Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CTSBP07858 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.03■□□□□ 0.64
CTSBP07858 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.03■□□□□ 0.64
CTSBP07858 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CTSBP07858 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CTSBP07858 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.03■□□□□ 0.64
CTSBP07858 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CTSBP07858 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
CTSBP07858 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CTSBP07858 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.03■□□□□ 0.64
CTSBP07858 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.03■□□□□ 0.64
CTSBP07858 FAM197Y4-202ENST00000622692 608 ntBASIC19.03■□□□□ 0.64
CTSBP07858 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTSBP07858 AC020907.5-201ENST00000624372 1936 ntBASIC19.03■□□□□ 0.64
CTSBP07858 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CTSBP07858 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTSBP07858 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTSBP07858 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTSBP07858 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CTSBP07858 FEM1AP1-201ENST00000431297 1995 ntBASIC19.02■□□□□ 0.64
CTSBP07858 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
CTSBP07858 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
CTSBP07858 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CTSBP07858 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CTSBP07858 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CTSBP07858 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CTSBP07858 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CTSBP07858 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CTSBP07858 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CTSBP07858 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
CTSBP07858 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CTSBP07858 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CTSBP07858 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.02■□□□□ 0.64
CTSBP07858 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.02■□□□□ 0.64
CTSBP07858 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.02■□□□□ 0.64
CTSBP07858 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.02■□□□□ 0.64
CTSBP07858 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.02■□□□□ 0.64
CTSBP07858 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.02■□□□□ 0.64
CTSBP07858 AC124016.1-201ENST00000609552 612 ntBASIC19.02■□□□□ 0.64
CTSBP07858 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.02■□□□□ 0.64
CTSBP07858 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.02■□□□□ 0.64
CTSBP07858 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CTSBP07858 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
CTSBP07858 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.02■□□□□ 0.63
CTSBP07858 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CTSBP07858 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CTSBP07858 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
CTSBP07858 AL512408.1-201ENST00000569378 2000 ntBASIC19.01■□□□□ 0.63
CTSBP07858 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTSBP07858 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CTSBP07858 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.01■□□□□ 0.63
CTSBP07858 AP005212.1-201ENST00000581547 1997 ntBASIC19.01■□□□□ 0.63
CTSBP07858 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTSBP07858 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.01■□□□□ 0.63
CTSBP07858 KRASP1-201ENST00000407852 552 ntBASIC19.01■□□□□ 0.63
CTSBP07858 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.01■□□□□ 0.63
CTSBP07858 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.01■□□□□ 0.63
CTSBP07858 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.01■□□□□ 0.63
CTSBP07858 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.01■□□□□ 0.63
CTSBP07858 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.01■□□□□ 0.63
CTSBP07858 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.01■□□□□ 0.63
CTSBP07858 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CTSBP07858 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CTSBP07858 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.01■□□□□ 0.63
CTSBP07858 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.01■□□□□ 0.63
CTSBP07858 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTSBP07858 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CTSBP07858 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CTSBP07858 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CTSBP07858 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CTSBP07858 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CTSBP07858 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
CTSBP07858 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
CTSBP07858 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CTSBP07858 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
CTSBP07858 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19■□□□□ 0.63
CTSBP07858 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTSBP07858 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTSBP07858 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19■□□□□ 0.63
CTSBP07858 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CTSBP07858 HLA-G-202ENST00000376815 851 ntBASIC19■□□□□ 0.63
CTSBP07858 HLA-G-203ENST00000376818 1127 ntBASIC19■□□□□ 0.63
CTSBP07858 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTSBP07858 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19■□□□□ 0.63
CTSBP07858 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19■□□□□ 0.63
CTSBP07858 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19■□□□□ 0.63
CTSBP07858 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19■□□□□ 0.63
CTSBP07858 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19■□□□□ 0.63
CTSBP07858 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19■□□□□ 0.63
CTSBP07858 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19■□□□□ 0.63
CTSBP07858 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CTSBP07858 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19■□□□□ 0.63
CTSBP07858 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19■□□□□ 0.63
CTSBP07858 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CTSBP07858 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19■□□□□ 0.63
CTSBP07858 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTSBP07858 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CTSBP07858 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTSBP07858 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19■□□□□ 0.63
CTSBP07858 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms