Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 MFSD11-216ENST00000590393 1141 ntBASIC18.99■□□□□ 0.63
SCN2BO60939 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.99■□□□□ 0.63
SCN2BO60939 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SCN2BO60939 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.99■□□□□ 0.63
SCN2BO60939 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
SCN2BO60939 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
SCN2BO60939 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.99■□□□□ 0.63
SCN2BO60939 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SCN2BO60939 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.99■□□□□ 0.63
SCN2BO60939 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SCN2BO60939 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SCN2BO60939 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SCN2BO60939 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
SCN2BO60939 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.98■□□□□ 0.63
SCN2BO60939 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
SCN2BO60939 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SCN2BO60939 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SCN2BO60939 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
SCN2BO60939 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.98■□□□□ 0.63
SCN2BO60939 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.98■□□□□ 0.63
SCN2BO60939 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.98■□□□□ 0.63
SCN2BO60939 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SCN2BO60939 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.98■□□□□ 0.63
SCN2BO60939 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.98■□□□□ 0.63
SCN2BO60939 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.98■□□□□ 0.63
SCN2BO60939 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.98■□□□□ 0.63
SCN2BO60939 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SCN2BO60939 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SCN2BO60939 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SCN2BO60939 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SCN2BO60939 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SCN2BO60939 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SCN2BO60939 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SCN2BO60939 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SCN2BO60939 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SCN2BO60939 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.97■□□□□ 0.63
SCN2BO60939 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SCN2BO60939 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SCN2BO60939 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SCN2BO60939 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SCN2BO60939 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SCN2BO60939 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.97■□□□□ 0.63
SCN2BO60939 KRT18P5-201ENST00000436075 1291 ntBASIC18.97■□□□□ 0.63
SCN2BO60939 CNN2P6-201ENST00000439038 900 ntBASIC18.97■□□□□ 0.63
SCN2BO60939 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.97■□□□□ 0.63
SCN2BO60939 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.97■□□□□ 0.63
SCN2BO60939 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.97■□□□□ 0.63
SCN2BO60939 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SCN2BO60939 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SCN2BO60939 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
SCN2BO60939 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SCN2BO60939 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.97■□□□□ 0.63
SCN2BO60939 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.97■□□□□ 0.63
SCN2BO60939 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SCN2BO60939 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
SCN2BO60939 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SCN2BO60939 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.96■□□□□ 0.63
SCN2BO60939 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SCN2BO60939 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SCN2BO60939 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.96■□□□□ 0.63
SCN2BO60939 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
SCN2BO60939 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SCN2BO60939 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
SCN2BO60939 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SCN2BO60939 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SCN2BO60939 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.96■□□□□ 0.63
SCN2BO60939 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.96■□□□□ 0.63
SCN2BO60939 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.96■□□□□ 0.63
SCN2BO60939 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.96■□□□□ 0.63
SCN2BO60939 DUX4L16-201ENST00000555130 1264 ntBASIC18.96■□□□□ 0.63
SCN2BO60939 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.96■□□□□ 0.63
SCN2BO60939 AC100791.3-201ENST00000617619 330 ntBASIC18.96■□□□□ 0.63
SCN2BO60939 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.96■□□□□ 0.63
SCN2BO60939 AC116562.4-201ENST00000641316 2276 ntBASIC18.96■□□□□ 0.63
SCN2BO60939 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
SCN2BO60939 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.96■□□□□ 0.63
SCN2BO60939 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
SCN2BO60939 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.96■□□□□ 0.63
SCN2BO60939 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SCN2BO60939 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SCN2BO60939 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.95■□□□□ 0.62
SCN2BO60939 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.95■□□□□ 0.62
SCN2BO60939 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SCN2BO60939 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SCN2BO60939 AC068338.2-201ENST00000563278 1430 ntBASIC18.95■□□□□ 0.62
SCN2BO60939 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.95■□□□□ 0.62
SCN2BO60939 RARRES2P4-201ENST00000514074 484 ntBASIC18.95■□□□□ 0.62
SCN2BO60939 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.95■□□□□ 0.62
SCN2BO60939 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SCN2BO60939 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SCN2BO60939 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SCN2BO60939 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
SCN2BO60939 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.95■□□□□ 0.62
SCN2BO60939 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.95■□□□□ 0.62
SCN2BO60939 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
SCN2BO60939 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.94■□□□□ 0.62
SCN2BO60939 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SCN2BO60939 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SCN2BO60939 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SCN2BO60939 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms