Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
USH2AO75445 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
USH2AO75445 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC9.01□□□□□ -0.97
USH2AO75445 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC9.01□□□□□ -0.97
USH2AO75445 PRSS44-201ENST00000515154 1146 ntBASIC9.01□□□□□ -0.97
USH2AO75445 AP002469.2-201ENST00000531724 424 ntBASIC9.01□□□□□ -0.97
USH2AO75445 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC9.01□□□□□ -0.97
USH2AO75445 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC9.01□□□□□ -0.97
USH2AO75445 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC9.01□□□□□ -0.97
USH2AO75445 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
USH2AO75445 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC9.01□□□□□ -0.97
USH2AO75445 SPDYE13P-201ENST00000445314 798 ntBASIC9.01□□□□□ -0.97
USH2AO75445 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC9.01□□□□□ -0.97
USH2AO75445 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC9.01□□□□□ -0.97
USH2AO75445 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC9.01□□□□□ -0.97
USH2AO75445 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
USH2AO75445 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
USH2AO75445 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
USH2AO75445 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
USH2AO75445 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
USH2AO75445 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC9.01□□□□□ -0.97
USH2AO75445 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC9.01□□□□□ -0.97
USH2AO75445 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC9.01□□□□□ -0.97
USH2AO75445 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC9.01□□□□□ -0.97
USH2AO75445 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC9.01□□□□□ -0.97
USH2AO75445 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
USH2AO75445 SPDYE15P-201ENST00000424157 909 ntBASIC9.01□□□□□ -0.97
USH2AO75445 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC9.01□□□□□ -0.97
USH2AO75445 CNP-204ENST00000472031 1019 ntTSL 2 BASIC9.01□□□□□ -0.97
USH2AO75445 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC9.01□□□□□ -0.97
USH2AO75445 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC9.01□□□□□ -0.97
USH2AO75445 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC9.01□□□□□ -0.97
USH2AO75445 AC111152.3-201ENST00000569699 673 ntBASIC9.01□□□□□ -0.97
USH2AO75445 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC9.01□□□□□ -0.97
USH2AO75445 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC9.01□□□□□ -0.97
USH2AO75445 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC9□□□□□ -0.97
USH2AO75445 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC9□□□□□ -0.97
USH2AO75445 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC9□□□□□ -0.97
USH2AO75445 ETFA-216ENST00000560726 942 ntTSL 3 BASIC9□□□□□ -0.97
USH2AO75445 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
USH2AO75445 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC9□□□□□ -0.97
USH2AO75445 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
USH2AO75445 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
USH2AO75445 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
USH2AO75445 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC9□□□□□ -0.97
USH2AO75445 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC9□□□□□ -0.97
USH2AO75445 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC9□□□□□ -0.97
USH2AO75445 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC9□□□□□ -0.97
USH2AO75445 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC9□□□□□ -0.97
USH2AO75445 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC9□□□□□ -0.97
USH2AO75445 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC9□□□□□ -0.97
USH2AO75445 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
USH2AO75445 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC9□□□□□ -0.97
USH2AO75445 AL160237.2-201ENST00000556165 472 ntBASIC9□□□□□ -0.97
USH2AO75445 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC9□□□□□ -0.97
USH2AO75445 AC069148.1-201ENST00000608741 768 ntBASIC9□□□□□ -0.97
USH2AO75445 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
USH2AO75445 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC9□□□□□ -0.97
USH2AO75445 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
USH2AO75445 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC9□□□□□ -0.97
USH2AO75445 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC9□□□□□ -0.97
USH2AO75445 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
USH2AO75445 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
USH2AO75445 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
USH2AO75445 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
USH2AO75445 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC9□□□□□ -0.97
USH2AO75445 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC9□□□□□ -0.97
USH2AO75445 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
USH2AO75445 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
USH2AO75445 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC8.99□□□□□ -0.97
USH2AO75445 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
USH2AO75445 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
USH2AO75445 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
USH2AO75445 AP002383.4-201ENST00000442518 975 ntBASIC8.99□□□□□ -0.97
USH2AO75445 SNX5-210ENST00000481323 562 ntTSL 3 BASIC8.99□□□□□ -0.97
USH2AO75445 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
USH2AO75445 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC8.99□□□□□ -0.97
USH2AO75445 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
USH2AO75445 AC007663.1-201ENST00000438948 1240 ntBASIC8.99□□□□□ -0.97
USH2AO75445 FAAHP1-202ENST00000446499 1238 ntBASIC8.99□□□□□ -0.97
USH2AO75445 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
USH2AO75445 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
USH2AO75445 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC8.99□□□□□ -0.97
USH2AO75445 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
USH2AO75445 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
USH2AO75445 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
USH2AO75445 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
USH2AO75445 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC8.99□□□□□ -0.97
USH2AO75445 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC8.99□□□□□ -0.97
USH2AO75445 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
USH2AO75445 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
USH2AO75445 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
USH2AO75445 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC8.99□□□□□ -0.97
USH2AO75445 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
USH2AO75445 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
USH2AO75445 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
USH2AO75445 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
USH2AO75445 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
USH2AO75445 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
USH2AO75445 PPIH-202ENST00000372549 327 ntTSL 3 BASIC8.98□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms