Protein–RNA interactions for Protein: O75909

CCNK, Cyclin-K, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNKO75909 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.36■□□□□ 0.37
CCNKO75909 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCNKO75909 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC17.36■□□□□ 0.37
CCNKO75909 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CCNKO75909 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCNKO75909 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.36■□□□□ 0.37
CCNKO75909 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.36■□□□□ 0.37
CCNKO75909 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.36■□□□□ 0.37
CCNKO75909 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCNKO75909 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC17.36■□□□□ 0.37
CCNKO75909 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC17.36■□□□□ 0.37
CCNKO75909 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC17.36■□□□□ 0.37
CCNKO75909 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CCNKO75909 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCNKO75909 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.36■□□□□ 0.37
CCNKO75909 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCNKO75909 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCNKO75909 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCNKO75909 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
CCNKO75909 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCNKO75909 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCNKO75909 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
CCNKO75909 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCNKO75909 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCNKO75909 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.36■□□□□ 0.37
CCNKO75909 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCNKO75909 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCNKO75909 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
CCNKO75909 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCNKO75909 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCNKO75909 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.35■□□□□ 0.37
CCNKO75909 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCNKO75909 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCNKO75909 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC17.35■□□□□ 0.37
CCNKO75909 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC17.35■□□□□ 0.37
CCNKO75909 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC17.35■□□□□ 0.37
CCNKO75909 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC17.35■□□□□ 0.37
CCNKO75909 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC17.35■□□□□ 0.37
CCNKO75909 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCNKO75909 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCNKO75909 EI24-211ENST00000534546 1544 ntTSL 2 BASIC17.35■□□□□ 0.37
CCNKO75909 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCNKO75909 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC17.35■□□□□ 0.37
CCNKO75909 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCNKO75909 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CCNKO75909 NOC2LP2-201ENST00000407594 1944 ntBASIC17.35■□□□□ 0.37
CCNKO75909 LINC01465-201ENST00000408887 1940 ntBASIC17.35■□□□□ 0.37
CCNKO75909 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.35■□□□□ 0.37
CCNKO75909 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.35■□□□□ 0.37
CCNKO75909 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCNKO75909 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCNKO75909 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCNKO75909 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CCNKO75909 HTR7P1-202ENST00000624664 4411 ntBASIC17.34■□□□□ 0.37
CCNKO75909 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
CCNKO75909 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCNKO75909 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCNKO75909 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCNKO75909 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCNKO75909 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCNKO75909 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCNKO75909 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCNKO75909 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCNKO75909 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CCNKO75909 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CCNKO75909 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CCNKO75909 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CCNKO75909 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CCNKO75909 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.34■□□□□ 0.37
CCNKO75909 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCNKO75909 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCNKO75909 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCNKO75909 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.33■□□□□ 0.37
CCNKO75909 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.33■□□□□ 0.37
CCNKO75909 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC17.33■□□□□ 0.37
CCNKO75909 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
CCNKO75909 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
CCNKO75909 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCNKO75909 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC17.33■□□□□ 0.36
CCNKO75909 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC17.33■□□□□ 0.36
CCNKO75909 AC010980.1-201ENST00000587192 1142 ntBASIC17.33■□□□□ 0.36
CCNKO75909 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC17.33■□□□□ 0.36
CCNKO75909 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC17.33■□□□□ 0.36
CCNKO75909 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCNKO75909 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCNKO75909 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.33■□□□□ 0.36
CCNKO75909 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CCNKO75909 AC099398.1-201ENST00000567919 2776 ntBASIC17.33■□□□□ 0.36
CCNKO75909 AC003102.1-202ENST00000563394 1796 ntBASIC17.33■□□□□ 0.36
CCNKO75909 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
CCNKO75909 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCNKO75909 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
CCNKO75909 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CCNKO75909 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CCNKO75909 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCNKO75909 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC17.32■□□□□ 0.36
CCNKO75909 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCNKO75909 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC17.32■□□□□ 0.36
CCNKO75909 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.32■□□□□ 0.36
CCNKO75909 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms