Protein–RNA interactions for Protein: O95407

TNFRSF6B, Tumor necrosis factor receptor superfamily member 6B, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF6BO95407 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TNFRSF6BO95407 PTGES2-AS1-201ENST00000443493 2100 ntBASIC14.53□□□□□ -0.08
TNFRSF6BO95407 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TNFRSF6BO95407 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
TNFRSF6BO95407 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TNFRSF6BO95407 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TNFRSF6BO95407 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TNFRSF6BO95407 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TNFRSF6BO95407 AC005224.4-201ENST00000583262 1652 ntBASIC14.52□□□□□ -0.08
TNFRSF6BO95407 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
TNFRSF6BO95407 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TNFRSF6BO95407 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
TNFRSF6BO95407 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TNFRSF6BO95407 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TNFRSF6BO95407 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC14.52□□□□□ -0.08
TNFRSF6BO95407 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC14.52□□□□□ -0.08
TNFRSF6BO95407 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
TNFRSF6BO95407 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC14.52□□□□□ -0.08
TNFRSF6BO95407 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TNFRSF6BO95407 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
TNFRSF6BO95407 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
TNFRSF6BO95407 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TNFRSF6BO95407 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC14.52□□□□□ -0.09
TNFRSF6BO95407 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC14.52□□□□□ -0.09
TNFRSF6BO95407 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
TNFRSF6BO95407 DUX4L19-201ENST00000557448 1267 ntBASIC14.52□□□□□ -0.09
TNFRSF6BO95407 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC14.52□□□□□ -0.09
TNFRSF6BO95407 AC011298.3-201ENST00000615796 283 ntBASIC14.52□□□□□ -0.09
TNFRSF6BO95407 RASSF1-AS1-201ENST00000629828 790 ntBASIC14.52□□□□□ -0.09
TNFRSF6BO95407 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC14.52□□□□□ -0.09
TNFRSF6BO95407 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC14.52□□□□□ -0.09
TNFRSF6BO95407 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
TNFRSF6BO95407 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC14.52□□□□□ -0.09
TNFRSF6BO95407 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC14.52□□□□□ -0.09
TNFRSF6BO95407 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
TNFRSF6BO95407 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TNFRSF6BO95407 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TNFRSF6BO95407 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TNFRSF6BO95407 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TNFRSF6BO95407 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
TNFRSF6BO95407 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
TNFRSF6BO95407 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TNFRSF6BO95407 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC14.51□□□□□ -0.09
TNFRSF6BO95407 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TNFRSF6BO95407 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC14.51□□□□□ -0.09
TNFRSF6BO95407 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC14.51□□□□□ -0.09
TNFRSF6BO95407 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TNFRSF6BO95407 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC14.51□□□□□ -0.09
TNFRSF6BO95407 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC14.51□□□□□ -0.09
TNFRSF6BO95407 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC14.51□□□□□ -0.09
TNFRSF6BO95407 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TNFRSF6BO95407 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC14.51□□□□□ -0.09
TNFRSF6BO95407 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TNFRSF6BO95407 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TNFRSF6BO95407 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC14.51□□□□□ -0.09
TNFRSF6BO95407 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TNFRSF6BO95407 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TNFRSF6BO95407 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC14.51□□□□□ -0.09
TNFRSF6BO95407 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
TNFRSF6BO95407 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TNFRSF6BO95407 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TNFRSF6BO95407 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC14.51□□□□□ -0.09
TNFRSF6BO95407 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TNFRSF6BO95407 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC14.5□□□□□ -0.09
TNFRSF6BO95407 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TNFRSF6BO95407 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
TNFRSF6BO95407 PWWP2AP1-201ENST00000429776 2273 ntBASIC14.5□□□□□ -0.09
TNFRSF6BO95407 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
TNFRSF6BO95407 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TNFRSF6BO95407 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TNFRSF6BO95407 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TNFRSF6BO95407 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
TNFRSF6BO95407 DPP3P2-201ENST00000416030 1696 ntBASIC14.5□□□□□ -0.09
TNFRSF6BO95407 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TNFRSF6BO95407 SNX3-202ENST00000349379 890 ntTSL 2 BASIC14.5□□□□□ -0.09
TNFRSF6BO95407 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TNFRSF6BO95407 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC14.5□□□□□ -0.09
TNFRSF6BO95407 MIR3621-201ENST00000580529 85 ntBASIC14.5□□□□□ -0.09
TNFRSF6BO95407 AC053503.5-201ENST00000601508 636 ntBASIC14.5□□□□□ -0.09
TNFRSF6BO95407 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC14.5□□□□□ -0.09
TNFRSF6BO95407 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC14.5□□□□□ -0.09
TNFRSF6BO95407 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC14.5□□□□□ -0.09
TNFRSF6BO95407 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
TNFRSF6BO95407 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TNFRSF6BO95407 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TNFRSF6BO95407 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TNFRSF6BO95407 BX119927.1-201ENST00000636596 1552 ntBASIC14.5□□□□□ -0.09
TNFRSF6BO95407 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
TNFRSF6BO95407 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TNFRSF6BO95407 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC14.5□□□□□ -0.09
TNFRSF6BO95407 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TNFRSF6BO95407 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TNFRSF6BO95407 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TNFRSF6BO95407 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC14.5□□□□□ -0.09
TNFRSF6BO95407 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
TNFRSF6BO95407 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TNFRSF6BO95407 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TNFRSF6BO95407 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TNFRSF6BO95407 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC14.49□□□□□ -0.09
TNFRSF6BO95407 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms