Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
MSI1O43347 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
MSI1O43347 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
MSI1O43347 AL512408.1-201ENST00000569378 2000 ntBASIC20.82■□□□□ 0.92
MSI1O43347 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
MSI1O43347 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.82■□□□□ 0.92
MSI1O43347 KRT8P17-201ENST00000453110 1448 ntBASIC20.82■□□□□ 0.92
MSI1O43347 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.82■□□□□ 0.92
MSI1O43347 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
MSI1O43347 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.82■□□□□ 0.92
MSI1O43347 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MSI1O43347 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.82■□□□□ 0.92
MSI1O43347 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
MSI1O43347 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.82■□□□□ 0.92
MSI1O43347 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
MSI1O43347 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
MSI1O43347 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
MSI1O43347 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
MSI1O43347 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MSI1O43347 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MSI1O43347 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MSI1O43347 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MSI1O43347 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MSI1O43347 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.81■□□□□ 0.92
MSI1O43347 LINC01006-201ENST00000333319 2292 ntBASIC20.81■□□□□ 0.92
MSI1O43347 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
MSI1O43347 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
MSI1O43347 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
MSI1O43347 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.81■□□□□ 0.92
MSI1O43347 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.81■□□□□ 0.92
MSI1O43347 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.81■□□□□ 0.92
MSI1O43347 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MSI1O43347 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.81■□□□□ 0.92
MSI1O43347 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.81■□□□□ 0.92
MSI1O43347 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
MSI1O43347 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
MSI1O43347 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
MSI1O43347 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
MSI1O43347 AC098590.1-201ENST00000468126 897 ntBASIC20.81■□□□□ 0.92
MSI1O43347 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.81■□□□□ 0.92
MSI1O43347 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.81■□□□□ 0.92
MSI1O43347 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.81■□□□□ 0.92
MSI1O43347 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MSI1O43347 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MSI1O43347 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.81■□□□□ 0.92
MSI1O43347 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MSI1O43347 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MSI1O43347 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
MSI1O43347 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MSI1O43347 HLA-G-202ENST00000376815 851 ntBASIC20.8■□□□□ 0.92
MSI1O43347 HLA-G-203ENST00000376818 1127 ntBASIC20.8■□□□□ 0.92
MSI1O43347 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MSI1O43347 KRT17P3-201ENST00000420566 1262 ntBASIC20.8■□□□□ 0.92
MSI1O43347 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
MSI1O43347 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.8■□□□□ 0.92
MSI1O43347 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.8■□□□□ 0.92
MSI1O43347 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.8■□□□□ 0.92
MSI1O43347 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
MSI1O43347 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.8■□□□□ 0.92
MSI1O43347 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
MSI1O43347 AL391422.3-201ENST00000603791 2761 ntBASIC20.8■□□□□ 0.92
MSI1O43347 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.8■□□□□ 0.92
MSI1O43347 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MSI1O43347 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MSI1O43347 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
MSI1O43347 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MSI1O43347 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MSI1O43347 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
MSI1O43347 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
MSI1O43347 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
MSI1O43347 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
MSI1O43347 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MSI1O43347 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MSI1O43347 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.79■□□□□ 0.92
MSI1O43347 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
MSI1O43347 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.79■□□□□ 0.92
MSI1O43347 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MSI1O43347 RPS2P52-201ENST00000469610 820 ntBASIC20.79■□□□□ 0.92
MSI1O43347 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
MSI1O43347 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
MSI1O43347 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.79■□□□□ 0.92
MSI1O43347 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.79■□□□□ 0.92
MSI1O43347 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
MSI1O43347 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
MSI1O43347 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
MSI1O43347 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
MSI1O43347 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
MSI1O43347 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
MSI1O43347 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MSI1O43347 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
MSI1O43347 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
MSI1O43347 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
MSI1O43347 GABARAPL3-202ENST00000624044 1851 ntBASIC20.78■□□□□ 0.92
MSI1O43347 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.78■□□□□ 0.92
MSI1O43347 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.78■□□□□ 0.92
MSI1O43347 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
MSI1O43347 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MSI1O43347 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
MSI1O43347 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
MSI1O43347 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms