Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDH16O75309 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.22■□□□□ 0.83
CDH16O75309 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDH16O75309 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.22■□□□□ 0.83
CDH16O75309 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.22■□□□□ 0.83
CDH16O75309 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDH16O75309 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDH16O75309 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDH16O75309 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDH16O75309 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDH16O75309 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDH16O75309 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDH16O75309 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.21■□□□□ 0.83
CDH16O75309 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDH16O75309 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.21■□□□□ 0.83
CDH16O75309 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.21■□□□□ 0.83
CDH16O75309 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDH16O75309 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDH16O75309 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDH16O75309 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDH16O75309 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CDH16O75309 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.21■□□□□ 0.83
CDH16O75309 AC007322.3-201ENST00000426526 701 ntBASIC20.21■□□□□ 0.83
CDH16O75309 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.21■□□□□ 0.83
CDH16O75309 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDH16O75309 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.21■□□□□ 0.83
CDH16O75309 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.21■□□□□ 0.83
CDH16O75309 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
CDH16O75309 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CDH16O75309 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.21■□□□□ 0.83
CDH16O75309 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CDH16O75309 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.2■□□□□ 0.82
CDH16O75309 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.2■□□□□ 0.82
CDH16O75309 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDH16O75309 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDH16O75309 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.2■□□□□ 0.82
CDH16O75309 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
CDH16O75309 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.2■□□□□ 0.82
CDH16O75309 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CDH16O75309 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.2■□□□□ 0.82
CDH16O75309 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.2■□□□□ 0.82
CDH16O75309 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDH16O75309 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDH16O75309 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDH16O75309 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
CDH16O75309 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDH16O75309 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDH16O75309 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDH16O75309 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.2■□□□□ 0.82
CDH16O75309 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.2■□□□□ 0.82
CDH16O75309 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.2■□□□□ 0.82
CDH16O75309 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDH16O75309 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDH16O75309 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.19■□□□□ 0.82
CDH16O75309 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.19■□□□□ 0.82
CDH16O75309 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDH16O75309 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDH16O75309 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDH16O75309 AC091799.1-201ENST00000422823 811 ntBASIC20.19■□□□□ 0.82
CDH16O75309 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.19■□□□□ 0.82
CDH16O75309 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.19■□□□□ 0.82
CDH16O75309 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDH16O75309 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDH16O75309 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDH16O75309 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDH16O75309 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDH16O75309 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDH16O75309 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDH16O75309 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDH16O75309 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.19■□□□□ 0.82
CDH16O75309 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDH16O75309 AC093503.3-201ENST00000624917 2352 ntBASIC20.19■□□□□ 0.82
CDH16O75309 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.18■□□□□ 0.82
CDH16O75309 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
CDH16O75309 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.18■□□□□ 0.82
CDH16O75309 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDH16O75309 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDH16O75309 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CDH16O75309 SLC7A5P2-201ENST00000553010 536 ntBASIC20.18■□□□□ 0.82
CDH16O75309 DUX4L2-201ENST00000561772 1275 ntBASIC20.18■□□□□ 0.82
CDH16O75309 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.18■□□□□ 0.82
CDH16O75309 DUX4L6-201ENST00000626483 1275 ntBASIC20.18■□□□□ 0.82
CDH16O75309 DUX4L1-201ENST00000627662 1275 ntBASIC20.18■□□□□ 0.82
CDH16O75309 DUX4L8-201ENST00000629013 1275 ntBASIC20.18■□□□□ 0.82
CDH16O75309 DUX4L3-201ENST00000630187 1275 ntBASIC20.18■□□□□ 0.82
CDH16O75309 DUX4L7-201ENST00000630678 1275 ntBASIC20.18■□□□□ 0.82
CDH16O75309 DUX4L5-201ENST00000630834 1275 ntBASIC20.18■□□□□ 0.82
CDH16O75309 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDH16O75309 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDH16O75309 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDH16O75309 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CDH16O75309 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
CDH16O75309 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.18■□□□□ 0.82
CDH16O75309 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CDH16O75309 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.18■□□□□ 0.82
CDH16O75309 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDH16O75309 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CDH16O75309 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDH16O75309 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
CDH16O75309 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms