Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
OPN1SWP03999 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
OPN1SWP03999 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
OPN1SWP03999 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
OPN1SWP03999 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
OPN1SWP03999 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
OPN1SWP03999 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
OPN1SWP03999 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
OPN1SWP03999 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
OPN1SWP03999 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.68■□□□□ 0.58
OPN1SWP03999 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
OPN1SWP03999 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
OPN1SWP03999 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
OPN1SWP03999 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.68■□□□□ 0.58
OPN1SWP03999 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
OPN1SWP03999 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
OPN1SWP03999 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.68■□□□□ 0.58
OPN1SWP03999 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
OPN1SWP03999 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.68■□□□□ 0.58
OPN1SWP03999 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
OPN1SWP03999 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
OPN1SWP03999 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.68■□□□□ 0.58
OPN1SWP03999 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
OPN1SWP03999 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
OPN1SWP03999 AIRN-201ENST00000601203 4374 ntBASIC18.68■□□□□ 0.58
OPN1SWP03999 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
OPN1SWP03999 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
OPN1SWP03999 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
OPN1SWP03999 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
OPN1SWP03999 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.68■□□□□ 0.58
OPN1SWP03999 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
OPN1SWP03999 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.68■□□□□ 0.58
OPN1SWP03999 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.68■□□□□ 0.58
OPN1SWP03999 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
OPN1SWP03999 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
OPN1SWP03999 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
OPN1SWP03999 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
OPN1SWP03999 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
OPN1SWP03999 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
OPN1SWP03999 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
OPN1SWP03999 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.67■□□□□ 0.58
OPN1SWP03999 AC097381.1-201ENST00000429019 1296 ntBASIC18.67■□□□□ 0.58
OPN1SWP03999 AL356652.1-201ENST00000615962 565 ntBASIC18.67■□□□□ 0.58
OPN1SWP03999 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.67■□□□□ 0.58
OPN1SWP03999 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
OPN1SWP03999 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
OPN1SWP03999 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
OPN1SWP03999 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
OPN1SWP03999 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
OPN1SWP03999 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
OPN1SWP03999 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
OPN1SWP03999 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.67■□□□□ 0.58
OPN1SWP03999 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
OPN1SWP03999 TMEM179-206ENST00000616017 1645 ntBASIC18.67■□□□□ 0.58
OPN1SWP03999 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
OPN1SWP03999 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
OPN1SWP03999 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
OPN1SWP03999 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
OPN1SWP03999 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
OPN1SWP03999 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
OPN1SWP03999 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.66■□□□□ 0.58
OPN1SWP03999 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
OPN1SWP03999 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.66■□□□□ 0.58
OPN1SWP03999 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
OPN1SWP03999 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
OPN1SWP03999 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
OPN1SWP03999 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.66■□□□□ 0.58
OPN1SWP03999 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
OPN1SWP03999 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.66■□□□□ 0.58
OPN1SWP03999 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.66■□□□□ 0.58
OPN1SWP03999 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
OPN1SWP03999 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.66■□□□□ 0.58
OPN1SWP03999 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
OPN1SWP03999 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
OPN1SWP03999 AC087633.2-202ENST00000565166 1439 ntBASIC18.66■□□□□ 0.58
OPN1SWP03999 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.65■□□□□ 0.58
OPN1SWP03999 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
OPN1SWP03999 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.65■□□□□ 0.58
OPN1SWP03999 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
OPN1SWP03999 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.65■□□□□ 0.58
OPN1SWP03999 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
OPN1SWP03999 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
OPN1SWP03999 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
OPN1SWP03999 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
OPN1SWP03999 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
OPN1SWP03999 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
OPN1SWP03999 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
OPN1SWP03999 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
OPN1SWP03999 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.65■□□□□ 0.58
OPN1SWP03999 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
OPN1SWP03999 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.65■□□□□ 0.58
OPN1SWP03999 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
OPN1SWP03999 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.65■□□□□ 0.58
OPN1SWP03999 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.65■□□□□ 0.58
OPN1SWP03999 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.65■□□□□ 0.58
OPN1SWP03999 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.65■□□□□ 0.58
OPN1SWP03999 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.65■□□□□ 0.58
OPN1SWP03999 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
OPN1SWP03999 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.65■□□□□ 0.58
OPN1SWP03999 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms