Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CSPG5O95196 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC21.54■■□□□ 1.04
CSPG5O95196 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC21.54■■□□□ 1.04
CSPG5O95196 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.54■■□□□ 1.04
CSPG5O95196 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CSPG5O95196 AL024507.2-201ENST00000606070 2574 ntBASIC21.54■■□□□ 1.04
CSPG5O95196 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.54■■□□□ 1.04
CSPG5O95196 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.54■■□□□ 1.04
CSPG5O95196 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CSPG5O95196 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CSPG5O95196 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
CSPG5O95196 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CSPG5O95196 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CSPG5O95196 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CSPG5O95196 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CSPG5O95196 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CSPG5O95196 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CSPG5O95196 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CSPG5O95196 MIR1238-201ENST00000408483 83 ntBASIC21.53■■□□□ 1.04
CSPG5O95196 AL390955.1-201ENST00000428694 934 ntBASIC21.53■■□□□ 1.04
CSPG5O95196 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC21.53■■□□□ 1.04
CSPG5O95196 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CSPG5O95196 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC21.53■■□□□ 1.04
CSPG5O95196 PNN-205ENST00000556530 601 ntTSL 2 BASIC21.53■■□□□ 1.04
CSPG5O95196 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CSPG5O95196 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC21.53■■□□□ 1.04
CSPG5O95196 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CSPG5O95196 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CSPG5O95196 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CSPG5O95196 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.52■■□□□ 1.04
CSPG5O95196 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
CSPG5O95196 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CSPG5O95196 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CSPG5O95196 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CSPG5O95196 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CSPG5O95196 AC005521.1-201ENST00000393351 872 ntBASIC21.52■■□□□ 1.04
CSPG5O95196 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CSPG5O95196 F2R-202ENST00000505600 442 ntTSL 2 BASIC21.52■■□□□ 1.04
CSPG5O95196 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC21.52■■□□□ 1.04
CSPG5O95196 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
CSPG5O95196 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.52■■□□□ 1.04
CSPG5O95196 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
CSPG5O95196 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
CSPG5O95196 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
CSPG5O95196 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.51■■□□□ 1.03
CSPG5O95196 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
CSPG5O95196 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CSPG5O95196 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CSPG5O95196 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.51■■□□□ 1.03
CSPG5O95196 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
CSPG5O95196 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CSPG5O95196 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC21.51■■□□□ 1.03
CSPG5O95196 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
CSPG5O95196 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.51■■□□□ 1.03
CSPG5O95196 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC21.51■■□□□ 1.03
CSPG5O95196 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
CSPG5O95196 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC21.51■■□□□ 1.03
CSPG5O95196 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
CSPG5O95196 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CSPG5O95196 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
CSPG5O95196 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CSPG5O95196 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CSPG5O95196 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CSPG5O95196 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.5■■□□□ 1.03
CSPG5O95196 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
CSPG5O95196 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CSPG5O95196 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CSPG5O95196 RBM17P1-201ENST00000453646 1190 ntBASIC21.5■■□□□ 1.03
CSPG5O95196 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC21.5■■□□□ 1.03
CSPG5O95196 FDX2-207ENST00000494368 584 ntTSL 4 BASIC21.5■■□□□ 1.03
CSPG5O95196 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CSPG5O95196 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CSPG5O95196 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC21.5■■□□□ 1.03
CSPG5O95196 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC21.5■■□□□ 1.03
CSPG5O95196 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CSPG5O95196 AC005363.2-201ENST00000618631 242 ntBASIC21.5■■□□□ 1.03
CSPG5O95196 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC21.5■■□□□ 1.03
CSPG5O95196 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CSPG5O95196 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
CSPG5O95196 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CSPG5O95196 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.5■■□□□ 1.03
CSPG5O95196 AC079598.2-202ENST00000546624 1451 ntBASIC21.5■■□□□ 1.03
CSPG5O95196 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.5■■□□□ 1.03
CSPG5O95196 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CSPG5O95196 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.49■■□□□ 1.03
CSPG5O95196 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CSPG5O95196 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CSPG5O95196 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CSPG5O95196 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC21.49■■□□□ 1.03
CSPG5O95196 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.49■■□□□ 1.03
CSPG5O95196 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC21.49■■□□□ 1.03
CSPG5O95196 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC21.49■■□□□ 1.03
CSPG5O95196 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC21.49■■□□□ 1.03
CSPG5O95196 KRT16P5-201ENST00000455284 522 ntBASIC21.49■■□□□ 1.03
CSPG5O95196 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC21.49■■□□□ 1.03
CSPG5O95196 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CSPG5O95196 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
CSPG5O95196 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CSPG5O95196 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CSPG5O95196 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms