Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TOP3BO95985 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TOP3BO95985 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TOP3BO95985 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC20.49■□□□□ 0.87
TOP3BO95985 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.49■□□□□ 0.87
TOP3BO95985 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
TOP3BO95985 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.49■□□□□ 0.87
TOP3BO95985 LINC01023-201ENST00000606054 436 ntBASIC20.49■□□□□ 0.87
TOP3BO95985 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.49■□□□□ 0.87
TOP3BO95985 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.49■□□□□ 0.87
TOP3BO95985 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.49■□□□□ 0.87
TOP3BO95985 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TOP3BO95985 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.48■□□□□ 0.87
TOP3BO95985 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TOP3BO95985 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TOP3BO95985 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TOP3BO95985 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TOP3BO95985 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.48■□□□□ 0.87
TOP3BO95985 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TOP3BO95985 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
TOP3BO95985 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.48■□□□□ 0.87
TOP3BO95985 AC008403.3-201ENST00000598924 454 ntBASIC20.48■□□□□ 0.87
TOP3BO95985 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TOP3BO95985 AC011484.1-201ENST00000377652 1995 ntBASIC20.48■□□□□ 0.87
TOP3BO95985 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.48■□□□□ 0.87
TOP3BO95985 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.48■□□□□ 0.87
TOP3BO95985 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.48■□□□□ 0.87
TOP3BO95985 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
TOP3BO95985 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TOP3BO95985 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.48■□□□□ 0.87
TOP3BO95985 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.48■□□□□ 0.87
TOP3BO95985 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TOP3BO95985 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TOP3BO95985 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.47■□□□□ 0.87
TOP3BO95985 AC010980.2-201ENST00000587099 1412 ntBASIC20.47■□□□□ 0.87
TOP3BO95985 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
TOP3BO95985 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TOP3BO95985 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TOP3BO95985 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.47■□□□□ 0.87
TOP3BO95985 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.47■□□□□ 0.87
TOP3BO95985 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TOP3BO95985 RPPH1-201ENST00000516869 333 ntBASIC20.47■□□□□ 0.87
TOP3BO95985 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.47■□□□□ 0.87
TOP3BO95985 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.47■□□□□ 0.87
TOP3BO95985 AC053503.5-201ENST00000601508 636 ntBASIC20.47■□□□□ 0.87
TOP3BO95985 FAM197Y4-202ENST00000622692 608 ntBASIC20.47■□□□□ 0.87
TOP3BO95985 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
TOP3BO95985 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TOP3BO95985 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TOP3BO95985 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
TOP3BO95985 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TOP3BO95985 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TOP3BO95985 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
TOP3BO95985 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TOP3BO95985 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TOP3BO95985 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.46■□□□□ 0.87
TOP3BO95985 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TOP3BO95985 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TOP3BO95985 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
TOP3BO95985 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TOP3BO95985 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
TOP3BO95985 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TOP3BO95985 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
TOP3BO95985 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TOP3BO95985 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TOP3BO95985 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
TOP3BO95985 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TOP3BO95985 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.46■□□□□ 0.87
TOP3BO95985 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TOP3BO95985 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.46■□□□□ 0.87
TOP3BO95985 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.46■□□□□ 0.87
TOP3BO95985 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.46■□□□□ 0.87
TOP3BO95985 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC20.46■□□□□ 0.87
TOP3BO95985 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
TOP3BO95985 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.46■□□□□ 0.87
TOP3BO95985 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.46■□□□□ 0.87
TOP3BO95985 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TOP3BO95985 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
TOP3BO95985 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.46■□□□□ 0.87
TOP3BO95985 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.45■□□□□ 0.87
TOP3BO95985 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TOP3BO95985 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TOP3BO95985 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TOP3BO95985 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TOP3BO95985 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TOP3BO95985 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TOP3BO95985 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.45■□□□□ 0.86
TOP3BO95985 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
TOP3BO95985 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.45■□□□□ 0.86
TOP3BO95985 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
TOP3BO95985 C1QBPP2-201ENST00000528754 825 ntBASIC20.45■□□□□ 0.86
TOP3BO95985 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.45■□□□□ 0.86
TOP3BO95985 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.45■□□□□ 0.86
TOP3BO95985 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.45■□□□□ 0.86
TOP3BO95985 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TOP3BO95985 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
TOP3BO95985 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
TOP3BO95985 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TOP3BO95985 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.45■□□□□ 0.86
TOP3BO95985 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms