Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.85■□□□□ 0.93
LMNAP02545 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
LMNAP02545 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
LMNAP02545 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.85■□□□□ 0.93
LMNAP02545 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.85■□□□□ 0.93
LMNAP02545 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.85■□□□□ 0.93
LMNAP02545 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.85■□□□□ 0.93
LMNAP02545 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.85■□□□□ 0.93
LMNAP02545 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LMNAP02545 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LMNAP02545 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
LMNAP02545 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LMNAP02545 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LMNAP02545 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.84■□□□□ 0.93
LMNAP02545 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LMNAP02545 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LMNAP02545 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.84■□□□□ 0.93
LMNAP02545 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.84■□□□□ 0.93
LMNAP02545 C2orf69P4-201ENST00000565394 541 ntBASIC20.84■□□□□ 0.93
LMNAP02545 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.84■□□□□ 0.93
LMNAP02545 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
LMNAP02545 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LMNAP02545 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.84■□□□□ 0.93
LMNAP02545 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
LMNAP02545 AP006587.3-201ENST00000525742 1516 ntBASIC20.83■□□□□ 0.93
LMNAP02545 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LMNAP02545 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LMNAP02545 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.83■□□□□ 0.93
LMNAP02545 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LMNAP02545 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.83■□□□□ 0.93
LMNAP02545 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
LMNAP02545 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LMNAP02545 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LMNAP02545 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC20.83■□□□□ 0.93
LMNAP02545 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LMNAP02545 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
LMNAP02545 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
LMNAP02545 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
LMNAP02545 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC20.83■□□□□ 0.93
LMNAP02545 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.83■□□□□ 0.93
LMNAP02545 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.83■□□□□ 0.93
LMNAP02545 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
LMNAP02545 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
LMNAP02545 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
LMNAP02545 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.83■□□□□ 0.92
LMNAP02545 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
LMNAP02545 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LMNAP02545 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LMNAP02545 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LMNAP02545 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
LMNAP02545 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
LMNAP02545 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.82■□□□□ 0.92
LMNAP02545 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LMNAP02545 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.82■□□□□ 0.92
LMNAP02545 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.82■□□□□ 0.92
LMNAP02545 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
LMNAP02545 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.82■□□□□ 0.92
LMNAP02545 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.82■□□□□ 0.92
LMNAP02545 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.82■□□□□ 0.92
LMNAP02545 AL355075.4-201ENST00000554988 638 ntBASIC20.82■□□□□ 0.92
LMNAP02545 FEM1AP1-201ENST00000431297 1995 ntBASIC20.82■□□□□ 0.92
LMNAP02545 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
LMNAP02545 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LMNAP02545 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LMNAP02545 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.81■□□□□ 0.92
LMNAP02545 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LMNAP02545 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.81■□□□□ 0.92
LMNAP02545 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LMNAP02545 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LMNAP02545 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LMNAP02545 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
LMNAP02545 OR7E47P-201ENST00000546390 1422 ntBASIC20.81■□□□□ 0.92
LMNAP02545 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
LMNAP02545 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
LMNAP02545 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LMNAP02545 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.81■□□□□ 0.92
LMNAP02545 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
LMNAP02545 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LMNAP02545 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LMNAP02545 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LMNAP02545 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.81■□□□□ 0.92
LMNAP02545 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
LMNAP02545 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.81■□□□□ 0.92
LMNAP02545 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LMNAP02545 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LMNAP02545 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
LMNAP02545 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LMNAP02545 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
LMNAP02545 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LMNAP02545 RNF146-204ENST00000476956 884 ntTSL 2 BASIC20.8■□□□□ 0.92
LMNAP02545 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.8■□□□□ 0.92
LMNAP02545 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
LMNAP02545 FAM21FP-204ENST00000608637 956 ntBASIC20.8■□□□□ 0.92
LMNAP02545 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
LMNAP02545 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LMNAP02545 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
LMNAP02545 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.8■□□□□ 0.92
LMNAP02545 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LMNAP02545 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LMNAP02545 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms