Protein–RNA interactions for Protein: O43405

COCH, Cochlin, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COCHO43405 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.77■□□□□ 0.92
COCHO43405 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
COCHO43405 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.77■□□□□ 0.92
COCHO43405 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
COCHO43405 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.77■□□□□ 0.92
COCHO43405 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.77■□□□□ 0.92
COCHO43405 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
COCHO43405 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
COCHO43405 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.77■□□□□ 0.91
COCHO43405 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.76■□□□□ 0.91
COCHO43405 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
COCHO43405 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
COCHO43405 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.76■□□□□ 0.91
COCHO43405 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
COCHO43405 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
COCHO43405 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
COCHO43405 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.76■□□□□ 0.91
COCHO43405 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
COCHO43405 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.76■□□□□ 0.91
COCHO43405 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
COCHO43405 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.76■□□□□ 0.91
COCHO43405 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
COCHO43405 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
COCHO43405 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
COCHO43405 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.76■□□□□ 0.91
COCHO43405 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.75■□□□□ 0.91
COCHO43405 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
COCHO43405 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
COCHO43405 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COCHO43405 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
COCHO43405 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.75■□□□□ 0.91
COCHO43405 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
COCHO43405 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.75■□□□□ 0.91
COCHO43405 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.75■□□□□ 0.91
COCHO43405 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.75■□□□□ 0.91
COCHO43405 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COCHO43405 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
COCHO43405 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.75■□□□□ 0.91
COCHO43405 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
COCHO43405 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COCHO43405 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.75■□□□□ 0.91
COCHO43405 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.74■□□□□ 0.91
COCHO43405 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
COCHO43405 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
COCHO43405 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COCHO43405 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.74■□□□□ 0.91
COCHO43405 RPS2P55-201ENST00000397318 883 ntBASIC20.74■□□□□ 0.91
COCHO43405 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.74■□□□□ 0.91
COCHO43405 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
COCHO43405 AC107956.1-201ENST00000494359 873 ntBASIC20.74■□□□□ 0.91
COCHO43405 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.74■□□□□ 0.91
COCHO43405 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.74■□□□□ 0.91
COCHO43405 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
COCHO43405 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.74■□□□□ 0.91
COCHO43405 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.74■□□□□ 0.91
COCHO43405 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.74■□□□□ 0.91
COCHO43405 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.74■□□□□ 0.91
COCHO43405 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
COCHO43405 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COCHO43405 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COCHO43405 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COCHO43405 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
COCHO43405 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
COCHO43405 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
COCHO43405 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.73■□□□□ 0.91
COCHO43405 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
COCHO43405 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.73■□□□□ 0.91
COCHO43405 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
COCHO43405 AC012618.2-201ENST00000428058 849 ntBASIC20.73■□□□□ 0.91
COCHO43405 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
COCHO43405 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.73■□□□□ 0.91
COCHO43405 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
COCHO43405 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.73■□□□□ 0.91
COCHO43405 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.73■□□□□ 0.91
COCHO43405 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.73■□□□□ 0.91
COCHO43405 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.73■□□□□ 0.91
COCHO43405 AC233702.5-201ENST00000584107 538 ntBASIC20.73■□□□□ 0.91
COCHO43405 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.73■□□□□ 0.91
COCHO43405 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COCHO43405 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
COCHO43405 NBPF21P-201ENST00000425093 1451 ntBASIC20.73■□□□□ 0.91
COCHO43405 SMG8-203ENST00000578922 2178 ntBASIC20.73■□□□□ 0.91
COCHO43405 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.73■□□□□ 0.91
COCHO43405 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
COCHO43405 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COCHO43405 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COCHO43405 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COCHO43405 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COCHO43405 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
COCHO43405 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COCHO43405 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COCHO43405 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
COCHO43405 SNORA78-201ENST00000459373 127 ntBASIC20.72■□□□□ 0.91
COCHO43405 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
COCHO43405 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.72■□□□□ 0.91
COCHO43405 MIR4497-201ENST00000583208 89 ntBASIC20.72■□□□□ 0.91
COCHO43405 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.72■□□□□ 0.91
COCHO43405 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COCHO43405 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.72■□□□□ 0.91
COCHO43405 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms