Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
LINGO3P0C6S8 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LINGO3P0C6S8 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LINGO3P0C6S8 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LINGO3P0C6S8 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LINGO3P0C6S8 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LINGO3P0C6S8 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LINGO3P0C6S8 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
LINGO3P0C6S8 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LINGO3P0C6S8 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LINGO3P0C6S8 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
LINGO3P0C6S8 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LINGO3P0C6S8 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LINGO3P0C6S8 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LINGO3P0C6S8 AC079140.4-201ENST00000507448 529 ntBASIC19.29■□□□□ 0.68
LINGO3P0C6S8 AC087623.3-201ENST00000607047 1098 ntBASIC19.29■□□□□ 0.68
LINGO3P0C6S8 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.29■□□□□ 0.68
LINGO3P0C6S8 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LINGO3P0C6S8 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.29■□□□□ 0.68
LINGO3P0C6S8 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.29■□□□□ 0.68
LINGO3P0C6S8 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LINGO3P0C6S8 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.29■□□□□ 0.68
LINGO3P0C6S8 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.29■□□□□ 0.68
LINGO3P0C6S8 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LINGO3P0C6S8 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.29■□□□□ 0.68
LINGO3P0C6S8 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LINGO3P0C6S8 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LINGO3P0C6S8 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LINGO3P0C6S8 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LINGO3P0C6S8 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
LINGO3P0C6S8 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
LINGO3P0C6S8 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LINGO3P0C6S8 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.28■□□□□ 0.68
LINGO3P0C6S8 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LINGO3P0C6S8 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LINGO3P0C6S8 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
LINGO3P0C6S8 DUX4L2-201ENST00000561772 1275 ntBASIC19.28■□□□□ 0.68
LINGO3P0C6S8 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LINGO3P0C6S8 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.28■□□□□ 0.68
LINGO3P0C6S8 DUX4L6-201ENST00000626483 1275 ntBASIC19.28■□□□□ 0.68
LINGO3P0C6S8 DUX4L1-201ENST00000627662 1275 ntBASIC19.28■□□□□ 0.68
LINGO3P0C6S8 DUX4L8-201ENST00000629013 1275 ntBASIC19.28■□□□□ 0.68
LINGO3P0C6S8 DUX4L3-201ENST00000630187 1275 ntBASIC19.28■□□□□ 0.68
LINGO3P0C6S8 DUX4L7-201ENST00000630678 1275 ntBASIC19.28■□□□□ 0.68
LINGO3P0C6S8 DUX4L5-201ENST00000630834 1275 ntBASIC19.28■□□□□ 0.68
LINGO3P0C6S8 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.28■□□□□ 0.68
LINGO3P0C6S8 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LINGO3P0C6S8 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.28■□□□□ 0.68
LINGO3P0C6S8 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LINGO3P0C6S8 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LINGO3P0C6S8 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
LINGO3P0C6S8 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LINGO3P0C6S8 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LINGO3P0C6S8 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.28■□□□□ 0.68
LINGO3P0C6S8 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.28■□□□□ 0.68
LINGO3P0C6S8 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.28■□□□□ 0.68
LINGO3P0C6S8 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.28■□□□□ 0.68
LINGO3P0C6S8 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
LINGO3P0C6S8 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LINGO3P0C6S8 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
LINGO3P0C6S8 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.27■□□□□ 0.68
LINGO3P0C6S8 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LINGO3P0C6S8 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LINGO3P0C6S8 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LINGO3P0C6S8 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LINGO3P0C6S8 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.27■□□□□ 0.68
LINGO3P0C6S8 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.27■□□□□ 0.68
LINGO3P0C6S8 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.27■□□□□ 0.68
LINGO3P0C6S8 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
LINGO3P0C6S8 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LINGO3P0C6S8 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
LINGO3P0C6S8 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LINGO3P0C6S8 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
LINGO3P0C6S8 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
LINGO3P0C6S8 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.27■□□□□ 0.68
LINGO3P0C6S8 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LINGO3P0C6S8 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.27■□□□□ 0.68
LINGO3P0C6S8 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
LINGO3P0C6S8 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LINGO3P0C6S8 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LINGO3P0C6S8 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
LINGO3P0C6S8 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
LINGO3P0C6S8 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LINGO3P0C6S8 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.26■□□□□ 0.67
LINGO3P0C6S8 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LINGO3P0C6S8 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.26■□□□□ 0.67
LINGO3P0C6S8 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LINGO3P0C6S8 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
LINGO3P0C6S8 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
LINGO3P0C6S8 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LINGO3P0C6S8 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
LINGO3P0C6S8 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.26■□□□□ 0.67
LINGO3P0C6S8 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.26■□□□□ 0.67
LINGO3P0C6S8 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
LINGO3P0C6S8 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LINGO3P0C6S8 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LINGO3P0C6S8 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.26■□□□□ 0.67
LINGO3P0C6S8 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LINGO3P0C6S8 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LINGO3P0C6S8 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms