Protein–RNA interactions for Protein: P0CX38

RPS6B, 40S ribosomal protein S6-B, yeastyeast

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPS6BP0CX38 NUP170YBL079W 4509 nt2.45□□□□□ -2.02
RPS6BP0CX38 MDS3YGL197W 4464 nt2.44□□□□□ -2.02
RPS6BP0CX38 YOR343W-BYOR343W-B 5313 nt2.44□□□□□ -2.02
RPS6BP0CX38 YHR131W-AYHR131W-A 246 nt2.43□□□□□ -2.02
RPS6BP0CX38 YLL066W-BYLL066W-B 171 nt2.42□□□□□ -2.02
RPS6BP0CX38 TBS1YBR150C 3285 nt2.42□□□□□ -2.02
RPS6BP0CX38 RSM22YKL155C 1887 nt2.41□□□□□ -2.02
RPS6BP0CX38 SFB2YNL049C 2631 nt2.41□□□□□ -2.02
RPS6BP0CX38 snR39BsnR39B 96 nt2.41□□□□□ -2.02
RPS6BP0CX38 HIR3YJR140C 4947 nt2.41□□□□□ -2.02
RPS6BP0CX38 SEY1YOR165W 2331 nt2.41□□□□□ -2.02
RPS6BP0CX38 SEC63YOR254C 1992 nt2.4□□□□□ -2.02
RPS6BP0CX38 YER172C-AYER172C-A 381 nt2.4□□□□□ -2.03
RPS6BP0CX38 EAF1YDR359C 2949 nt2.4□□□□□ -2.03
RPS6BP0CX38 RCO1YMR075W 2055 nt2.4□□□□□ -2.03
RPS6BP0CX38 YPR097WYPR097W 3222 nt2.4□□□□□ -2.03
RPS6BP0CX38 NUT1YGL151W 3399 nt2.39□□□□□ -2.03
RPS6BP0CX38 TRA1YHR099W 11235 nt2.39□□□□□ -2.03
RPS6BP0CX38 TIM9YEL020W-A 264 nt2.39□□□□□ -2.03
RPS6BP0CX38 COX5BYIL111W 456 nt2.39□□□□□ -2.03
RPS6BP0CX38 SPO24YPR036W-A 204 nt2.39□□□□□ -2.03
RPS6BP0CX38 YJL052C-AYJL052C-A 120 nt2.38□□□□□ -2.03
RPS6BP0CX38 YOL098CYOL098C 3114 nt2.37□□□□□ -2.03
RPS6BP0CX38 IRA2YOL081W 9240 nt2.37□□□□□ -2.03
RPS6BP0CX38 DGR1YNL130C-A 147 nt2.37□□□□□ -2.03
RPS6BP0CX38 ALY2YJL084C 3141 nt2.36□□□□□ -2.03
RPS6BP0CX38 PAN2YGL094C 3348 nt2.36□□□□□ -2.03
RPS6BP0CX38 TAH1YCR060W 336 nt2.36□□□□□ -2.03
RPS6BP0CX38 YOR161W-AYOR161W-A 81 nt2.36□□□□□ -2.03
RPS6BP0CX38 snR45snR45 172 nt2.36□□□□□ -2.03
RPS6BP0CX38 MSH6YDR097C 3729 nt2.36□□□□□ -2.03
RPS6BP0CX38 UFD4YKL010C 4452 nt2.35□□□□□ -2.03
RPS6BP0CX38 UTP21YLR409C 2820 nt2.35□□□□□ -2.03
RPS6BP0CX38 STH1YIL126W 4080 nt2.34□□□□□ -2.03
RPS6BP0CX38 COA6YMR244C-A 315 nt2.34□□□□□ -2.03
RPS6BP0CX38 SIR4YDR227W 4077 nt2.33□□□□□ -2.04
RPS6BP0CX38 tM(CAU)Q2tM(CAU)Q2 78 nt2.33□□□□□ -2.04
RPS6BP0CX38 UTP22YGR090W 3714 nt2.33□□□□□ -2.04
RPS6BP0CX38 TOF1YNL273W 3717 nt2.33□□□□□ -2.04
RPS6BP0CX38 INO80YGL150C 4470 nt2.31□□□□□ -2.04
RPS6BP0CX38 snR81snR81 201 nt2.3□□□□□ -2.04
RPS6BP0CX38 MMS4YBR098W 2076 nt2.3□□□□□ -2.04
RPS6BP0CX38 RTP1YMR185W 2946 nt2.3□□□□□ -2.04
RPS6BP0CX38 TOR1YJR066W 7413 nt2.29□□□□□ -2.04
RPS6BP0CX38 HER1YOR227W 3741 nt2.29□□□□□ -2.04
RPS6BP0CX38 YML002WYML002W 2214 nt2.29□□□□□ -2.04
RPS6BP0CX38 SPP41YDR464W 4308 nt2.28□□□□□ -2.04
RPS6BP0CX38 BRE1YDL074C 2103 nt2.28□□□□□ -2.04
RPS6BP0CX38 EMC5YIL027C 426 nt2.28□□□□□ -2.04
RPS6BP0CX38 COG6YNL041C 2520 nt2.27□□□□□ -2.05
RPS6BP0CX38 MYO2YOR326W 4725 nt2.27□□□□□ -2.05
RPS6BP0CX38 YAL037C-AYAL037C-A 93 nt2.26□□□□□ -2.05
RPS6BP0CX38 GYP5YPL249C 2685 nt2.25□□□□□ -2.05
RPS6BP0CX38 RAD50YNL250W 3939 nt2.25□□□□□ -2.05
RPS6BP0CX38 BNI1YNL271C 5862 nt2.25□□□□□ -2.05
RPS6BP0CX38 YAR009CYAR009C 3591 nt2.24□□□□□ -2.05
RPS6BP0CX38 SEC31YDL195W 3822 nt2.24□□□□□ -2.05
RPS6BP0CX38 KAP120YPL125W 3099 nt2.23□□□□□ -2.05
RPS6BP0CX38 KOG1YHR186C 4674 nt2.23□□□□□ -2.05
RPS6BP0CX38 YLR041WYLR041W 321 nt2.23□□□□□ -2.05
RPS6BP0CX38 SEC16YPL085W 6588 nt2.23□□□□□ -2.05
RPS6BP0CX38 KIP1YBL063W 3336 nt2.23□□□□□ -2.05
RPS6BP0CX38 SMC1YFL008W 3678 nt2.22□□□□□ -2.05
RPS6BP0CX38 UBP2YOR124C 3819 nt2.22□□□□□ -2.05
RPS6BP0CX38 YLR232WYLR232W 348 nt2.21□□□□□ -2.06
RPS6BP0CX38 BIR1YJR089W 2865 nt2.21□□□□□ -2.06
RPS6BP0CX38 SEC21YNL287W 2808 nt2.21□□□□□ -2.06
RPS6BP0CX38 YCS4YLR272C 3531 nt2.2□□□□□ -2.06
RPS6BP0CX38 YDR210WYDR210W 228 nt2.2□□□□□ -2.06
RPS6BP0CX38 YHR180W-AYHR180W-A 183 nt2.2□□□□□ -2.06
RPS6BP0CX38 YJL127W-AYJL127W-A 117 nt2.2□□□□□ -2.06
RPS6BP0CX38 RPM2YML091C 3609 nt2.2□□□□□ -2.06
RPS6BP0CX38 HSL1YKL101W 4557 nt2.2□□□□□ -2.06
RPS6BP0CX38 snR62snR62 100 nt2.18□□□□□ -2.06
RPS6BP0CX38 YNL266WYNL266W 420 nt2.18□□□□□ -2.06
RPS6BP0CX38 YBR072C-AYBR072C-A 162 nt2.18□□□□□ -2.06
RPS6BP0CX38 FYV10YIL097W 1551 nt2.18□□□□□ -2.06
RPS6BP0CX38 MYO4YAL029C 4416 nt2.18□□□□□ -2.06
RPS6BP0CX38 RAD9YDR217C 3930 nt2.17□□□□□ -2.06
RPS6BP0CX38 YLR422WYLR422W 5799 nt2.17□□□□□ -2.06
RPS6BP0CX38 SLX4YLR135W 2247 nt2.17□□□□□ -2.06
RPS6BP0CX38 ROM2YLR371W 4071 nt2.17□□□□□ -2.06
RPS6BP0CX38 SEC1YDR164C 2175 nt2.16□□□□□ -2.06
RPS6BP0CX38 YGR146C-AYGR146C-A 162 nt2.16□□□□□ -2.06
RPS6BP0CX38 NOP9YJL010C 2001 nt2.15□□□□□ -2.06
RPS6BP0CX38 NUP157YER105C 4176 nt2.15□□□□□ -2.07
RPS6BP0CX38 TOR2YKL203C 7425 nt2.14□□□□□ -2.07
RPS6BP0CX38 NEO1YIL048W 3456 nt2.14□□□□□ -2.07
RPS6BP0CX38 ATG9YDL149W 2994 nt2.14□□□□□ -2.07
RPS6BP0CX38 RGA1YOR127W 3024 nt2.14□□□□□ -2.07
RPS6BP0CX38 KCS1YDR017C 3153 nt2.14□□□□□ -2.07
RPS6BP0CX38 UBR2YLR024C 5619 nt2.13□□□□□ -2.07
RPS6BP0CX38 SKI3YPR189W 4299 nt2.12□□□□□ -2.07
RPS6BP0CX38 snR14snR14 160 nt2.12□□□□□ -2.07
RPS6BP0CX38 snR190snR190 190 nt2.11□□□□□ -2.07
RPS6BP0CX38 YHR214C-BYHR214C-B 5382 nt2.11□□□□□ -2.07
RPS6BP0CX38 PDR8YLR266C 2106 nt2.11□□□□□ -2.07
RPS6BP0CX38 KAP122YGL016W 3246 nt2.09□□□□□ -2.07
RPS6BP0CX38 SMC4YLR086W 4257 nt2.09□□□□□ -2.07
RPS6BP0CX38 RPL26BYGR034W 384 nt2.09□□□□□ -2.07
Retrieved 100 of 7,029 protein–RNA pairs in 28.9 ms