Protein–RNA interactions for Protein: P04819

CDC9, DNA ligase 1, yeastyeast

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC9P04819 CLU1YMR012W 3834 nt1.7□□□□□ -2.14
CDC9P04819 MON2YNL297C 4911 nt1.69□□□□□ -2.14
CDC9P04819 SWI4YER111C 3282 nt1.68□□□□□ -2.14
CDC9P04819 YNL338WYNL338W 159 nt1.68□□□□□ -2.14
CDC9P04819 ROM2YLR371W 4071 nt1.68□□□□□ -2.14
CDC9P04819 FAB1YFR019W 6837 nt1.67□□□□□ -2.14
CDC9P04819 TTI1YKL033W 3117 nt1.67□□□□□ -2.14
CDC9P04819 RSM22YKL155C 1887 nt1.67□□□□□ -2.14
CDC9P04819 CDC25YLR310C 4770 nt1.67□□□□□ -2.14
CDC9P04819 POL5YEL055C 3069 nt1.67□□□□□ -2.14
CDC9P04819 PAA1YDR071C 576 nt1.67□□□□□ -2.14
CDC9P04819 YAL067W-AYAL067W-A 228 nt1.67□□□□□ -2.14
CDC9P04819 YMR272W-BYMR272W-B 108 nt1.67□□□□□ -2.14
CDC9P04819 YNL211CYNL211C 261 nt1.66□□□□□ -2.14
CDC9P04819 SET3YKR029C 2256 nt1.66□□□□□ -2.14
CDC9P04819 RTP1YMR185W 2946 nt1.66□□□□□ -2.14
CDC9P04819 COY1YKL179C 2040 nt1.66□□□□□ -2.14
CDC9P04819 STO1YMR125W 2586 nt1.65□□□□□ -2.14
CDC9P04819 COA6YMR244C-A 315 nt1.65□□□□□ -2.15
CDC9P04819 NUP145YGL092W 3954 nt1.65□□□□□ -2.15
CDC9P04819 RPS30BYOR182C 192 nt1.64□□□□□ -2.15
CDC9P04819 AZF1YOR113W 2745 nt1.64□□□□□ -2.15
CDC9P04819 EAF1YDR359C 2949 nt1.63□□□□□ -2.15
CDC9P04819 YOR381W-AYOR381W-A 168 nt1.63□□□□□ -2.15
CDC9P04819 YBR221W-AYBR221W-A 105 nt1.63□□□□□ -2.15
CDC9P04819 DNF3YMR162C 4971 nt1.63□□□□□ -2.15
CDC9P04819 BPH1YCR032W 6504 nt1.63□□□□□ -2.15
CDC9P04819 VPS15YBR097W 4365 nt1.62□□□□□ -2.15
CDC9P04819 EST2YLR318W 2655 nt1.62□□□□□ -2.15
CDC9P04819 COX12YLR038C 252 nt1.62□□□□□ -2.15
CDC9P04819 MDS3YGL197W 4464 nt1.62□□□□□ -2.15
CDC9P04819 APL3YBL037W 3078 nt1.61□□□□□ -2.15
CDC9P04819 WAR1YML076C 2835 nt1.61□□□□□ -2.15
CDC9P04819 YLR419WYLR419W 4308 nt1.61□□□□□ -2.15
CDC9P04819 SXM1YDR395W 2835 nt1.6□□□□□ -2.15
CDC9P04819 PMD1YER132C 5262 nt1.6□□□□□ -2.15
CDC9P04819 PMP1YCR024C-A 123 nt1.6□□□□□ -2.15
CDC9P04819 YKL100W-AYKL100W-A 90 nt1.6□□□□□ -2.15
CDC9P04819 YBR200W-AYBR200W-A 165 nt1.6□□□□□ -2.15
CDC9P04819 YIL134C-AYIL134C-A 204 nt1.59□□□□□ -2.15
CDC9P04819 MSN5YDR335W 3675 nt1.58□□□□□ -2.16
CDC9P04819 CMC4YMR194C-B 222 nt1.58□□□□□ -2.16
CDC9P04819 PEP1YBL017C 4740 nt1.57□□□□□ -2.16
CDC9P04819 YIL002W-AYIL002W-A 210 nt1.57□□□□□ -2.16
CDC9P04819 NOP9YJL010C 2001 nt1.57□□□□□ -2.16
CDC9P04819 SEC3YER008C 4011 nt1.56□□□□□ -2.16
CDC9P04819 YCR038W-AYCR038W-A 126 nt1.56□□□□□ -2.16
CDC9P04819 BRR2YER172C 6492 nt1.56□□□□□ -2.16
CDC9P04819 YGL123C-AYGL123C-A 231 nt1.55□□□□□ -2.16
CDC9P04819 NUP192YJL039C 5052 nt1.55□□□□□ -2.16
CDC9P04819 CFT1YDR301W 4074 nt1.55□□□□□ -2.16
CDC9P04819 YPL044CYPL044C 549 nt1.54□□□□□ -2.16
CDC9P04819 NUP188YML103C 4968 nt1.54□□□□□ -2.16
CDC9P04819 YLL020CYLL020C 306 nt1.53□□□□□ -2.16
CDC9P04819 HUG1YML058W-A 207 nt1.53□□□□□ -2.16
CDC9P04819 CHS1YNL192W 3396 nt1.52□□□□□ -2.17
CDC9P04819 RPL26BYGR034W 384 nt1.52□□□□□ -2.17
CDC9P04819 COX5BYIL111W 456 nt1.51□□□□□ -2.17
CDC9P04819 TRM732YMR259C 4263 nt1.51□□□□□ -2.17
CDC9P04819 NUP157YER105C 4176 nt1.49□□□□□ -2.17
CDC9P04819 YLR282CYLR282C 342 nt1.49□□□□□ -2.17
CDC9P04819 UTP8YGR128C 2142 nt1.49□□□□□ -2.17
CDC9P04819 PRP5YBR237W 2550 nt1.49□□□□□ -2.17
CDC9P04819 PRP42YDR235W 1635 nt1.48□□□□□ -2.17
CDC9P04819 SSK2YNR031C 4740 nt1.48□□□□□ -2.17
CDC9P04819 STF2YGR008C 255 nt1.48□□□□□ -2.17
CDC9P04819 YML002WYML002W 2214 nt1.47□□□□□ -2.17
CDC9P04819 YER053C-AYER053C-A 114 nt1.47□□□□□ -2.17
CDC9P04819 CDC31YOR257W 486 nt1.47□□□□□ -2.17
CDC9P04819 GEA2YEL022W 4380 nt1.46□□□□□ -2.18
CDC9P04819 YDL007C-AYDL007C-A 258 nt1.46□□□□□ -2.18
CDC9P04819 Q0092Q0092 141 nt1.45□□□□□ -2.18
CDC9P04819 YOR161W-AYOR161W-A 81 nt1.45□□□□□ -2.18
CDC9P04819 SPC110YDR356W 2835 nt1.45□□□□□ -2.18
CDC9P04819 BFR2YDR299W 1605 nt1.44□□□□□ -2.18
CDC9P04819 PIK1YNL267W 3201 nt1.44□□□□□ -2.18
CDC9P04819 STB6YKL072W 2301 nt1.44□□□□□ -2.18
CDC9P04819 SNU13YEL026W 381 nt1.43□□□□□ -2.18
CDC9P04819 snR190snR190 190 nt1.43□□□□□ -2.18
CDC9P04819 SEC21YNL287W 2808 nt1.43□□□□□ -2.18
CDC9P04819 YOR170WYOR170W 306 nt1.42□□□□□ -2.18
CDC9P04819 FIG2YCR089W 4830 nt1.42□□□□□ -2.18
CDC9P04819 IRA1YBR140C 9279 nt1.41□□□□□ -2.18
CDC9P04819 YHL015W-AYHL015W-A 84 nt1.41□□□□□ -2.18
CDC9P04819 MEC1YBR136W 7107 nt1.4□□□□□ -2.18
CDC9P04819 ATP8Q0080 147 nt1.39□□□□□ -2.19
CDC9P04819 YFR012W-AYFR012W-A 87 nt1.39□□□□□ -2.19
CDC9P04819 SEC8YPR055W 3198 nt1.39□□□□□ -2.19
CDC9P04819 KAP120YPL125W 3099 nt1.38□□□□□ -2.19
CDC9P04819 YOR102WYOR102W 351 nt1.38□□□□□ -2.19
CDC9P04819 CDC39YCR093W 6327 nt1.38□□□□□ -2.19
CDC9P04819 ASE1YOR058C 2658 nt1.37□□□□□ -2.19
CDC9P04819 YLR041WYLR041W 321 nt1.37□□□□□ -2.19
CDC9P04819 CCH1YGR217W 6120 nt1.37□□□□□ -2.19
CDC9P04819 YGL182CYGL182C 324 nt1.36□□□□□ -2.19
CDC9P04819 YGR130CYGR130C 2451 nt1.36□□□□□ -2.19
CDC9P04819 tQ(UUG)E2tQ(UUG)E2 72 nt1.36□□□□□ -2.19
CDC9P04819 FYV10YIL097W 1551 nt1.36□□□□□ -2.19
CDC9P04819 snR48snR48 113 nt1.35□□□□□ -2.19
CDC9P04819 YGR164WYGR164W 336 nt1.34□□□□□ -2.19
Retrieved 100 of 7,029 protein–RNA pairs in 11.6 ms