD3P0DP91 KRT8P20-201ENST00000423953 1409 ntBASIC26.61■■□□□ 1.85
CSB-PGBD3P0DP91 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
CSB-PGBD3P0DP91 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
CSB-PGBD3P0DP91 AC121338.2-201ENST00000622535 1744 ntBASIC26.6■■□□□ 1.85
CSB-PGBD3P0DP91 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CSB-PGBD3P0DP91 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC26.6■■□□□ 1.85
CSB-PGBD3P0DP91 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CSB-PGBD3P0DP91 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC26.6■■□□□ 1.85
CSB-PGBD3P0DP91 AC104076.2-201ENST00000448912 469 ntBASIC26.6■■□□□ 1.85
CSB-PGBD3P0DP91 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC26.6■■□□□ 1.85
CSB-PGBD3P0DP91 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
CSB-PGBD3P0DP91 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC26.6■■□□□ 1.85
CSB-PGBD3P0DP91 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CSB-PGBD3P0DP91 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC26.6■■□□□ 1.85
CSB-PGBD3P0DP91 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CSB-PGBD3P0DP91 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC26.6■■□□□ 1.85
CSB-PGBD3P0DP91 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC26.59■■□□□ 1.85
CSB-PGBD3P0DP91 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC26.59■■□□□ 1.85
CSB-PGBD3P0DP91 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC26.59■■□□□ 1.85
CSB-PGBD3P0DP91 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CSB-PGBD3P0DP91 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
CSB-PGBD3P0DP91 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC26.59■■□□□ 1.85
CSB-PGBD3P0DP91 CALM3-202ENST00000391918 702 ntTSL 2 BASIC26.59■■□□□ 1.85
CSB-PGBD3P0DP91 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
CSB-PGBD3P0DP91 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC26.59■■□□□ 1.85
CSB-PGBD3P0DP91 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC26.59■■□□□ 1.85
CSB-PGBD3P0DP91 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CSB-PGBD3P0DP91 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CSB-PGBD3P0DP91 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC26.58■■□□□ 1.85
CSB-PGBD3P0DP91 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CSB-PGBD3P0DP91 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC26.58■■□□□ 1.85
CSB-PGBD3P0DP91 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms